Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01213 | ATGGAGTGGGTTCGAGGGGACCAACTCGGCCGTGGAAATTTTGCCAAAATCAATTTAGCAAAACCAACAAAGGGGTTTGATCAGTTCCCGCCATTAATGGCCGTCAAATCCTCTGTTTCTTCTCTATCCTCTGTTTCGCTCAAGAACGAGAAGCAAATTCTGGATCGAATTGGGATTTGCCCACAGATTGTTACTTGTTTTGGCGATGGAATCAGTGTTGAAAGTGATGGGGAGAAGTGTTATAATCTGTTCTTGGAGTATGCCAATGGCGGAAGTCTTGCGGATGTTGTGAGAATCCATGGCGGTGGGTTGCCGGAATTCGATGTTCGAAGGTACACGAAGGCGATTCTTTGGGGACTCCGGCATGTTCATGGCAATGGGTTTGTTCATTGCGATTTGAAGCTTTCGAATGTGTTGGTTTTTGGGAATGGCGATGTTAAGATCGCTGATTTTGGGCTTGCTAAAGCGGCTGGAAAAATTACGGCGGCGGAAACAGAGGAGCGATTTGAGTGGAGAGGAACTCCGATGTATATGTCGCCGGAGACTGTGAACGGTGGTGAGTATGAGCCGCCGTGTGATATTTGGGCGTTGGGTTGCGCCGTCGTGGAGATGGTGGCTGGAAAGCCGGCGTGGAGGGTTGGGCCGGCAACGGATATATTTGGATTGATGATGAGGATTGGAGTCGGAGACGAAGTACCGGAGATGCCGGAGAATTTATCGGCGGAAGGGAAAGATTTTATCCGGCGGTGTTTGGTCAAGGATCCGAGGAAGAGATGGACGGCGGAGATGCTTTTGAACCACCCATTCGTAGCCGGTGCCGGTGATGCTGTTACATTGAAGGAAGCAGAAGTAGCGACGGAGTCGCCGACGGGTCCTTTCGACTTCCCGGAATTCGTTTGTTCCGAACAGGGTTCTGATGAGTGGAGTTTCTGCTCTTCTAATTCGTCGCCGGAGATTTTGAGTAGGGTCCGGCGGCTGGTGACGGGGAAGCCTTTGGACTGGTCTGTGATGGATAGTTGGGTGACAGTGAGGTGA | 1035 | 50.82 | MEWVRGDQLGRGNFAKINLAKPTKGFDQFPPLMAVKSSVSSLSSVSLKNEKQILDRIGICPQIVTCFGDGISVESDGEKCYNLFLEYANGGSLADVVRIHGGGLPEFDVRRYTKAILWGLRHVHGNGFVHCDLKLSNVLVFGNGDVKIADFGLAKAAGKITAAETEERFEWRGTPMYMSPETVNGGEYEPPCDIWALGCAVVEMVAGKPAWRVGPATDIFGLMMRIGVGDEVPEMPENLSAEGKDFIRRCLVKDPRKRWTAEMLLNHPFVAGAGDAVTLKEAEVATESPTGPFDFPEFVCSEQGSDEWSFCSSNSSPEILSRVRRLVTGKPLDWSVMDSWVTVR | 344 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 25782745 | 25783779 | + | ClCG02G012360.1 | Cla02g01213 | 267339 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01213 | 344 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 1 | 319 | - | - | |
Cla02g01213 | 344 | ProSiteProfiles | Protein kinase domain profile. | 3 | 270 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01213 | 344 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 | 1 | 319 | - | - | |
Cla02g01213 | 344 | SMART | serkin_6 | 3 | 270 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01213 | 344 | Pfam | Protein kinase domain | 5 | 270 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01213 | 344 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 299 | IPR011009 | - | |
Cla02g01213 | 344 | CDD | STKc_MAPKKK | 2 | 270 | - | - | |
Cla02g01213 | 344 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 293 | - | - | |
Cla02g01213 | 344 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 36 | IPR017441 | GO:0005524 | |
Cla02g01213 | 344 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 128 | 140 | IPR008271 | GO:0004672|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla01g01652 | Cla02g01213 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01213 | Cla-Chr2:25782745 | Cla09g00317 | Cla-Chr9:3064267 | 2.58E-64 | dispersed | |
Cla01g01652 | Cla-Chr1:31386507 | Cla02g01213 | Cla-Chr2:25782745 | 7.59E-135 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80346 | PF00069 | Pkinase | 9.60E-51 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01213 | - | - | csv:101214756 | 631.713 |