Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01351 | ATGGCGACTTCGACACTGGGCGGCACCATAGGCTTCTCCCAGCCCTCGTCTTCCTCGCATATCTCAGTTTATTGCATTCCCTTTTCAACCAGCAGATTCAGTTTCTCGAGGACCATTCTTTCTCCTCTCAAGCTTGAAAAACCACCATCTGGAAGAAGAGCCAGAGCTGTAATTGCTGTGAAAATGGCTGCTGAGGCTTTTCAGGAAGTTTTTCCTCCAGCCCTCACTTCAGCTTCAGAACCACCTCCTCTCTTTGATGGAACAACGAGGCTTTACATATCTTATACATGCCCTTATGCGCAGCGTGTGTGGATTACTCGGAATTGTAAGGGTTTGCAGAATAAGATACAATTGGTTCCAATAAATCTACAGGATAGGCCATCTTGGTACATGGAAAAAGTTTACCCACCTAACAAGGTGCCAGCTCTTGAACATAATAATGAGGTCAAAGGAGAGAGTCTTGACTTAATTAAATATATTGACAGCAATTTTGAAGGGCCTTCATTATTTCCTGATGATCCGGGAAAGCGAGAGTTTGCTGAAGAGCTGATAGACTACGTGAACTCTTTCACGAAATCTGTGGTTTCTTCATTTAAAGGAGATGGAAATGAAGCTGATGTGGCATTTGACTACATCGAATCTGCTCTTTCAAAATATGGAGATGGCCCGTTTTTTCTAGGCCAGTTTAGTCTGGTGGATATAGCTTATGCTCCGTTTATTGAAAGGTTTCAGCCGTTCTTATTAGAAGTAAAAACATATGACATCACTGCTGGCAGGCCAAAACTAGCAGCTTGGATTGAGGAGATGAACAAGATCGAAGGGTACCGAAAAACAAGGGGCGATCCACGGGAACATGTTGATAGCTATAAGAAGCGATTCTTGCCGTTTGTGAAAGCCACAGCAGCAGAGGGTCCCATGCCAATGGTTACCTGA | 933 | 43.94 | MATSTLGGTIGFSQPSSSSHISVYCIPFSTSRFSFSRTILSPLKLEKPPSGRRARAVIAVKMAAEAFQEVFPPALTSASEPPPLFDGTTRLYISYTCPYAQRVWITRNCKGLQNKIQLVPINLQDRPSWYMEKVYPPNKVPALEHNNEVKGESLDLIKYIDSNFEGPSLFPDDPGKREFAEELIDYVNSFTKSVVSSFKGDGNEADVAFDYIESALSKYGDGPFFLGQFSLVDIAYAPFIERFQPFLLEVKTYDITAGRPKLAAWIEEMNKIEGYRKTRGDPREHVDSYKKRFLPFVKATAAEGPMPMVT | 310 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 27759167 | 27764342 | + | ClCG02G013730.1 | Cla02g01351 | 267477 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01351 | 310 | SUPERFAMILY | Thioredoxin-like | 78 | 169 | IPR036249 | - | |
Cla02g01351 | 310 | Gene3D | - | 166 | 296 | - | - | |
Cla02g01351 | 310 | CDD | GST_C_Lambda | 173 | 290 | - | - | |
Cla02g01351 | 310 | SFLD | Glutathione Transferase (cytosolic) | 90 | 271 | IPR040079 | - | |
Cla02g01351 | 310 | Pfam | Glutathione S-transferase, C-terminal domain | 208 | 267 | - | - | |
Cla02g01351 | 310 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 87 | 168 | IPR004045 | - | |
Cla02g01351 | 310 | SFLD | Main (cytGST) | 90 | 271 | - | - | |
Cla02g01351 | 310 | PANTHER | GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC | 53 | 294 | - | - | |
Cla02g01351 | 310 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 53 | 294 | IPR044629 | GO:0004364 | |
Cla02g01351 | 310 | SUPERFAMILY | GST C-terminal domain-like | 164 | 293 | IPR036282 | - | |
Cla02g01351 | 310 | Pfam | Glutathione S-transferase, N-terminal domain | 91 | 167 | IPR004045 | - | |
Cla02g01351 | 310 | Gene3D | Glutaredoxin | 62 | 165 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01351 | Cla-Chr2:27759167 | Cla06g01435 | Cla-Chr6:27926213 | 8.61E-08 | dispersed | |
Cla05g01223 | Cla-Chr5:13795738 | Cla02g01351 | Cla-Chr2:27759167 | 1.08E-06 | transposed | |
Cla11g01159 | Cla-Chr11:24296123 | Cla02g01351 | Cla-Chr2:27759167 | 2.50E-32 | transposed | |
Cla10g01965 | Cla-Chr10:35475347 | Cla02g01351 | Cla-Chr2:27759167 | 9.32E-52 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01351 | K00799 | - | csv:101220995 | 525.783 |