Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01354 ATGGGATGGTTTCTCTGTTCTGGAAGTTCGAATAAGAAGGAAAAACATCAGCAGCGGCAGGTTCAGAAGAAGGACGATGATTCGATCCCATCAACTTCAGTATTTGATGATGCCTGGATTATTTACTCTGTCACAAACTTAAGTCAATTCCATTCTACTGATGAAAAATTGATGGTAAAACCGACATTTAATGGGAAGAACGAGGCTCTGAAAGATGGAGGTTCTGATCAAATTGCAGCACAAACAATTACATTCTCATTCCGAGAGTTGGCAGCTGCAACAAAGTATTTTAGAGCCGACTGTCTTTTGGGTGAAGGAGGTTTTGGTCAAGTTTATAAAGGACGATTGGAGAGCATAAATCAGGTAGTTGCCATCAAGCAACTTGATCGAAATGGGCTACAAGGAAACAGGGAATTTCTCGTTGAAGTACTAATGTTAAGCCTACTCCATCACCCAAATCTTGTTAATTTAATTGGCTATTGTGCGGATGGTGATCAAAGACTCCTGGTTTATGAATACATGCCATTGGGATCGTTGGAAGACCATTTACATGATCTCCCACCTGATAAAAGACGACTTGACTGGAATACAAGAATGAAAATAGCTGCTGGTGCTGCAAAGGGCTTAGAGTATTTGCATGACAAAGCTAACCCCCCAGTTATATATCGTGATCTGAAATGCTCTAACATCCTGCTTGGTGAAGATTACCATCCTAAGCTTTCCGATTTTGGCTTGGCAAAATTAGGCCCCGTGGGGGATAACACTCATGTGTCCACAAGAGTGATGGGAACATATGGATACTGTGCTCCTGAGTATGCAATGACAGGCCAGCTCACTTTAAAATCAGACGTTTATAGCTTTGGAGTTGTTCTACTCGAAATTATTACTGGGAGAAAAGCTATTGACAATTCAAGAGCCGCAGGGGAACATAATTTGGTGGCATGGGCTCAACCCTTATTTAAAGACAGAAGGAAATTTTCGCAGATGGCCGATCCATTGCTCCAAGGACAATACCCAGTCAGAGGCTTATATCAAGCTCTTGCAGTAGCTGCAATGTGTGTTCAGGAACAGCCTCATATGCGACCCCTTATTGCTGATGTTGTCACAGCCCTTTCATATCTTGCTTCCCAAAAATACAACCCCGAAACTCAGCCAGTTCAAAGCGCTCGCAGTAGCTTGTCCACACCTAGATCTTCTAGAAGAGAACTGTGA 1212 42.57 MGWFLCSGSSNKKEKHQQRQVQKKDDDSIPSTSVFDDAWIIYSVTNLSQFHSTDEKLMVKPTFNGKNEALKDGGSDQIAAQTITFSFRELAAATKYFRADCLLGEGGFGQVYKGRLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKRRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEDYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSRAAGEHNLVAWAQPLFKDRRKFSQMADPLLQGQYPVRGLYQALAVAAMCVQEQPHMRPLIADVVTALSYLASQKYNPETQPVQSARSSLSTPRSSRREL 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27804754 27809412 + ClCG02G013760.2 Cla02g01354 267480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01354 403 MobiDBLite consensus disorder prediction 382 403 - -
Cla02g01354 403 PANTHER OS07G0668900 PROTEIN 5 400 - -
Cla02g01354 403 CDD STKc_IRAK 103 371 - -
Cla02g01354 403 ProSiteProfiles Protein kinase domain profile. 97 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01354 403 MobiDBLite consensus disorder prediction 382 396 - -
Cla02g01354 403 Gene3D Phosphorylase Kinase; domain 1 70 173 - -
Cla02g01354 403 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 5 400 - -
Cla02g01354 403 SMART serkin_6 97 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01354 403 Gene3D Transferase(Phosphotransferase) domain 1 174 395 - -
Cla02g01354 403 Pfam Protein tyrosine and serine/threonine kinase 102 369 IPR001245 GO:0004672|GO:0006468
Cla02g01354 403 MobiDBLite consensus disorder prediction 12 29 - -
Cla02g01354 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Cla02g01354 403 SUPERFAMILY Protein kinase-like (PK-like) 85 392 IPR011009 -
Cla02g01354 403 ProSitePatterns Protein kinases ATP-binding region signature. 103 126 IPR017441 GO:0005524
Cla02g01354 403 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01354 Cla-Chr2:27804754 Cla05g00626 Cla-Chr5:5770602 0 dispersed
Cla02g02022 Cla-Chr2:35223744 Cla02g01354 Cla-Chr2:27804754 1.10E-35 dispersed
Cla02g02072 Cla-Chr2:35796154 Cla02g01354 Cla-Chr2:27804754 2.65E-72 dispersed
Cla05g02574 Cla-Chr5:36971065 Cla02g01354 Cla-Chr2:27804754 9.13E-67 transposed
Cla10g01964 Cla-Chr10:35470374 Cla02g01354 Cla-Chr2:27804754 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80351 PF07714 PK_Tyr_Ser-Thr 2.30E-46 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01354 - - csv:101221705 704.516