Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01360 ATGTCTTTATTAGTATCAAATTACTATGTTAACTTTGACCCGTTGGTCATATGGGGTGATTGCTGCGCAAAATTGGCAGTAGTTGTTACCAGAGGCGGAGTGGTTGCATGGAGTTGGCTGGTGCTGTGGTTGGAGTTGGTTGACAATTGGGTGGTGACCGTCAAGGATTTTTGTAAAGAGTCAGATGGCAATCGTGTGGTAGCAAAGAACGATCTGAAAGAGGAAGAAGAAGAAGAAGTGATGATGTTGGATCTCAACGATTCGATTATGAACCGTGACGAAACGACGGCGGAGCGGATCGTAATGGAAGATTCAGAGACTTCAAATTCCTCCGTTGTTAATGCTGCCGACGAGGTTTCCAATAGCAGAGATGAGGATTCCTCTGTTTTAATCTTCGATATTCTCAAAAGGGAAAGTTCCGGCGGCGGCAGCGGCGGCGGCGCGTCCTCGGAATTGGTGACTCAGACACTTTTTCCGGTGGTTGGAGGATGGGGGGATTCTGGGTCTTCAGTGCCCAGAACCCATTGGTTGAACTTGTCGTCGACGGCGGATTCCGGCGGCGGCGGTGGACAGCCGGAGTTGAGAATTGTGCAGCAGAAACAGCAGCAGGTGAGGAAGAGCCGCCGTGGGCCGCGCTCCCGGAGCTCGCAGTACCGAGGAGTTACCTTTTATCGGCGAACTGGAAGATGGGAATCTCATATTTGGGCTTATGATCGAGCAGCAATAAAGTTTAGAGGAGTCGATGCAGACATAAACTTCAACATAAGTGATTACGATGAAGATATGAAACACATGAAGAATCTAAGCAAAGAAGAGTTTGTGCATGTTCTTCGTCGACAAAGCACTGGATTTTCTCGTGGAGGATCGAAACTAAGAGGACTTTCTCTTCAAAAATATGGAAGATGGGAAAATCAAATGAGCCAAATTATTGGGAAGAATGGAATTGAGCAGAGGTCTTACAAAGGGGAAACAATGGTGGATGCAAGCAATGGAGGCAATGGGCATAATCTTGATCTGAGCATTGGAGGAATTTTCAACTACCATTTTAGTAATTCTCCTCAAAAACTCAACATTGAGAGACCAAAGAATGAAAACAATGGTTATGCATGTGGTGTGGCTGGCCAACAACCTCATATTCCTCCTTCTATGTGGTCTAGTTTTTACTCTGGTTTTTTAGCAGATAATGAGGAAAGAGAGAGAGAAAAGAGAAACGACTCAACGAAGAGCCCTACAAGTTGGGGATGGCAAATGCCAACGTCGACGTCGATGTCTATATCAATGCCAATGCAAATTCAAGGAAATATGAGTGGAAAAAGCAATTACAAGAATAATAATAACAATAACAATAATAATAATATGAGTAGTAATGGAATAATAGCAAGAGAAGAAGCTCATGTTTCCAAGATTGCAGCATCATCAGGATTCTCTTCCTCTTCTAATTTTGGTTCACTTTATGCCCAAAACAACACTGCCCTCCACAGTACTCACTGCCCCAATATTTCTTGA 1506 44.22 MSLLVSNYYVNFDPLVIWGDCCAKLAVVVTRGGVVAWSWLVLWLELVDNWVVTVKDFCKESDGNRVVAKNDLKEEEEEEVMMLDLNDSIMNRDETTAERIVMEDSETSNSSVVNAADEVSNSRDEDSSVLIFDILKRESSGGGSGGGASSELVTQTLFPVVGGWGDSGSSVPRTHWLNLSSTADSGGGGGQPELRIVQQKQQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWAYDRAAIKFRGVDADINFNISDYDEDMKHMKNLSKEEFVHVLRRQSTGFSRGGSKLRGLSLQKYGRWENQMSQIIGKNGIEQRSYKGETMVDASNGGNGHNLDLSIGGIFNYHFSNSPQKLNIERPKNENNGYACGVAGQQPHIPPSMWSSFYSGFLADNEEREREKRNDSTKSPTSWGWQMPTSTSMSISMPMQIQGNMSGKSNYKNNNNNNNNNNMSSNGIIAREEAHVSKIAASSGFSSSSNFGSLYAQNNTALHSTHCPNIS 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27922666 27930220 + ClCG02G013820.1 Cla02g01360 267486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01360 501 MobiDBLite consensus disorder prediction 431 455 - -
Cla02g01360 501 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED 82 235 - -
Cla02g01360 501 SUPERFAMILY DNA-binding domain 216 256 IPR016177 GO:0003677
Cla02g01360 501 SMART rav1_2 217 260 IPR001471 GO:0003700|GO:0006355
Cla02g01360 501 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 236 488 - -
Cla02g01360 501 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 82 235 - -
Cla02g01360 501 MobiDBLite consensus disorder prediction 395 417 - -
Cla02g01360 501 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED 236 488 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01360 Cla-Chr2:27922666 Cla02g02027 Cla-Chr2:35285902 4.18E-53 dispersed
Cla10g01959 Cla-Chr10:35434753 Cla02g01360 Cla-Chr2:27922666 1.42E-46 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01360 K09284 - csv:101204131 666.381