Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01395 | ATGTTTCTGGCTATGGCTTCTAGTTCTCGGTACTCGATCTTGCCTCCAATCTGCTCGGAGCTGCTGTCTTTTCATTTCTTAAAGAGGAATATGTCTCGGAAATCCCAGGTGATGGTTTCATTGCAACCCACCAAATCCATGCCAGTTAATTCTCGGTTCATGATTCCACAAGCTGCTGAAACTTTGGAAGAGCCTTATAATCGGAATGCGAAAACCATGGAAGCTAATTCGATAGTTGACAGTGAAAATGGTGCTGCTGGAGATGATGCTGTCAATGGACTCCAATGCAGTATGAACAATATTGATGAGCTGAATGAGGACTCACCATACAATTACAATATTACAACAGTGGAAGAAAGACCCACCATGGATGATGGAGAAGATGGTTTTATGCCTTTACCTTCACCTTCAATGTCGGCTTCACATAGCGAACGCAGGTGGGGTGACACATCCTCCTACACGCCAAGGAAGATACTTCAGTCTTGGTTTAAACTTCCAAATGGGAATTGGGATCTTGTCAAGATACTATCGACGACAGGAACAGAGTCAGTAGTTTCACTGACTGATGGAAAGGTGTTAAAGGTGAAAGCTGAAAGTTTGATTCCTGCAAATCCGGATATTCTTGATGGTGTTGATGATCTTATGCAACTTAGCTATTTAAATGAGCCTTCAGTATTATATGATCTTGAGTACAGATATAATCAAGATATTATATATACAAAAGCAGGACCAGTTCTGGTTGCTATCAATCCTTTTAAGAAAGTTGATTTGTATGGAAACGATTACATTGATGCATACAAGCGCAAAACAGTTGATAGCCCGCACGTATATGCCATTACCGATACAGCCATAAGAGAGATGATTCGAGATGAAGTAAATCAATCAATTATAATAAGCGGTGAAAGTGGAGCTGGGAAAACTGAAACAGCAAAGATAGCAATGCAATATTTGGCCGCTCTTGGTGGTGGAAGTGGAATAGAATATGAGATACTAAAGACCAATCCTATCTTAGAAGCTTTTGGAAATGCAAAAACATTGAGAAATGATAACTCAAGCCGTTTTGGAAAGTTGATAGAAATCCATTTTAGTGAAACTGGGAAAATATCTGGTGCAAATATTCAAACTTTTTTGCTTGAAAAGTCTAGAGTTGTCCAATGCACGGAGGGAGAGAGGTCATACCACATCTTTTATCAACTATGTAGTGGGGCTTCGCCTACACTTAAAGAGAAGCTAAACTTGAGAAGAGCGGAAGAGTACAAATATCTCTCCCAGAGCAGTTGTTTTTCAATAAGTAGAGTAAATGATGCCGAGGAGTTTCGTGTGGTCATGGAAGCACTAGATGTCGTCCATATCAGCAAAGAAGATCAGCACAGTGTATTTGCAATGCTTGCTGCTGTTCTATGGCTGGGAAATGTTTCCTTTAGTGTTATAGACAATGAGAATCATGTGGAGGCTGTGGAAGATGAAGGTTTACAGACTGTTGCTAAACTGATTGAGTGTGAGATTGAGGAGCTTAAACTAGCTTTATCAACTAGAAAAATGAGAGTTGGGAATGACAGCATTGTCCAAAAGCTTACTTTATCTCAGGCAAGAAACTTGTTCAGGAAAACCTCTTACTTTATATTGTGTATAAGCGAGAAACTAATTCCCATCAACAAACTACATGCAATTGACACAAGAGATGCATTGGCAAAGTCAATTTACGCTTGTTTGTTTGAGTGGCTGGTCGAACAAATTAACAAATCTCTTTCTGTAGGCAAACGACGCACTGGCAGATCCATCAGCATTCTTGATATTTATGGCTTTGAATCGTTTGATAGAAATAGTTTTGAACAGTTCTGTATTAACTATGCGAACGAGAGACTACAGCAGCATTTCAATCGTCATTTATTTAAGCTAGAGCAGGAGGAATATATTCAAGATGGCATCGATTGGGCAAAAGTTGATTTTGACGACAACCAAGATTGTCTCAGTCTGTTTGAAAAGAAACCTTTGGGATTGTTGTCCCTGTTAGATGAGGAGTCTACTTTTCCAAACGGTACAGATCTGACCTTCGCGAACAAGCTTAAGCAGCATTTGGGTCCTAATTCTTCTTTTAGAGGAGAACGAGGGAAAGGCTTCACTGTCTATCATTATGCAGGAGAGGTCACTTACGACACAACTGGTTTTCTGGAGAAAAACAGGGACTTGCTACATTTAGATTCGATTCAACTCCTATCCTCATGCTCATGCCATCTCCCTCAGATTTTTGCATCCAACATGCTAACTCAATCGGAAAAGTCCATAGGTGGCACTTTACACAAGTCTGGTGGTGCAGAATCCCAAAAACTAAGTGTTGCAAGAAAGTTTAAGGGTCAATTATTCCAATTGATGCTCCGTCTTGAAAATACAACACCCCATTTTATCCGTTGCATCAAGCCCAACAACGTTCAGTCTCCCAGATTGTATGAGCAAGGACTTGTATTACAACAGTTAAGATGTTGTGGGGTCCTAGAAGTGGTACGAATATCACGAGCTGGTTTTCCTACCCGGATGTCACATCAGAAATTTGCTAGAAGGTATGGTTTCCTTCTACAAGAAAACATTGCATCACAGGATCCCCTAAGTGTCTCTGTCGCAATTCTTCATCAATTCAATATATTGCCTGAAATGTACCAAGTTGGCTATACAAAATTGTTTTTCCGAACTGGGCAGATTGGAGTGCTTGAAGATACAAGAAACCGCACCCTCCATGGGATTCTCTCTGTTCAAAGCTGTTATAGAGGGCATCTGGCTCGACGCCACCTCAAAGAGCTAAAGAGAGGGATTTCCGTGCTTCAGTCATTTGCACGTGGGGAGAAAGCAAGAAAAGAATATGCAATCTTGATGCAAAGACATAGGGCTGCTATTTCTATTCAAAAGTGTGTGAAAGCCAGAATTGCTAGTAAACGTTTGAAGAAAGTCTGTGATGCATCACTTACGATACAATCGGTTATCCGTGGCTGGTTGGTCAGGAGATGCTCAGGGGATATAGGTTTAATGAAACCTGGTGGCCTGACGGCAAATGGGTCAGGTGAGGTGCTTGTTAAGTCATCATTCCTTGCAGAATTACAACGCCGTGTCCTGAAGGCCGAGGCTGCTTTGCGAGAGAAAGAAGAGGAAAACGACATCCTCCATCAACGTCTCCAACAGTATGAGAACCGTTGGTCAGAGTATGAGCTGAAAATGAAGTCAATGGAAGAGGTGTGGCAGAGACAAATGAGATCCCTGCAGTCTAGCCTCTCCATTGCAAAGAAAAGCCTAGCAGTTGATGATTCAGAAAGAAATTCTGATGCATCGGTGAACGCAAGCGATGACAGAGGATACAGTTGGGAAGTGGGTAGCAACAACACAGCTAATGAAAGCAATGGAGTAAGACCAATGAATGCAGGTCTCAGCGTCATTAGCCGATTGGCTGAAGAATTCGAACAAAGAAGTCAAGTGTTTGGCGATGATGCAAAGTTCTTGGTAGAGGTAAAATCCGGTCAAGTTGAGGCAAGTCTTGACCCAGATAGGGAACTTAGAAGGTTGAAGCAAATGTTTGAAGCATGGAAGAAAGATTACGGGGGAAGGCTGCGCGAAACGAAAGTGATTTTGAATAAGCTTGGAAATGAAGGTGCCATGGATAGGGTGAAAAAGAAATGGTGGGGAAGAAGGAACAGCACAAGCAACGCTATAGTTGCAAAGGGGAGGAACTGCTGGAAGAGTTCTGTTCTAATTTTTCCATTACAATTTTTTTGA | 3759 | 41.5 | MFLAMASSSRYSILPPICSELLSFHFLKRNMSRKSQVMVSLQPTKSMPVNSRFMIPQAAETLEEPYNRNAKTMEANSIVDSENGAAGDDAVNGLQCSMNNIDELNEDSPYNYNITTVEERPTMDDGEDGFMPLPSPSMSASHSERRWGDTSSYTPRKILQSWFKLPNGNWDLVKILSTTGTESVVSLTDGKVLKVKAESLIPANPDILDGVDDLMQLSYLNEPSVLYDLEYRYNQDIIYTKAGPVLVAINPFKKVDLYGNDYIDAYKRKTVDSPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCTEGERSYHIFYQLCSGASPTLKEKLNLRRAEEYKYLSQSSCFSISRVNDAEEFRVVMEALDVVHISKEDQHSVFAMLAAVLWLGNVSFSVIDNENHVEAVEDEGLQTVAKLIECEIEELKLALSTRKMRVGNDSIVQKLTLSQARNLFRKTSYFILCISEKLIPINKLHAIDTRDALAKSIYACLFEWLVEQINKSLSVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFDDNQDCLSLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLGPNSSFRGERGKGFTVYHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCSCHLPQIFASNMLTQSEKSIGGTLHKSGGAESQKLSVARKFKGQLFQLMLRLENTTPHFIRCIKPNNVQSPRLYEQGLVLQQLRCCGVLEVVRISRAGFPTRMSHQKFARRYGFLLQENIASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILSVQSCYRGHLARRHLKELKRGISVLQSFARGEKARKEYAILMQRHRAAISIQKCVKARIASKRLKKVCDASLTIQSVIRGWLVRRCSGDIGLMKPGGLTANGSGEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYENRWSEYELKMKSMEEVWQRQMRSLQSSLSIAKKSLAVDDSERNSDASVNASDDRGYSWEVGSNNTANESNGVRPMNAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLDPDRELRRLKQMFEAWKKDYGGRLRETKVILNKLGNEGAMDRVKKKWWGRRNSTSNAIVAKGRNCWKSSVLIFPLQFF | 1252 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 28425973 | 28443684 | + | ClCG02G014140.2 | Cla02g01395 | 267521 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01395 | 1252 | PRINTS | Myosin heavy chain signature | 239 | 258 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla02g01395 | 1252 | PRINTS | Myosin heavy chain signature | 646 | 674 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla02g01395 | 1252 | PRINTS | Myosin heavy chain signature | 293 | 318 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla02g01395 | 1252 | PRINTS | Myosin heavy chain signature | 335 | 362 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla02g01395 | 1252 | PRINTS | Myosin heavy chain signature | 593 | 621 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla02g01395 | 1252 | SMART | MYSc_2a | 203 | 908 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla02g01395 | 1252 | SMART | iq_5 | 908 | 930 | IPR000048 | GO:0005515 | |
Cla02g01395 | 1252 | SMART | iq_5 | 980 | 1002 | IPR000048 | GO:0005515 | |
Cla02g01395 | 1252 | SMART | iq_5 | 957 | 979 | IPR000048 | GO:0005515 | |
Cla02g01395 | 1252 | SMART | iq_5 | 931 | 953 | IPR000048 | GO:0005515 | |
Cla02g01395 | 1252 | Gene3D | - | 391 | 447 | - | - | |
Cla02g01395 | 1252 | ProSiteProfiles | IQ motif profile. | 932 | 961 | IPR000048 | GO:0005515 | |
Cla02g01395 | 1252 | MobiDBLite | consensus disorder prediction | 1098 | 1131 | - | - | |
Cla02g01395 | 1252 | PANTHER | P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN | 42 | 531 | - | - | |
Cla02g01395 | 1252 | PANTHER | P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN | 554 | 1227 | - | - | |
Cla02g01395 | 1252 | Coils | Coil | 1027 | 1075 | - | - | |
Cla02g01395 | 1252 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 448 | 582 | - | - | |
Cla02g01395 | 1252 | Gene3D | - | 841 | 908 | - | - | |
Cla02g01395 | 1252 | Gene3D | - | 960 | 1001 | - | - | |
Cla02g01395 | 1252 | Gene3D | - | 913 | 959 | - | - | |
Cla02g01395 | 1252 | Pfam | Myosin head (motor domain) | 211 | 895 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla02g01395 | 1252 | ProSiteProfiles | IQ motif profile. | 911 | 937 | IPR000048 | GO:0005515 | |
Cla02g01395 | 1252 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 182 | 955 | IPR027417 | - | |
Cla02g01395 | 1252 | Gene3D | - | 605 | 797 | - | - | |
Cla02g01395 | 1252 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 156 | 205 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cla02g01395 | 1252 | CDD | MYSc_Myo8 | 223 | 895 | IPR036022 | - | |
Cla02g01395 | 1252 | ProSiteProfiles | Myosin motor domain profile. | 209 | 907 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cla02g01395 | 1252 | PANTHER | MYOSIN | 42 | 531 | - | - | |
Cla02g01395 | 1252 | Gene3D | Kinesin motor domain | 208 | 840 | IPR036961 | - | |
Cla02g01395 | 1252 | PANTHER | MYOSIN | 554 | 1227 | - | - | |
Cla02g01395 | 1252 | MobiDBLite | consensus disorder prediction | 1115 | 1131 | - | - | |
Cla02g01395 | 1252 | Pfam | IQ calmodulin-binding motif | 914 | 930 | IPR000048 | GO:0005515 | |
Cla02g01395 | 1252 | Pfam | IQ calmodulin-binding motif | 934 | 952 | IPR000048 | GO:0005515 | |
Cla02g01395 | 1252 | Pfam | IQ calmodulin-binding motif | 984 | 999 | IPR000048 | GO:0005515 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01395 | Cla-Chr2:28425973 | Cla11g01804 | Cla-Chr11:31704159 | 0 | dispersed | |
Cla02g01395 | Cla-Chr2:28425973 | Cla05g00393 | Cla-Chr5:3553666 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01395 | - | K10357 | csv:101222101 | 2198.7 |