Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01451 ATGGCTACCAATAATCTAAACAAAGAGCTGTCAAAGAAAACAAACATATTTGGACTAAAAGTATGGGAAGTGATTGGAATTGGAGTAGGCCTATTCATAATCTCAATCCTCTGTATACTCTCACTATGTTTAACCTCATTCAACAAGAAGTCAAAAAAATCATCATCATCATCACCCAACTCCAACACCTTATTCCCTCTCACTCAAATCCCATCTCATTCAAAAGACATAAAGGCAGTTCACATAACAACTACTCACAAAAAGCCAACAACTCAAATGGGAAAATTTGAAACCAATAATAATTACAGCAGTGAATCGGGATCATTGTTTCAACCATTGGGTTATGGCTATGGATCACAATCAGGGGATGAAGGCAGCTCGGGCACCATCACGACGACAACAATGTACCGACGTTCGACGTCGCCTACTACGACGATGGCTCCTTCGCCGTTGTCGTGTATGCCGGAGATGTCGCAATTGGGGTGGGGGTATTGGTTTACTTTGAGAGAGCTGGATTTGGCTACTAATTTGTTCTCAGAAGAGAATTTGATTGGAGAAGGAGGGTATGGAGTTGTGTTTAGAGGGAAGTTGTTGAATGGGACACCAGTGGCAGTTAAGAAGATTTTTAATGGACAGGGCCAAGCTGAGAAGGAATTCAGAGCGGAAGTTGAGGCAATTGGGCATGTAAGACATAAGAATCTTGTTCGTCTTTTGGGATATTGCATTGAAGGGACTCACAGGATGCTGGTGTATGAGTATATAAACAATGGAAGCTTAGAGCTATGGCTACATGAAGGAATGGGAGAGAATAGATATCTTACATGGGAGGCTCGAATGAAGATCATGTTGGGGACAGCCAAAGGGATTGCATACTTACACGAAGCCATTGAGCCAAAGGTGGTACATCGAGACATAAAGGCTAGCAACATACTTATAGATGAAAATTTCAATGCTAAAGTATCAGATTTTGGGCTAGCAAAGTTGATGGATGCTGGCAAAACTCATGTCACAACAAGAGTTATGGGTACATTTGGTTATGTGGCTCCTGAATATGCTAACACTGGACTTCTAAATGAGAAGAGCGACGTGTATAGCTTTGGAGTTGTGCTGGTGGAAACAATCACCGGAAGAGATCCAGTGGACTATGGACGTCCGCACAAACAGGTGAATGTAGTAGATTGGCTGAAAATGATGATTGGAAGTAGAAGATGTGAAGAAGTGGTAGACACAAAATTAGGGGTTGGAGGAAGGCCATCCACAAGAGGGTTGAAAAGAGTTCTATTGGTTGCATTAAGATGTGTGGATCCTGATTATGACAAGAGACCAAAAATGGGCCACGTTGTTAGAATGCTTGAATCTCAAGATCATCATTATAATTCTTCTCGTACACCTTCTACTACTACTATTTAA 1410 41.56 MATNNLNKELSKKTNIFGLKVWEVIGIGVGLFIISILCILSLCLTSFNKKSKKSSSSSPNSNTLFPLTQIPSHSKDIKAVHITTTHKKPTTQMGKFETNNNYSSESGSLFQPLGYGYGSQSGDEGSSGTITTTTMYRRSTSPTTTMAPSPLSCMPEMSQLGWGYWFTLRELDLATNLFSEENLIGEGGYGVVFRGKLLNGTPVAVKKIFNGQGQAEKEFRAEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYINNGSLELWLHEGMGENRYLTWEARMKIMLGTAKGIAYLHEAIEPKVVHRDIKASNILIDENFNAKVSDFGLAKLMDAGKTHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLVETITGRDPVDYGRPHKQVNVVDWLKMMIGSRRCEEVVDTKLGVGGRPSTRGLKRVLLVALRCVDPDYDKRPKMGHVVRMLESQDHHYNSSRTPSTTTI 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29062092 29067194 + ClCG02G014680.1 Cla02g01451 267577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01451 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672|GO:0006468
Cla02g01451 469 ProSiteProfiles Protein kinase domain profile. 178 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01451 469 CDD STKc_IRAK 184 452 - -
Cla02g01451 469 PANTHER OS01G0323000 PROTEIN 6 462 - -
Cla02g01451 469 SMART serkin_6 178 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01451 469 Gene3D Transferase(Phosphotransferase) domain 1 254 465 - -
Cla02g01451 469 PANTHER OS01G0323000 PROTEIN 6 462 - -
Cla02g01451 469 SUPERFAMILY Protein kinase-like (PK-like) 151 456 IPR011009 -
Cla02g01451 469 Pfam Protein kinase domain 179 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01451 469 Gene3D Phosphorylase Kinase; domain 1 154 253 - -
Cla02g01451 469 ProSitePatterns Protein kinases ATP-binding region signature. 184 207 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01451 Cla-Chr2:29062092 Cla02g01803 Cla-Chr2:33065120 0 dispersed
Cla02g01451 Cla-Chr2:29062092 Cla06g00395 Cla-Chr6:4846508 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80352 PF00069 Pkinase 9.40E-48 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01451 - - cmo:103493978 782.326