Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01456 ATGGAAAAAGGAGATAATATTACAGCATTAATAGGGATGATTGTATTGCAAATATGCTATGCTGGTATAAATATTATCTCAAAGCTTGCCATGCAATCTGGAATGAACCCTCTTGTTCTTCTCACTTATAGACAGATTTTTGGCACTTTGGCCATTGCTCCTTTTGCCTTCTTTACTGAAAGGAAAACCAGGCCAAAGATTACTTTTACAGTTCTGATTCAAATCTTTGCGTGTTCCTTATCAGGAGCAACAGGAAACCAGATATTCTTCTTTGTTGGGTTGAAGTACACAAACCCAACAATTTCGAGTGCTATGGCCAATGTTCTTCCAGCTGCTACTTTTATTCTTGCTGTTCTTTTCAGACAAGAGAGTGTGAGAATCAAGACCAAGTCTGGTTTTGCAAAGGTAATAGGGACAATTGTGTGTGTATGTGGGGCAATGCTGCTGTCTTTCTACCATGGACACACCATTGACTTAGGTGAATCAAAAATTCACTGGCCATATGTTGAGAAAATGATCAAGGAAACAAACCCGGCCAACCATCAAGGAAACCGTGTCCTCGGCTCCATTTTGTTGCTCTTCAGCTCTTTTGCTTGGGCATTATGGTTTGTCATCCAAGCAAGATTGAGTGTGAAGTTCAAAGCTCCCTATACAAGTACTGCATTGTTGTGCTTCATGGCCTTTTTCCAATGTGGACTCATAGCTGTGATTTCAGAGCACAATATTGCTGCTTGGTCTTTGAAAAGTACGATCCGACTCGTTGCAGCTCTTTACGCGGGAGTTGTGTGCTCTGGATTGACATTTAGCATAACTTCATGGATTATACAAAGGAAAGGCCCTCTCTATGTCTCCATTTTCACCCCTTTATTGCTTATCATTGTGGCCATCGTTAGCTGGACTCTCCTCCATGAACAACTCTACGTGGGAACTGTTATTGGGTCTATTTTGATAATCATTGGGCTTTATGCTGTGCTATGGGGAAAATCCAAAGAGATGAAAGTAGAAGATGATCATGACAACATGGAAAAACCAAGAATAGAGAAGCCAAATGGAAATGGGAGTCATATTATTGAGGAGAAGGATGACATGGAATTGCAAATCACATACATCAAATAA 1116 40.41 MEKGDNITALIGMIVLQICYAGINIISKLAMQSGMNPLVLLTYRQIFGTLAIAPFAFFTERKTRPKITFTVLIQIFACSLSGATGNQIFFFVGLKYTNPTISSAMANVLPAATFILAVLFRQESVRIKTKSGFAKVIGTIVCVCGAMLLSFYHGHTIDLGESKIHWPYVEKMIKETNPANHQGNRVLGSILLLFSSFAWALWFVIQARLSVKFKAPYTSTALLCFMAFFQCGLIAVISEHNIAAWSLKSTIRLVAALYAGVVCSGLTFSITSWIIQRKGPLYVSIFTPLLLIIVAIVSWTLLHEQLYVGTVIGSILIIIGLYAVLWGKSKEMKVEDDHDNMEKPRIEKPNGNGSHIIEEKDDMELQITYIK 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29106269 29110874 + ClCG02G014730.2 Cla02g01456 267582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01456 371 PANTHER WAT1-RELATED PROTEIN 9 342 IPR030184 GO:0016021|GO:0022857
Cla02g01456 371 PANTHER WAT1-RELATED PROTEIN 9 342 - -
Cla02g01456 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Cla02g01456 371 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Cla02g01456 371 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020|GO:0016021
Cla02g01456 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01070 Cla-Chr1:16934707 Cla02g01456 Cla-Chr2:29106269 3.61E-138 dispersed
Cla02g01456 Cla-Chr2:29106269 Cla11g01284 Cla-Chr11:26371717 4.68E-86 dispersed
Cla03g00597 Cla-Chr3:6898308 Cla02g01456 Cla-Chr2:29106269 3.87E-48 dispersed
Cla02g01456 Cla-Chr2:29106269 Cla04g00594 Cla-Chr4:19981693 4.76E-84 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01456 - - csv:101217670 648.277