Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01484 ATGGGAGGTTTGAGTGAGGGTCTAACACAGTTGCTGATACCTGCTGCTGCTCTGCTTGGTATTGGATTTGCCCTTCTTCAATGGCTTTTGGTTTCAAGAGTTAAGGTTTCTAGCTACCCTGATGATGAAAGCCAAGAAAACAACTTGATTGAAGGAGGACAAGAGGAAGGTATTGATGATGTCGAGGTTCTCGCAAAGTGTGCCGAAATCCAGAAGGCAATTTCTGTTGGAGCAACCTCATTTTTATTCACCCAGTATAAATACCTTGTTGTCTTCATGGGAGTATTTGGAGTCATCATTTTTCTGTTTCTTGGTTCTGTTAAGAGATTCAGCACCAAAAGTGAACCTTGCACATACAACAAGGGACAGATGTGTAAACCAGCTCTAGCCAATGCCATTTTTAGCACAATTGCCTTCTTGCTAGGTGCTCTCACCTCAGTTCTATCTGGTTTCCTTGGAATGAAGATTGCAACTTATGCCAATGCACGAACGAGTCTAGAAGCACGGAAAGGCATTGGAAGAGCATTCGTTATTGCTTTTCGCTCCGGTGCTGTGATGGGATTCCTTCTAGCTGCCAATGGCCTCCTTGTTTTATATGCCTCCATCAATTTGTTTAAGCTGTATTATGGCGATGATTGGGAAGGACTGTACGAATCTATCACCGGCTACGGTCTTGGAGGTTCTTCAATGGCGCTTTTTGGAAGAGTTGGGGGCGGCATATACACAAAAGCAGCTGATGTTGGAGCTGATCTTGTAGGGAAAATTGAAAAGAATATTCCTGAAGACGATCCACGAAATCCTGCTGTCATAGCTGACAATGTGGGTGACAATGTAGGAGATATTGCAGGAATGGGATCTGACTTATTTGGATCTTATGCAGAATCAACCTGTGCTGCACTTTTCGTGGCATCGATATCGTCCTTCGGCTTTACACATAATTATGCAGCCATGTCCTACCCTCTACTTGTAAGCTCAATGGGAATTGTGATTTGCTTAATAACTACACTTTTTGCAACTGACCTCATTGAGATTAAGAAAGTGAGCGAAATCGAACCGTCATTAAAACGACAACTTCTTATCTCCACCGTGCTGATGACAGTAGGGGTAGCTTTAGTTAGCTTCATTGCTTTGCCTTCAAAATTCACTCTTTACGATTTCGGCATCGATAAGGTCGTAAAGAACTGGCACATTTTCTTTTGTGTGGTGACAGGATTGTGGGCAGGACTTGTTATTGGGTACACAACTGAGTATTACACTAGCAATGCTTACAGTCCAGTGCAGGATGTGGCTGATTCTTGCAGAACCGGTGCCGCAACGAACGTAATATTTGGATTAGCTCTCGGTTACAAATCCGTCATCATTCCCATATTTTCAATCGCTTTATCCATTTACGTGAGCTTCCGCTTGGGAGCCATGTATGGTATTGCAATGGCTGCTTTGGGAATGCTTAGCACCATTGCCACTGGTCTAGCCATTGATGCTTATGGTCCAATAAGTGATAATGCAGGTGGAATAGCCGAAATGGCTGGAATGAGCCACGAGATACGCGAAAGAACCGATGCTTTAGATGCTGCAGGAAACACGACTGCAGCCATCGGAAAGCCGAGCAGGCATCGAAACAGTCAACGTCATGAACCCGAAAGTCTTCATTGGGTTGATAGTGCAATGCTTCCATACTGGTTTTCAGCCATGACAATGAAGAGTGTTGGGAGTGCAGCACTGAAGATGGTGGAGGAAGTTCGACGACAATTCAACTCCATCCCAGGGCTGATGGAAGGCAGGACGAAGCCGGACTATGCAAATTGTGTGAGGATATCGACCGATGCTTCGCTTAGGGAGATGATCCCACCTGGTGCTCTTGTTTTGGTAACACCACTCATTGCTGGAACATTCTTTGGAGTTGAAACTCTTGCTGGACTTCTGGCTGGTTCCCTTGTTTCTGGAGTGCAGGTTGCTATCTCTGCTTCAAACACAGGTGGGGCTTGGGATAATGCAAAAAAGTACATAGAGGCAGGAAGAAGTGAACATGCTAAAGCACTTGGTCCTAAAGGGTCAGATGCTCACAAGGCAGCTGTGATAGGGGACACAATTGGGGATCCTCTCAAAGACACTTCTGGCCCATCACTTAATATTCTCATCAAGCTTATGGCTGTTGAGTCTTTGGTTTTTGCCCCTTTTTTTGCTGCTCATGGTGGCCTCATCTTCAACCATATATAA 2217 44.84 MGGLSEGLTQLLIPAAALLGIGFALLQWLLVSRVKVSSYPDDESQENNLIEGGQEEGIDDVEVLAKCAEIQKAISVGATSFLFTQYKYLVVFMGVFGVIIFLFLGSVKRFSTKSEPCTYNKGQMCKPALANAIFSTIAFLLGALTSVLSGFLGMKIATYANARTSLEARKGIGRAFVIAFRSGAVMGFLLAANGLLVLYASINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKIEKNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESTCAALFVASISSFGFTHNYAAMSYPLLVSSMGIVICLITTLFATDLIEIKKVSEIEPSLKRQLLISTVLMTVGVALVSFIALPSKFTLYDFGIDKVVKNWHIFFCVVTGLWAGLVIGYTTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFSIALSIYVSFRLGAMYGIAMAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHEIRERTDALDAAGNTTAAIGKPSRHRNSQRHEPESLHWVDSAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNSIPGLMEGRTKPDYANCVRISTDASLREMIPPGALVLVTPLIAGTFFGVETLAGLLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGRSEHAKALGPKGSDAHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLIFNHI 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29357671 29365124 + ClCG02G015000.1 Cla02g01484 267610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01484 738 PIRSF H+-PPtase 552 736 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cla02g01484 738 PIRSF H+-PPtase 19 537 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cla02g01484 738 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 553 736 - -
Cla02g01484 738 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 5 534 - -
Cla02g01484 738 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 553 736 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cla02g01484 738 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 5 534 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cla02g01484 738 Pfam Inorganic H+ pyrophosphatase 41 535 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cla02g01484 738 Pfam Inorganic H+ pyrophosphatase 555 723 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cla02g01484 738 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 9 534 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cla02g01484 738 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 728 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01484 Cla-Chr2:29357671 Cla06g01171 Cla-Chr6:24855454 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01484 K23025 - csv:101205277 1331.24