Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01490 ATGGCTCATACCAGCAATACTGCAGCTGGAGTTGATAACACCTTTAGAAGGAAATTTGATCGGGAGGAGTATTTGGAACGAGCTCGTGAGCGTGAAAAACAGGAGGTTGAGAGGGTTAAGTCCAAATTGAAAGGTCCACCAGTGCAAAGAAAACCATTGAAACATAGAGATTACGAGGTAGACCTTGAGTCCCGATTGGGAAAAACCCAGGTTGTCACTCCAGTTGCACCTCTAAGCCAGCAGGCTGGATACTACTGTTCTGTTTGTGAATGTGTAGTCAAGGATTCCGCAAATTACTTGGATCATATCAATGGAAAGAAACATCAGAGAGCCTTGGGTATGTCCATGCGGGTAGAACGGGCATCTCTTGAACAGGTGCAGGAGCGGTTTGAAGTTCTTAAAAAGAGAAAAACGCCAGGAAGCTTCACAGAGCAAGATCTTGAAGAGCGTATACTAAAGCAACAACAAGAAGAAGAACAACGAAAGCGTGAGCGACGAGAAAGGAAGAAAGAAAAGAAGAAAGAGAAGGCTGCAGAAGAGGAACCTGAAGTAGATCCTGATGTTGCAGCAATGATGGGATTTGGAGGCTTCCGTTCATCAAAGAAGTGA 609 44.66 MAHTSNTAAGVDNTFRRKFDREEYLERAREREKQEVERVKSKLKGPPVQRKPLKHRDYEVDLESRLGKTQVVTPVAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRVERASLEQVQERFEVLKKRKTPGSFTEQDLEERILKQQQEEEQRKRERRERKKEKKKEKAAEEEPEVDPDVAAMMGFGGFRSSKK 202
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 29411348 29414201 - ClCG02G015080.1 Cla02g01490 267616
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01490 202 SMART ZnF_U1_5 81 115 IPR003604 GO:0003676|GO:0008270
Cla02g01490 202 Gene3D Classic Zinc Finger 78 116 - -
Cla02g01490 202 MobiDBLite consensus disorder prediction 137 183 - -
Cla02g01490 202 Pfam Zinc-finger of C2H2 type 84 108 - -
Cla02g01490 202 Coils Coil 116 136 - -
Cla02g01490 202 MobiDBLite consensus disorder prediction 27 52 - -
Cla02g01490 202 MobiDBLite consensus disorder prediction 137 202 - -
Cla02g01490 202 SUPERFAMILY beta-beta-alpha zinc fingers 79 125 IPR036236 -
Cla02g01490 202 Coils Coil 22 42 - -
Cla02g01490 202 Coils Coil 144 181 - -
Cla02g01490 202 PANTHER ZINC FINGER MATRIN-TYPE PROTEIN 2 7 202 IPR040107 GO:0000398|GO:0005681
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60675 PF12171 zf-C2H2_jaz 1.80E-06 CL0361 Cla TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01490 K12848 - csv:101206387 326.25