Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01502 ATGTCGACGGAGAGATTGATTTCCAGTGGTACAACTCCGTCGGAAGCTGAGCCGCCGAAGTTGGCTTCAGCGTCGCACTCGTTCCGGCAATGTGGAGAACCGGCTAGGGTTTTTGAGGAGCTGCCAATTGCTTCCATTGTATCGGTTTCACGGCCCGATACTGGAGATATCAGTCCCTTGCTGTTATCTTATACCATTGAAATTCAATACAAGCAGTTTAAATGGAGCTTAGTGAAGAAAGCATCACAAGTTCTATATTTACATTTTGCATTGAAGAGACGTGCATTTATCAAAGAACTTCACGAGAAACAAGAGCAGGTGAAAGAATGGCTTCACAACTTGGGAATAGTAGACCATGCAACTGTAGTTCATCACGATGACGAATCTGATGATGGGGCTTTTTCTTTGCATGATGAACAAACTACAAGAAACAGGAATGTTCCTTCTGTTGCTGCTTTACCCATCATTAAGCCAGCACTGGGAGGACAGGGGTCCATTGCAGACAAGGCAAAGCTAGCAATGCAAGGTTACTTAAATCACTTTTTTGGGAACTTGGATATTGTAAATTCTCGTGAGGTTTGGGCTGTTTTGAAACCAGGTTTCTTTGCCTTGGTTGCTGATCCTATGGACACTAAACTTCTAGATATAATTGTTTTTGATGTGCTACCAACATTAGAAGAAAAGGAGGGATCCCAAGCATGCTTAGCATATCAAGTCAAGGAGCGCAATCCTTTACGTTATTCGTTTAAGGTTAGATGCGGAGATGGGGACGTGAGGTTCAGAACTACAAGTACCGCCAAAGTCAAAGAATGGGTCTCATCAATTAATGATGCTGGTTTTGGAACCAAAGATGGCTGGTGCCACCCTCATCGCTTTGGTTCTTTTGCTCCTCAGAGAGGTTTGAGTGATGATGAAAGCCAAGCTCAGTGGTTCATAGATGGCCGGGCAGCTTTTGAAGCAATCGCTTGCTCTATTGAGGCTGCAAAATCTGAGATATTCATCACTGGTTGGTGGCTTTGCCCTGAGCTTTACATGCGACGTCCTTTTCTCAATCATTCTTCATCACGGCTTGATGCATTGCTGGAAAAAAAGGCAAAAGAAGGTGTCAAGATTTACATCTTAATGTACAAGGAGGTTCCTATTGCTCTGAAAATTAACAGTATGTATGGTAAGAAGAGGCTTGTAAATATTCATGAGAACATTAAGGTACTACGTTCTCCTGATCATATGTCAACTGGAATTTACTATTGGTCACATCACGAAAAAATTGTCATCGTTGATCACCACATTTGCTTCATTGGAGGTTTGGATTTATGCTTTGGCCGCTATGATACAATGGAACATAAAGTGAATGATTTCCCTCCTCATATGTGGCCGGGAAAGGACTATTACAACCCAAGGTTTTCCCACTTTGCTTGTGTTAGAGAATCTGAACCAAATTCTTGGGAAGACACAATGAAAGATGAATTGGAGCGGGAGAAGTGTCCTCGAATGCCATGGCATGATGTTCACTGTGCTCTTTGGGGATCTCCATGCCGTGATATTGCTCGACACTTTGTTCAGAGGTGGAACCATGCCAAGAGAAACAAAGCCCCAAATGAAGAAAAAATACCTCTACTTATGCCTCAACATGACATGGTCCTTCCACATTACATGGGAAGAAGCACGGAGTTGAGCTTAAAAAATAATGACTCGGAGCAAGATCACCAGAGGCAGACCACAGATGATTTCTTTTCCTCTTTATCACCACAGGAAGATATTCCATTACTGATGCCTCCAGAAATTGGTGGACTTCCAGATTCTAACGTGCAAACAAATAGTCTTTGCATGAATCACAATTTTTTCAATCAGCCAATGGAGATACGGAGTAGTGTTATGGATTCTTTCCAAGCATACAACGTTGAACCATTGACCCAATTTGAACAGACAAATGGATTGTTAGATGAATTTGGATTTTTGGATGAGTTTGGTTCTTTTGGTCATCTGAGGGAAGCTACTATTGATACTCCACCATATATGAAAACTTCAAATGATTGGTTGGAAACTGAACACGAAAGTAACCATGTTGTTGCTATAAACGAGGCCAAAGAAATTGGTCCACTTACTACTATCAATTGTCAGGTAATAAGAAGTGCCAGCCAGTGGTCAGCAGGAACAAGCAAACCAGAAGCAAGTATTCATGCTGCTTATTGTTCTGCCATTCAAGAGGCAAAACACTTCATCTACATTGAGAACCAGTTTTTCATATCAGGTTTATCAGGGGATGAGACCATACAAAATCGGGTTCTGGATGCACTATACCAACGTATATGGCTGGCTCATAAAGAAAAACAATGTTTTAGAGTTATTGTTGTTTTACCACTCTTACCTGGATTTCAGGGTGGTGTAGATGATAATGGTGCAGCAACTGTTCGAGCCTTGATGCATTGGCAGTACCGAACAATTAGTTGGGAAAAAACATCGATACTGTACCGTCTCAATCTTTTATTGGGTCCTAGAACACAAGATTATATTTTGTTTTGTGGCCTTCGATCATATGGCAGACTATTTGATGGTGGTCCAATTGCCACAAGTCAGGTATATGTGCATAGCAAATTGATGATAATTGATGATTGCATTACCTTTATTGGTTCCTCCAATATTAATGATAGAAGTTTACTTGGATCCAGAGATTCTGAGATTGGGGTAATTATTGAGGATAAAGAGTTTGTTGATTCATCTATGAATGGAAAACCTTGGAAAGCTGGAAAATTCGCCCATAGTCTACGATGCTCTTTGTGGTGTGAGCACCTCGGTCTTCATCTTGGAGAGGTCAGTCAAATCCTTGATCCTGTAGTAGAAGCAACATACAAAGATTTATGGTTAGCTACGGCAAAGGGCAAACTTGGTCATAACACACTAGATTTAGGAATAGCTGCTGAGAAGATAGAAAGCTGTGAAAATAGGGAAGTAAAGATGATAGATCCAATGGAGAGACTGAGGTGTATTAGGGGACATCTTGTCTGTTTTCCATTGAAGTTCTTGTGGCAAGAAGATCTCAGACCAGGGTTCATTGAGAGGGCGTTGGTTTCACTGAAAGACCTGATGAAGCCATCTTCTGAGTTCTTCAAGGATGGGGCTTCACTTCGAGTTACTGGAAAATTGGTGGAGTATTCTGTAGAGACAGCCATTGCCATAATTGTTGATGGAAATGTTAACTTGAAGATCGACACACAGCATCTGAGAGAACTTAGCATTCGCGTTGGCTCCATATATCAATTTATTGGTGAACTACTTGTTCAGTCAGATAACGAGGCACGTGTTGGCAGGAATGTTGATGGCATTGACCTCAACCTTTATCATCAGTCCCTGCAGCTGTTAAGACAATTTCAGGCTGATCACTTGAACAAGAGGACAAATTAG 3402 41.45 MSTERLISSGTTPSEAEPPKLASASHSFRQCGEPARVFEELPIASIVSVSRPDTGDISPLLLSYTIEIQYKQFKWSLVKKASQVLYLHFALKRRAFIKELHEKQEQVKEWLHNLGIVDHATVVHHDDESDDGAFSLHDEQTTRNRNVPSVAALPIIKPALGGQGSIADKAKLAMQGYLNHFFGNLDIVNSREVWAVLKPGFFALVADPMDTKLLDIIVFDVLPTLEEKEGSQACLAYQVKERNPLRYSFKVRCGDGDVRFRTTSTAKVKEWVSSINDAGFGTKDGWCHPHRFGSFAPQRGLSDDESQAQWFIDGRAAFEAIACSIEAAKSEIFITGWWLCPELYMRRPFLNHSSSRLDALLEKKAKEGVKIYILMYKEVPIALKINSMYGKKRLVNIHENIKVLRSPDHMSTGIYYWSHHEKIVIVDHHICFIGGLDLCFGRYDTMEHKVNDFPPHMWPGKDYYNPRFSHFACVRESEPNSWEDTMKDELEREKCPRMPWHDVHCALWGSPCRDIARHFVQRWNHAKRNKAPNEEKIPLLMPQHDMVLPHYMGRSTELSLKNNDSEQDHQRQTTDDFFSSLSPQEDIPLLMPPEIGGLPDSNVQTNSLCMNHNFFNQPMEIRSSVMDSFQAYNVEPLTQFEQTNGLLDEFGFLDEFGSFGHLREATIDTPPYMKTSNDWLETEHESNHVVAINEAKEIGPLTTINCQVIRSASQWSAGTSKPEASIHAAYCSAIQEAKHFIYIENQFFISGLSGDETIQNRVLDALYQRIWLAHKEKQCFRVIVVLPLLPGFQGGVDDNGAATVRALMHWQYRTISWEKTSILYRLNLLLGPRTQDYILFCGLRSYGRLFDGGPIATSQVYVHSKLMIIDDCITFIGSSNINDRSLLGSRDSEIGVIIEDKEFVDSSMNGKPWKAGKFAHSLRCSLWCEHLGLHLGEVSQILDPVVEATYKDLWLATAKGKLGHNTLDLGIAAEKIESCENREVKMIDPMERLRCIRGHLVCFPLKFLWQEDLRPGFIERALVSLKDLMKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVNLKIDTQHLRELSIRVGSIYQFIGELLVQSDNEARVGRNVDGIDLNLYHQSLQLLRQFQADHLNKRTN 1133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29569741 29584709 - ClCG02G015210.2 Cla02g01502 267628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01502 1133 CDD PLDc_vPLD1_2_yPLD_like_2 718 902 - -
Cla02g01502 1133 SUPERFAMILY PH domain-like 170 278 - -
Cla02g01502 1133 MobiDBLite consensus disorder prediction 1 25 - -
Cla02g01502 1133 Pfam Phospholipase D Active site motif 417 442 IPR001736 GO:0003824
Cla02g01502 1133 PIRSF PLD_euk 49 193 IPR016555 GO:0004630|GO:0006654|GO:0048017
Cla02g01502 1133 PIRSF PLD_euk 666 966 IPR016555 GO:0004630|GO:0006654|GO:0048017
Cla02g01502 1133 PIRSF PLD_euk 187 577 IPR016555 GO:0004630|GO:0006654|GO:0048017
Cla02g01502 1133 PIRSF PLD_euk 961 1026 IPR016555 GO:0004630|GO:0006654|GO:0048017
Cla02g01502 1133 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 858 885 IPR001736 GO:0003824
Cla02g01502 1133 SMART pld_4 415 442 IPR001736 GO:0003824
Cla02g01502 1133 SMART pld_4 858 885 IPR001736 GO:0003824
Cla02g01502 1133 Pfam Telomere-capping, CST complex subunit 1022 1126 IPR029146 GO:0003697|GO:1990879
Cla02g01502 1133 Pfam PLD-like domain 731 905 IPR025202 -
Cla02g01502 1133 PANTHER PHOSPHOLIPASE D 958 1020 IPR015679 -
Cla02g01502 1133 SUPERFAMILY Phospholipase D/nuclease 698 906 - -
Cla02g01502 1133 MobiDBLite consensus disorder prediction 1 18 - -
Cla02g01502 1133 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 415 442 IPR001736 GO:0003824
Cla02g01502 1133 Gene3D Endonuclease Chain A 672 919 - -
Cla02g01502 1133 Gene3D - 1024 1129 IPR012340 -
Cla02g01502 1133 ProSiteProfiles PH domain profile. 171 280 IPR001849 -
Cla02g01502 1133 Gene3D - 166 280 IPR011993 -
Cla02g01502 1133 PANTHER PHOSPHOLIPASE D 26 194 IPR015679 -
Cla02g01502 1133 PANTHER PHOSPHOLIPASE D 195 959 IPR015679 -
Cla02g01502 1133 CDD PLDc_vPLD1_2_yPLD_like_1 308 452 - -
Cla02g01502 1133 PANTHER PHOSPHOLIPASE D ZETA 2 958 1020 - -
Cla02g01502 1133 PANTHER PHOSPHOLIPASE D ZETA 2 195 959 - -
Cla02g01502 1133 Gene3D Endonuclease Chain A 300 551 - -
Cla02g01502 1133 PANTHER PHOSPHOLIPASE D ZETA 2 26 194 - -
Cla02g01502 1133 SUPERFAMILY Phospholipase D/nuclease 284 543 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01502 Cla-Chr2:29569741 Cla07g01298 Cla-Chr7:30122992 1.12E-15 dispersed
Cla02g01502 Cla-Chr2:29569741 Cla06g00458 Cla-Chr6:5582149 4.04E-66 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01502 K01115 - csv:101220522 1552.34