Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01554 | ATGCAAGATATCTTCGCTTCTGTTCGCCGATCATTGGTCTTTCGCCCTCCTCTCGACAATGATGATTCTCATTCCCCTGCAATTGGAGTTGGAGCCCTAGTTGATAAGATTAACTCCAGCATTCGCAAATCCAGAGTGTTTTCTAGGCATTCCCCTTCCTCCTCCGCTCTTCCTCCCATCCCTAAGGACACTGACCCTCCGATTCGATGGCGCAAAGGCGAATTGATTGGCTGTGGCGCCTTTGGTCGCGTTTATATGGGCATGAATCTTGGCTCTGGAGAGCTTCTTGCTGTCAAACAGGTTCTGATTGCTGCAAATGGCGCTTCGAAGGAGAAAGCGCAGGCTCATGTTCAGGAGCTTGAGGAAGAAGTAAAACTTCTGAAGGATCTTTCTCATCCAAATATTGTTAGATACTTGGGCACAGTCAGAGAGGATGATTCTTTAAATATATTATTGGAATTTGTTCCTGGTGGATCGATATCGTCACTTCTGGGGAAATTTGGAGCCTTTCCTGAAGCAGTTTTAAGAACATATACAAAACAGTTATTATTGGGATTGGAATATTTACACAAGAACGGTATCATGCACAGGGACATTAAGGGGGCAAATATCCTTGTAGACAACAAGGGATGCATTAAGCTTGCTGATTTTGGGGCATCAAAACAGGTTGTCGAGCTGGCTACAATTTCAGGAGCAAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTAATTCTGCAGACTGGGCATAGTTTCTCTGCTGACATATGGAGTGTTGGATGCACTTTTATTGAGATGGCTACAGGAAAGCCTCCTTGGAGCCAGCAGTATCAAGAGGTTGCTGCTCTTTTTCATATAGGCACAACGAAGTCTCATCCACCAATCCCTGAGCAGCTTTCGGTCGAAGCAAAAGATTTTCTGTTGAAATGTTTGCAGAAGTATGTTTCATTTCTTTGCATTTCTAACCCTGATTTTCAGGAAGCTAATCATAGCTTTACAATGTTTGAACTTCGAGATTCGTTTGAAGTGTTTTCTTTTGCTTCTCTTTGTCACTATTTCTCATGGAAAGTCAAATCTATGTGGTCAAATTGCAGGGAACCAAACTTAAGACCAACTGCCTCTGAACTTCTGAAGCATCCTTTTGTTACCGGGGAGGAGGCAGAATCTCAACTTGTGTCACGTGATGCATGCACGGAGCCCCTGGAAATCCATTCTCCTTTATATACTTCAGAACTTGAAATGAGTAAAACTCCAACACATCCTGGATCAAGTGATATTTGTAATTTGGATAGTCTGAGCTGCTCAAAGGTATACACTGCAAACAAACTAGAAAGTGATATATGGGGAGGAAATAGTGATGATGAAATGTGTCAGATTGATGACAAGGACGATTTTATGTTAGATGAAGTAAAAATCGACTCTTCTATTATACATGAGAACATGAAGAGTTATAACCCAATTTGCGAGCCCTCTGATGATGAGGATTGCAACTTTGATAGAAGTCCAATAGTAGACCAAGGAAGCAATTTACATGAGGAAGCTCTTGCACCTGGAAGCTGTTCTGGAGTTCTCGATGAGGACCAAAACTTCTCCTTTCCTAGTGGGCGATCACTTTCTGAAGATGAAGATGAGCTTACTGAATCAAAAATTAAAGTTTTCTTGGATGAGAAGGCTCTTGAATTGAAGAAACTGCAGTCACCGCTCTATGAGGAGTTCTACAATAGTTTGAATGCATCCTGCTCTCCAGTTTTTATCGAGAGTAAGCAAGATGAAAGTACTCCTAAATACTTGAAATTGCCCCCGAAAAGCCGGTCACCAAGTCGAAGTCCTGGTAATCCATCCCCAGCACTTGATGCTTTTGGCTCTGGTAGTCCAGGGAGTGGTAGCAGGGGTACTGTAAATGATCAAAGGTCACAACTCAACGATTGGAAAGGACTTCTAGTTGATGGTCAGTCAGAAGCTGGTAGCCCAAGTAAGCATTATTCTGAAATACAGAGAAAGTGGAAGGAAGAGCTTGATCAAGAGCTTGAGAGAAAACGAGAGATGATGCGTCAAGCTGGTGTGGGAGGCAAAACTTCATCTCCAAAGGATAAAGCCATGGGCAGGCCAAGAGAGCGGACAAGATTTGCATCTCCATTCCGGGATGATGCGTCGAGCGCTGGGAGGGAGAACAGGGAAAACTTCATCTCCTGA | 2199 | 43.29 | MQDIFASVRRSLVFRPPLDNDDSHSPAIGVGALVDKINSSIRKSRVFSRHSPSSSALPPIPKDTDPPIRWRKGELIGCGAFGRVYMGMNLGSGELLAVKQVLIAANGASKEKAQAHVQELEEEVKLLKDLSHPNIVRYLGTVREDDSLNILLEFVPGGSISSLLGKFGAFPEAVLRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTFIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEQLSVEAKDFLLKCLQKYVSFLCISNPDFQEANHSFTMFELRDSFEVFSFASLCHYFSWKVKSMWSNCREPNLRPTASELLKHPFVTGEEAESQLVSRDACTEPLEIHSPLYTSELEMSKTPTHPGSSDICNLDSLSCSKVYTANKLESDIWGGNSDDEMCQIDDKDDFMLDEVKIDSSIIHENMKSYNPICEPSDDEDCNFDRSPIVDQGSNLHEEALAPGSCSGVLDEDQNFSFPSGRSLSEDEDELTESKIKVFLDEKALELKKLQSPLYEEFYNSLNASCSPVFIESKQDESTPKYLKLPPKSRSPSRSPGNPSPALDAFGSGSPGSGSRGTVNDQRSQLNDWKGLLVDGQSEAGSPSKHYSEIQRKWKEELDQELERKREMMRQAGVGGKTSSPKDKAMGRPRERTRFASPFRDDASSAGRENRENFIS | 732 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 30214044 | 30219606 | - | ClCG02G015820.1 | Cla02g01554 | 267680 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01554 | 732 | MobiDBLite | consensus disorder prediction | 662 | 687 | - | - | |
Cla02g01554 | 732 | MobiDBLite | consensus disorder prediction | 45 | 64 | - | - | |
Cla02g01554 | 732 | Pfam | Protein kinase domain | 71 | 315 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01554 | 732 | Gene3D | Phosphorylase Kinase; domain 1 | 65 | 155 | - | - | |
Cla02g01554 | 732 | Gene3D | Transferase(Phosphotransferase) domain 1 | 157 | 404 | - | - | |
Cla02g01554 | 732 | MobiDBLite | consensus disorder prediction | 699 | 732 | - | - | |
Cla02g01554 | 732 | ProSitePatterns | Protein kinases ATP-binding region signature. | 76 | 99 | IPR017441 | GO:0005524 | |
Cla02g01554 | 732 | Coils | Coil | 103 | 130 | - | - | |
Cla02g01554 | 732 | MobiDBLite | consensus disorder prediction | 592 | 732 | - | - | |
Cla02g01554 | 732 | MobiDBLite | consensus disorder prediction | 627 | 643 | - | - | |
Cla02g01554 | 732 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 367 | 669 | - | - | |
Cla02g01554 | 732 | SMART | serkin_6 | 70 | 335 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01554 | 732 | ProSiteProfiles | Protein kinase domain profile. | 70 | 384 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01554 | 732 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 | 1 | 316 | - | - | |
Cla02g01554 | 732 | SUPERFAMILY | Protein kinase-like (PK-like) | 69 | 315 | IPR011009 | - | |
Cla02g01554 | 732 | CDD | STKc_MAPKKK | 69 | 384 | - | - | |
Cla02g01554 | 732 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 1 | 316 | - | - | |
Cla02g01554 | 732 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 194 | 206 | IPR008271 | GO:0004672|GO:0006468 | |
Cla02g01554 | 732 | Coils | Coil | 667 | 687 | - | - | |
Cla02g01554 | 732 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 | 367 | 669 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01554 | Cla-Chr2:30214044 | Cla06g00558 | Cla-Chr6:6766067 | 0 | dispersed | |
Cla02g01554 | Cla-Chr2:30214044 | Cla01g00446 | Cla-Chr1:4840377 | 1.33E-71 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80353 | PF00069 | Pkinase | 5.40E-65 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01554 | K20606 | - | csv:101209358 | 1159.44 |