Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01554 ATGCAAGATATCTTCGCTTCTGTTCGCCGATCATTGGTCTTTCGCCCTCCTCTCGACAATGATGATTCTCATTCCCCTGCAATTGGAGTTGGAGCCCTAGTTGATAAGATTAACTCCAGCATTCGCAAATCCAGAGTGTTTTCTAGGCATTCCCCTTCCTCCTCCGCTCTTCCTCCCATCCCTAAGGACACTGACCCTCCGATTCGATGGCGCAAAGGCGAATTGATTGGCTGTGGCGCCTTTGGTCGCGTTTATATGGGCATGAATCTTGGCTCTGGAGAGCTTCTTGCTGTCAAACAGGTTCTGATTGCTGCAAATGGCGCTTCGAAGGAGAAAGCGCAGGCTCATGTTCAGGAGCTTGAGGAAGAAGTAAAACTTCTGAAGGATCTTTCTCATCCAAATATTGTTAGATACTTGGGCACAGTCAGAGAGGATGATTCTTTAAATATATTATTGGAATTTGTTCCTGGTGGATCGATATCGTCACTTCTGGGGAAATTTGGAGCCTTTCCTGAAGCAGTTTTAAGAACATATACAAAACAGTTATTATTGGGATTGGAATATTTACACAAGAACGGTATCATGCACAGGGACATTAAGGGGGCAAATATCCTTGTAGACAACAAGGGATGCATTAAGCTTGCTGATTTTGGGGCATCAAAACAGGTTGTCGAGCTGGCTACAATTTCAGGAGCAAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTAATTCTGCAGACTGGGCATAGTTTCTCTGCTGACATATGGAGTGTTGGATGCACTTTTATTGAGATGGCTACAGGAAAGCCTCCTTGGAGCCAGCAGTATCAAGAGGTTGCTGCTCTTTTTCATATAGGCACAACGAAGTCTCATCCACCAATCCCTGAGCAGCTTTCGGTCGAAGCAAAAGATTTTCTGTTGAAATGTTTGCAGAAGTATGTTTCATTTCTTTGCATTTCTAACCCTGATTTTCAGGAAGCTAATCATAGCTTTACAATGTTTGAACTTCGAGATTCGTTTGAAGTGTTTTCTTTTGCTTCTCTTTGTCACTATTTCTCATGGAAAGTCAAATCTATGTGGTCAAATTGCAGGGAACCAAACTTAAGACCAACTGCCTCTGAACTTCTGAAGCATCCTTTTGTTACCGGGGAGGAGGCAGAATCTCAACTTGTGTCACGTGATGCATGCACGGAGCCCCTGGAAATCCATTCTCCTTTATATACTTCAGAACTTGAAATGAGTAAAACTCCAACACATCCTGGATCAAGTGATATTTGTAATTTGGATAGTCTGAGCTGCTCAAAGGTATACACTGCAAACAAACTAGAAAGTGATATATGGGGAGGAAATAGTGATGATGAAATGTGTCAGATTGATGACAAGGACGATTTTATGTTAGATGAAGTAAAAATCGACTCTTCTATTATACATGAGAACATGAAGAGTTATAACCCAATTTGCGAGCCCTCTGATGATGAGGATTGCAACTTTGATAGAAGTCCAATAGTAGACCAAGGAAGCAATTTACATGAGGAAGCTCTTGCACCTGGAAGCTGTTCTGGAGTTCTCGATGAGGACCAAAACTTCTCCTTTCCTAGTGGGCGATCACTTTCTGAAGATGAAGATGAGCTTACTGAATCAAAAATTAAAGTTTTCTTGGATGAGAAGGCTCTTGAATTGAAGAAACTGCAGTCACCGCTCTATGAGGAGTTCTACAATAGTTTGAATGCATCCTGCTCTCCAGTTTTTATCGAGAGTAAGCAAGATGAAAGTACTCCTAAATACTTGAAATTGCCCCCGAAAAGCCGGTCACCAAGTCGAAGTCCTGGTAATCCATCCCCAGCACTTGATGCTTTTGGCTCTGGTAGTCCAGGGAGTGGTAGCAGGGGTACTGTAAATGATCAAAGGTCACAACTCAACGATTGGAAAGGACTTCTAGTTGATGGTCAGTCAGAAGCTGGTAGCCCAAGTAAGCATTATTCTGAAATACAGAGAAAGTGGAAGGAAGAGCTTGATCAAGAGCTTGAGAGAAAACGAGAGATGATGCGTCAAGCTGGTGTGGGAGGCAAAACTTCATCTCCAAAGGATAAAGCCATGGGCAGGCCAAGAGAGCGGACAAGATTTGCATCTCCATTCCGGGATGATGCGTCGAGCGCTGGGAGGGAGAACAGGGAAAACTTCATCTCCTGA 2199 43.29 MQDIFASVRRSLVFRPPLDNDDSHSPAIGVGALVDKINSSIRKSRVFSRHSPSSSALPPIPKDTDPPIRWRKGELIGCGAFGRVYMGMNLGSGELLAVKQVLIAANGASKEKAQAHVQELEEEVKLLKDLSHPNIVRYLGTVREDDSLNILLEFVPGGSISSLLGKFGAFPEAVLRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTFIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEQLSVEAKDFLLKCLQKYVSFLCISNPDFQEANHSFTMFELRDSFEVFSFASLCHYFSWKVKSMWSNCREPNLRPTASELLKHPFVTGEEAESQLVSRDACTEPLEIHSPLYTSELEMSKTPTHPGSSDICNLDSLSCSKVYTANKLESDIWGGNSDDEMCQIDDKDDFMLDEVKIDSSIIHENMKSYNPICEPSDDEDCNFDRSPIVDQGSNLHEEALAPGSCSGVLDEDQNFSFPSGRSLSEDEDELTESKIKVFLDEKALELKKLQSPLYEEFYNSLNASCSPVFIESKQDESTPKYLKLPPKSRSPSRSPGNPSPALDAFGSGSPGSGSRGTVNDQRSQLNDWKGLLVDGQSEAGSPSKHYSEIQRKWKEELDQELERKREMMRQAGVGGKTSSPKDKAMGRPRERTRFASPFRDDASSAGRENRENFIS 732
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 30214044 30219606 - ClCG02G015820.1 Cla02g01554 267680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01554 732 MobiDBLite consensus disorder prediction 662 687 - -
Cla02g01554 732 MobiDBLite consensus disorder prediction 45 64 - -
Cla02g01554 732 Pfam Protein kinase domain 71 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01554 732 Gene3D Phosphorylase Kinase; domain 1 65 155 - -
Cla02g01554 732 Gene3D Transferase(Phosphotransferase) domain 1 157 404 - -
Cla02g01554 732 MobiDBLite consensus disorder prediction 699 732 - -
Cla02g01554 732 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Cla02g01554 732 Coils Coil 103 130 - -
Cla02g01554 732 MobiDBLite consensus disorder prediction 592 732 - -
Cla02g01554 732 MobiDBLite consensus disorder prediction 627 643 - -
Cla02g01554 732 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 367 669 - -
Cla02g01554 732 SMART serkin_6 70 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01554 732 ProSiteProfiles Protein kinase domain profile. 70 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01554 732 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 1 316 - -
Cla02g01554 732 SUPERFAMILY Protein kinase-like (PK-like) 69 315 IPR011009 -
Cla02g01554 732 CDD STKc_MAPKKK 69 384 - -
Cla02g01554 732 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 316 - -
Cla02g01554 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Cla02g01554 732 Coils Coil 667 687 - -
Cla02g01554 732 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 367 669 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01554 Cla-Chr2:30214044 Cla06g00558 Cla-Chr6:6766067 0 dispersed
Cla02g01554 Cla-Chr2:30214044 Cla01g00446 Cla-Chr1:4840377 1.33E-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80353 PF00069 Pkinase 5.40E-65 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01554 K20606 - csv:101209358 1159.44