Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01593 | ATGTTGAGATTCCATGTGGGCGGGAAGGTGGTCGAGAGAGTTGACTTGTTGAGGAAGAAGCACTGGGCAGGGCGGTTCGATCTGTGGCCATTTGCCATTCTTTATGCGGCCTGGCTTGCCGTTGTTGTTCCTAGTATAGACTTTGGGGATGCTTTCATTGTTTTAGGTGGACTTGCGGCTCTTCATGTTCTGGTCTTGCTTTTCACTGCTTGGTCGGTTGATTTCAAATGTTTTGTCCAGTACAGTCAGGTTAATGATATTTACCGTGCTGATACATGCAAGATAGTTCCAGCAAAATTTTCGGGCTCAAAAGAAATTGTTTCACTTCATTTTCGTAAGCTTCTGGCAGGTTCTGCATCTGCACTTGACCTTGAGGAGATCTACTTTGATTTCAGAAAACAACGATTTATTTATTCAAAGGAGAAGGAGACATTCTGCAAGCTTCCTTACCCAACAAAAGAAACTTTTGGTTATTATCTAAAGAATACTGGCTATGGGTCCGAGCCTAAAGTTGTAGCTGCTGTTGAAAAATGGGGGCGCAATATATTCGAGTATCCACAACCTACGTTTCAGAAATTAATGAAGGAGCAGTGTATGGAACCATTTTTTGTGTTTCAGGTTTTTTGTGTGGGACTATGGTGTTTGGATGAGTATTGGTATTACAGCCTGTTTACTCTGTTTATGCTGTTCATGTTTGAGTCAACAATGGCAAAAAGTCGGTTAAAGACCTTAAGTGAGTTAAGACGTGTCAGAGTGGATACTCAGACCTTAATGGTGCACCGTTGTGGAAAGTGGGTGAAGCTACCTGGAACTGAGCTTTTGCCAGGAGATGTTGTCTCCATAGGGCGTGATTCTGGTCAGAGTGGTGAAGATAAATCCGTACCTGCTGATATGCTTATTTTGGCTGGAAGTACTATTGTTAATGAAGCCATTCTTACTGGGGAGTCTACACCACAATGGAAGGTTTCAATAACTGGGAGAGGAATTGAGGAGAAGTTATCAGCTAAGAGAGACAAAAGTCATGTGTTATTTGGTGGGACCAAAATACTCCAGCATACTCCGGATAAGACCTTTCCTCTTAGAACCCCTGATGGTGGCTGCCTAGCAGTTGTTTTGCGAACTGGATTTGAAACAAGTCAAGGGAAACTAATGCGCACAATTTTATTTTCTACAGAGAGGGTTACAGCTAACAGTTGGGAAAGTGGCCTATTTATTCTGTTCTTAGTTGTATTTGCAGTTATAGCTGCTGGTTACGTACTTGTAAAGGGGTTGGAAGATCCCACGAGAAGCAAGTACAAGCTTTTCCTTAGTTGCTCACTTATAATCACCTCTGTTATTCCTCCTGAACTACCAATGGAACTGTCAATAGCAGTTAATACATCGTTAATTGCTCTAGCACGCCGTGGAATATTTTGTACAGAGCCTTTCCGGATACCATTTGCTGGAAAGGTTGATATTTGTTGTTTCGATAAAACTGGAACATTGACATCAGATGACATGGAGTTTCGAGGAGTAGTTGGGTTGAGTGATAAGGAGGATTTGGAAACTGACATGACTAGTGTGTCTTTGCGTACAGTCGAAATTCTGGCTTCTTGTCATGCATTGGTGTTTGTGGACAACAAGTTGGTGGGGGATCCTCTTGAAAAGGCTGCTCTCAAGGGAGTTGATTGGATTTACAAATCTGATGAGAAAGCGATTCCCAGAAAGGGAAGTGGCCACGCTGTCCAGATTGTTCAGAGGCACCACTTTGCTTCACATTTGAAGAGAATGGCAGTTGTTGTGCGCCTTCAAGAGGAATTTTTTGCATTTGTGAAGGGTGCCCCCGAAACCATCCAGGAGAGGCTCACTGATATACCTTCATTTTATGTTGAGACATATAAGAAATATACACGACAAGGTTCCCGAGTCCTTGCTCTTGCTTATAAGTCACTTCCAGACATGACAGTTAGTGAAGCTAGAGGCCTGGATAGGGACACGGTAGAGAGTGACCTGACATTTGCTGGTTTTGCGGTGTTCAATTGTCCAATTAGAGCAGATTCGGCTACAGTATTATCTGAGCTTAAAGGGTCATCCCATGACTTGGTAATGATTACTGGTGACCAAGCTTTAACAGCGTGCCATGTTGCTAGCCAAGTTCATATTACATCAAAGCAGATTTTAATTCTCAATTCAATGAAGGGAACTGAGGAATATGAATGGCTTTCCCCAGATGAGTCACAGACAGTTCCCTACAGAGAGAAAGAGGTGGGAACTTTATCGGAGACATATGATCTTTGTATTGGAGGTGACTGCATCGCAATGCTACAACGCACCTCTACTGTGCTGGATGTTATTCCATACGTTAAGGTTTTTGCAAGAGTTGCTCCTGAGCAGAAAGAACTCATTTTGACAACTTTCAAAACAGTTGGAAGAATGACGTTAATGTGTGGGGATGGAACGAACGATGTTGGAGCTTTGAAGCAGGCCCATGTAGGAATTGCTCTCCTAAACGCAGTCCCTCCTCCTCAAAGTGGCAACTCTTCTTCAGAAGCATCAAAAGATGAGGCTGTACGGTCTGCAAAGTCAAAGAAATCTAAGCCTTCATCCGAATCATCAGGAAAAGCACTTGTAAGTGGAGAAGGTTCTTCAAAAAGCAAAGGTGGTGCAAAACTGGATTCTGCTGCTGAGCAAGCAAGTAACCGTCCACGGACACCTGCAGAGATGCAAAGACAGAAGCTAAAGAAACTTATGGATGAGTTAAATGAAGAGGGTGATGGGCGCTCTGCCCCTATTGTCAAGCTTGGAGATGCATCCATGGCATCACCATTCACCGCAAAGCATGCCTCTGTTGCTCCTACTACTGACATTATTCGCCAAGGCCGAAGTACTCTAGTGACAACTCTACAGATGTTCAAAATACTCGGTCTCAACTGCCTCGCTACTGCCTATGTACTGAGTGTTATGTATTTGGATGGTGTAAAGCTTGGCGATATTCAAGCCACTATCAGTGGAGTATTCACAGCAGCCTTTTTTCTCTTCATCTCACATGCGCGGCCCCTTCCAACACTCTCAGCTGAACGCCCCCATCCACACATCTTTTGCTCTTACGTGCTCCTTTCTCTGTTGGGCCAATTTGCAATCCACTTATGTTTCTTGATTTCTTCGGTTAAAGAAGCTGAAAAGCACATGCCTGATGAATGTATAGAGCCAGACTCAGATTTTCATCCCAACTTGGTTAACACGGTTTCATACATGGTAAGCATGATGCTTCAGGTGGCAACCTTTGCTGTAAACTACATGGGTCATCCCTTCAACCAGAGTGTATCCGAAAACAAGCCGTTCTTATACGCCCTCTTGGCTGCAGTTGGTTTTTTCACCGTTATTACCTCTGATTTGTTTAGAGATCTCAATGACTGGCTGAAACTTGTTCCATTGCCTGTGGGAATGAGGGATAAGCTTCTGGCTTGGGCACTTCTTATGTTCTTGTGCTGTTACTCTTGGGAAAGACTGTTGAGATTTATGTTCCCAGGTAAAATCCCAGCGTGGCGGAAGCGACAACGACTGGTGGCTGCTAATCTGGAGAAGAAGAAACAGGTCTGA | 3579 | 43.73 | MLRFHVGGKVVERVDLLRKKHWAGRFDLWPFAILYAAWLAVVVPSIDFGDAFIVLGGLAALHVLVLLFTAWSVDFKCFVQYSQVNDIYRADTCKIVPAKFSGSKEIVSLHFRKLLAGSASALDLEEIYFDFRKQRFIYSKEKETFCKLPYPTKETFGYYLKNTGYGSEPKVVAAVEKWGRNIFEYPQPTFQKLMKEQCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLSELRRVRVDTQTLMVHRCGKWVKLPGTELLPGDVVSIGRDSGQSGEDKSVPADMLILAGSTIVNEAILTGESTPQWKVSITGRGIEEKLSAKRDKSHVLFGGTKILQHTPDKTFPLRTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLVKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFRGVVGLSDKEDLETDMTSVSLRTVEILASCHALVFVDNKLVGDPLEKAALKGVDWIYKSDEKAIPRKGSGHAVQIVQRHHFASHLKRMAVVVRLQEEFFAFVKGAPETIQERLTDIPSFYVETYKKYTRQGSRVLALAYKSLPDMTVSEARGLDRDTVESDLTFAGFAVFNCPIRADSATVLSELKGSSHDLVMITGDQALTACHVASQVHITSKQILILNSMKGTEEYEWLSPDESQTVPYREKEVGTLSETYDLCIGGDCIAMLQRTSTVLDVIPYVKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGIALLNAVPPPQSGNSSSEASKDEAVRSAKSKKSKPSSESSGKALVSGEGSSKSKGGAKLDSAAEQASNRPRTPAEMQRQKLKKLMDELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDIQATISGVFTAAFFLFISHARPLPTLSAERPHPHIFCSYVLLSLLGQFAIHLCFLISSVKEAEKHMPDECIEPDSDFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSVSENKPFLYALLAAVGFFTVITSDLFRDLNDWLKLVPLPVGMRDKLLAWALLMFLCCYSWERLLRFMFPGKIPAWRKRQRLVAANLEKKKQV | 1192 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 30603481 | 30624269 | - | ClCG02G016210.2 | Cla02g01593 | 267719 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01593 | 1192 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 490 | 496 | IPR018303 | - | |
Cla02g01593 | 1192 | SUPERFAMILY | Calcium ATPase, transduction domain A | 256 | 387 | IPR008250 | - | |
Cla02g01593 | 1192 | Pfam | E1-E2 ATPase | 256 | 468 | - | - | |
Cla02g01593 | 1192 | Gene3D | - | 669 | 847 | IPR023214 | - | |
Cla02g01593 | 1192 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 403 | 517 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla02g01593 | 1192 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 774 | 828 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla02g01593 | 1192 | ProSitePatterns | Hypothetical cof family signature 2. | 809 | 831 | - | - | |
Cla02g01593 | 1192 | SUPERFAMILY | HAD-like | 483 | 834 | IPR036412 | - | |
Cla02g01593 | 1192 | MobiDBLite | consensus disorder prediction | 847 | 861 | - | - | |
Cla02g01593 | 1192 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 167 | 1169 | IPR023298 | - | |
Cla02g01593 | 1192 | TIGRFAM | P-ATPase-V: P-type ATPase of unknown pump specificity (type V) | 42 | 1149 | IPR006544 | GO:0006812|GO:0016021|GO:0019829|GO:0140358 | |
Cla02g01593 | 1192 | Pfam | haloacid dehalogenase-like hydrolase | 485 | 713 | - | - | |
Cla02g01593 | 1192 | PANTHER | CATION-TRANSPORTING ATPASE-RELATED | 1 | 1186 | - | - | |
Cla02g01593 | 1192 | Coils | Coil | 896 | 916 | - | - | |
Cla02g01593 | 1192 | Gene3D | - | 224 | 388 | - | - | |
Cla02g01593 | 1192 | SFLD | C1.7: P-type atpase like | 469 | 955 | - | - | |
Cla02g01593 | 1192 | PRINTS | P-type cation-transporting ATPase superfamily signature | 308 | 322 | - | - | |
Cla02g01593 | 1192 | PRINTS | P-type cation-transporting ATPase superfamily signature | 488 | 502 | - | - | |
Cla02g01593 | 1192 | PRINTS | P-type cation-transporting ATPase superfamily signature | 690 | 700 | - | - | |
Cla02g01593 | 1192 | PRINTS | P-type cation-transporting ATPase superfamily signature | 809 | 828 | - | - | |
Cla02g01593 | 1192 | PANTHER | CATION-TRANSPORTING ATPASE | 1 | 1186 | - | - | |
Cla02g01593 | 1192 | SFLD | p-type atpase | 469 | 955 | IPR044492 | - | |
Cla02g01593 | 1192 | MobiDBLite | consensus disorder prediction | 830 | 903 | - | - | |
Cla02g01593 | 1192 | Gene3D | - | 483 | 668 | IPR023299 | GO:0000166 | |
Cla02g01593 | 1192 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 494 | 678 | IPR023299 | GO:0000166 | |
Cla02g01593 | 1192 | CDD | P-type_ATPase_cation | 170 | 1107 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01593 | Cla-Chr2:30603481 | Cla05g02106 | Cla-Chr5:32672272 | 4.44E-20 | dispersed | |
Cla02g01593 | Cla-Chr2:30603481 | Cla09g01799 | Cla-Chr9:35503369 | 1.26E-17 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01593 | K14950 | - | csv:101215828 | 2291.54 |