Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01601 ATGGGATGTATAATTAGCCGAGAGGTAGCTTCCAGAAACTTAGCAGATTCCAAGAATAAGAAGGAGAAGATTTCTGAATGTGGTGATGATTTGGAAAGAAAAGAAGCTGGTGTGGCTGTTGTTGATGTTGCTCAGGAGGAAGAGCATGGCCATGGGGCTCAGCCCTTGACAAAAGAGCAGAGAAGAAAATTGAAACCTAACCCCAGGCTGAGTAATTTGCCAAAGCAATCTCAGGGCGAGCAGGTGGCTGCTGGATGGCCTTCTTGGCTCACAGCAGTTTGTGGGGAGGCACTCAGTGGTTGGATTCCGAGGAAGGCTGATACATTTGAGAAGATTGATAAGATTGGACAAGGAACATACAGTAATGTGTACAAAGCAAAAGATATACTGACTGGTAAGGTCGTTGCACTGAAGAAGGTACGTTTTGACAATTTAGAGCCAGAAAGTGTAAGATTTATGGCCAGAGAGATTCTCATTTTGCGACGCCTAGATCATCCTAATGTTGTAAAGCTAGAGGGTTTGGTTACATCAAGGATGTCATGTAGTTTGTACCTCGTATTTGAGTACATGGAGCATGATTTAGCTGGTCTTGCTGCAAATCCATCTATCAAATTTACAGAGGCTCAGGTTAAGTGTTTCATGCAACAACTTCTATCAGGACTTGAGCATTGTCACAGCCACAGGGTGCTTCATCGCGATATTAAGGGTTCAAATCTTCTTATTGATGGTGAAGGGTTGCTTAAGATTGCTGACTTTGGACTAGCTACTTTCTTTGATCCAAAACACAAGCACCCATTGACTAATCGTGTTGTAACCTTATGGTATCGATCCCCCGAGCTTCTACTTGGTGCAACTCACTATGGTGTAGGCATCGACCTTTGGAGTGCAGGTTGTATTTTAGCTGAGTTATTAGCTGGGAGGGCCATAATGCCCGGCCGTACAGAGGTTGAGCAACTACATAAGATATTCAAGCTGTGTGGCTCAGCTTCAGATGAATATTTAAAGAGGGCAAAGTTGCCAAATGCAGCCTTATTTAGACCCCGAGAACCTTATAAGAGATGTATAAAAGAGACTTTTAAGGATTTCCCACCATCATCATTTCCCCTTATAGAAACACTTCTTGCAATTGACCCAGCTGAGAGAATGACAGCTACAGATGCATTGAAGAGCGAGAACCTTATGCTTGTGAACCTTCTAGCCTCCCCAAATATCCACCTAGTAAGGAGATGGATGCTAAACGACGGGATGATGAAGCTCGGAGGTCTGAATTTTGAATACTTCTATCTTTCTCAGGGTATTAAGAGTGTGGGTCTGCTTATATGTGCATATGTATGCTCTTTTAAGCATCACTTCATATGGATGTACAGACAAAGAGCAGCAAGTAAATTGCAGAATGATCGTGTGAAGAAGACACACACACGTAACCGTGCTGGTAGGGCCATACCTGTTCAAGGAGCCAATGCAGAACTCCAATCAAATATTGATAGACGGCGTCTAATTACTCATGCAAATGCAAAGAGCAAGAGCGAAAAGTTCCCCCCTCCACATCAAGATGGGGCACTCGGGTTCACATTGGGATATTCACGTCATATTGATCCAGCTGTTATTCCTTCTGATGTTCCATTTAGCTCCACATCATTTGGCTATCCAAACGAACTGGACCAAGCCTGGTCGGGTCCACTAGTTCAGTCTTCTAAAATCGGTGCTCAAAGGCAGAAGCATTTGGGAGGTGATGCAAAAGAACAGCAATCTTCAGTTAAAGGAAAGAAGGCAGCATGA 1779 43.62 MGCIISREVASRNLADSKNKKEKISECGDDLERKEAGVAVVDVAQEEEHGHGAQPLTKEQRRKLKPNPRLSNLPKQSQGEQVAAGWPSWLTAVCGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDILTGKVVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAANPSIKFTEAQVKCFMQQLLSGLEHCHSHRVLHRDIKGSNLLIDGEGLLKIADFGLATFFDPKHKHPLTNRVVTLWYRSPELLLGATHYGVGIDLWSAGCILAELLAGRAIMPGRTEVEQLHKIFKLCGSASDEYLKRAKLPNAALFRPREPYKRCIKETFKDFPPSSFPLIETLLAIDPAERMTATDALKSENLMLVNLLASPNIHLVRRWMLNDGMMKLGGLNFEYFYLSQGIKSVGLLICAYVCSFKHHFIWMYRQRAASKLQNDRVKKTHTRNRAGRAIPVQGANAELQSNIDRRRLITHANAKSKSEKFPPPHQDGALGFTLGYSRHIDPAVIPSDVPFSSTSFGYPNELDQAWSGPLVQSSKIGAQRQKHLGGDAKEQQSSVKGKKAA 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 30730677 30737105 - ClCG02G016290.2 Cla02g01601 267727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01601 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Cla02g01601 592 PANTHER CELL DIVISION PROTEIN KINASE 456 572 - -
Cla02g01601 592 MobiDBLite consensus disorder prediction 43 66 - -
Cla02g01601 592 ProSiteProfiles Protein kinase domain profile. 109 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01601 592 SMART serkin_6 109 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01601 592 Pfam Protein kinase domain 109 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01601 592 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Cla02g01601 592 PANTHER OS01G0367700 PROTEIN 54 394 - -
Cla02g01601 592 PANTHER CELL DIVISION PROTEIN KINASE 54 394 - -
Cla02g01601 592 MobiDBLite consensus disorder prediction 573 592 - -
Cla02g01601 592 MobiDBLite consensus disorder prediction 560 592 - -
Cla02g01601 592 MobiDBLite consensus disorder prediction 43 80 - -
Cla02g01601 592 PANTHER OS01G0367700 PROTEIN 456 572 - -
Cla02g01601 592 SUPERFAMILY Protein kinase-like (PK-like) 104 391 IPR011009 -
Cla02g01601 592 Gene3D Transferase(Phosphotransferase) domain 1 192 402 - -
Cla02g01601 592 CDD STKc_CDK9_like 109 391 - -
Cla02g01601 592 Gene3D Phosphorylase Kinase; domain 1 96 191 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla02g01601 Cla03g01582 CCT
Cla02g01601 Cla03g01582 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01601 Cla-Chr2:30730677 Cla05g00613 Cla-Chr5:5686445 0 dispersed
Cla02g01601 Cla-Chr2:30730677 Cla03g01582 Cla-Chr3:31590266 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80355 PF00069 Pkinase 2.00E-66 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01601 K08819 - csv:101217497 998.423