Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01615 ATGGATGGACTCTCAGATCTTGAGCTTGATTGCTCTGAATTTGTTGAAGTTGATCCCACTGGGAGATATGGCAGATACAATGAAATTTTGGGAAAAGGAGCTTCAAAAACAGTTTACAGAGCATTTGATGAATATGAAGGAATTGAGGTCGCTTGGAATCAAGTGAAACTTTATGATTTCTTGCAAAGTCCTGAAGATCTGGAAAGACTTTACTGTGAGATTCATCTTTTGAAGACATTGAAGCATAGAAATATAATGAAATTCTATACTTCTTGGGTTGATATTGCCAATAGAAACATCAATTTTGTTACTGAAATGTTCACTTCTGGCACTCTCAGGCAGTATAGGCTGAAGCATAAGAGAGTTAATATTAGAGCGGTGAAGCATTGGTGCAGGCAGATTTTGAGGGGGCTTCATTATTTGCATAGCCATGAGCCTCCTGTAATCCATAGAGATCTCAAGTGTGACAATATCTTTGTTAATGGGAATCAAGGGGAAGTTAAGATTGGTGATCTTGGACTTGCAGCAATCCTCAGGAAATCTCATGCTGATCATTGTGTGGGTATGATTGTGAAGCCAAACCATTTATACCATCCCCTCTTGAAACTCTATTCATTTCAGGGGCTGTTTGGCTTACAGGTTTGCGAATCCCACGGACTACATAAATTCGTGCTTGGAAACCACCTCTCGGCCTATACGGTTGGTTTCTTTTACATCAGGACACCGGAGTTTATGGCTCCAGAAGTGTATGCAGAGGCATACAATGAATTAGTCGATATTTACTCATTTGGAATGTGCATTCTGGAGATGATAACTTTTGAATATCCATACAGCGAATGCACACATCCTGCTCAAATCTATAAGAAAGTCATATCTGGGAAAAAACCAGATGCCTTGTACAAAGTGAAGGATCCCGAAGTGCGGCAATTCATTGATAAGTGTTTGGCATCGGTTTCATTTAGGCTCTCGGCAGCGGAGCTTTTGAATGACCCTTTTCTTCAAATTGATAATGGTGAATACGATCTAAGACCTGTTGATTATGGAAGAGGATTGGATGACGTTTGCCCTCTTATAAGACAACCTTATCTAGAACTTCGTAGAAGTGACAGCTCCTTTTGTAATGGATATCCATATGATTATAGTTTTGAAGCTTCAAGTGAGTCAGGTTATCATCCAATTGATAATGAAACCAATGGGATTGAACTTTTTGAGTATTGTGAAGGTGAACATTCTGAGGATGTTGATATTAGCATTAAAGGGAAGATGAGAGAAGATGGTGGCATCTTCTTAAGACTTAGAATTGCAGATAAAGAAGGGCGTATCAGGAACATTTATTTCCCATTTGATGTCGAGACAGATACAGCATTAAGTGTAGCAACAGAAATGGTTGCAGAGCTTGATATTACAGATCAAGACGTGACCAGAATTGCTGATATGATTGACGGAGAAATTGCTTCCTTGGTGCCTGAATGGAGGCCAGGTCCGGGAATTGAGGAAACGCCCCGCTTTGCAAATCAAAGCTATTGTCATAATTGTTCTACTACTACTTACAGCAATGCATCAAATGGTCTCTTGTTAAGAAATCCCGAGGGAAAGAACTCAGAGGTAGCTCAATGCTGTGGACATCGGTATGCTTCGATGCATGGGCGTTTTGAGGAGATAATGTACCAAGCTGACGAGTCTGAGCATCATACAGCAGAGGGTGCACCAAATGTGTCGAGTCATTCCGATTGCCTGAATTATCCTGAAATATGGGGACATCATGAAAGCCGTGAACTTAGTTCAATGAGCTCACGACAAAGCCATTCGGATGAAGATTACGAGAAAACAGATCAACCAGTTACAGTCATGGACACAAAAGAAATGATAATGGAAAGTAAAACTGCTCCTCATACGAGACGTACGCTTAGGAGCCTGATGAATTCCCTTTCTTTCTCAGAAACCGCTTCTCCTCCAGATATTAATGAGAATGATGTCCAACAAGAAATGAGATGGATTAAAGCCAAGTACCAAATAGAATTAAGCAAGCTCAGAGATCAACAGTTAAATCTTTCTTCAAAATCTTCAAGTTTTGAAGACGGGCAACAAAAAATGGAAAATGGGACTCTTCAAGGCAACCACAACCAAATCCTTGACAGGTCTGTTCAAGACACGAACCAAAGTAGTACTGGTAGCCATGTTTATATCGATAATAGCTGTTACAGTATAGACGCGCACAACCAAAGGGCTCAAAATCGCAAGGCTGTGGAGTCCCCTATTGTGGAGAAAGTTGCCACTGCCAAAAATGCCTGCAATGGTTCATTGCTTCCAAGCTCCCTTCATAGAACAATCTCTCTCCCAGTTGATGCTGTTCATATATAA 2361 40.62 MDGLSDLELDCSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDIANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILRGLHYLHSHEPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHADHCVGMIVKPNHLYHPLLKLYSFQGLFGLQVCESHGLHKFVLGNHLSAYTVGFFYIRTPEFMAPEVYAEAYNELVDIYSFGMCILEMITFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVRQFIDKCLASVSFRLSAAELLNDPFLQIDNGEYDLRPVDYGRGLDDVCPLIRQPYLELRRSDSSFCNGYPYDYSFEASSESGYHPIDNETNGIELFEYCEGEHSEDVDISIKGKMREDGGIFLRLRIADKEGRIRNIYFPFDVETDTALSVATEMVAELDITDQDVTRIADMIDGEIASLVPEWRPGPGIEETPRFANQSYCHNCSTTTYSNASNGLLLRNPEGKNSEVAQCCGHRYASMHGRFEEIMYQADESEHHTAEGAPNVSSHSDCLNYPEIWGHHESRELSSMSSRQSHSDEDYEKTDQPVTVMDTKEMIMESKTAPHTRRTLRSLMNSLSFSETASPPDINENDVQQEMRWIKAKYQIELSKLRDQQLNLSSKSSSFEDGQQKMENGTLQGNHNQILDRSVQDTNQSSTGSHVYIDNSCYSIDAHNQRAQNRKAVESPIVEKVATAKNACNGSLLPSSLHRTISLPVDAVHI 786
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 30873725 30877724 - ClCG02G016420.2 Cla02g01615 267741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01615 786 SUPERFAMILY Protein kinase-like (PK-like) 27 334 IPR011009 -
Cla02g01615 786 SMART serkin_6 24 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01615 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Cla02g01615 786 Gene3D Transferase(Phosphotransferase) domain 1 107 338 - -
Cla02g01615 786 Gene3D - 426 493 - -
Cla02g01615 786 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 239 775 - -
Cla02g01615 786 MobiDBLite consensus disorder prediction 591 611 - -
Cla02g01615 786 Pfam Protein kinase domain 27 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01615 786 Pfam Protein kinase domain 239 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01615 786 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 429 483 IPR024678 GO:0004674|GO:0005524
Cla02g01615 786 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 189 - -
Cla02g01615 786 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 239 775 - -
Cla02g01615 786 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 189 - -
Cla02g01615 786 CDD STKc_WNK 22 333 - -
Cla02g01615 786 Gene3D Phosphorylase Kinase; domain 1 10 105 - -
Cla02g01615 786 ProSiteProfiles Protein kinase domain profile. 24 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01615 Cla-Chr2:30873725 Cla02g01864 Cla-Chr2:33833122 9.36E-157 dispersed
Cla04g00650 Cla-Chr4:20944269 Cla02g01615 Cla-Chr2:30873725 1.77E-136 transposed
Cla06g00905 Cla-Chr6:14489112 Cla02g01615 Cla-Chr2:30873725 0 transposed
Cla02g01615 Cla-Chr2:30873725 Cla06g00582 Cla-Chr6:7111152 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80356 PF00069 Pkinase 1.70E-31 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01615 K08867 - csv:101219552 1328.15