Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01629 ATGGCATCGAGGTCTACAAAAAATGATGACATAGTTGAAGCGAAAACTCACCGGCGACGGTGGAGAATGGCCTTCGCTGCCATTTATTTCACCAGACTCCTCATTTCTCTATCGAAAAAAGTCGGCCACCGCAAGTTCTTGCCATCGCTTTCATATGTTACTATTCATATGCACCTCAATGATGATGCTGATGTTGACAGTATGGATTCCGACGAGCGTTCGTTCGTCGATCGAAAAGTTTTGAGCACGATGGTGAGGGAGAAGAATTTCGAGTGTTTGGATCGATTTGGAGGTGTTGAAGGACTCACTAATCTTCTCGAAACAAACTCCGAGAACGGAATCACCGCAACGAAAGATGATCTAATTTCTAGAAAAAATACTTTCGGGACAAATACTTATTTGAAGCTCCAGGGTAGAAGCTTCATGAGTTTTGTGATCGAAGCGTTTAACGATACGACGATGATTATTCTTTTGATATGTGCAGCGCTTTCCTTGGGATTTGGTATAAAACAACACGGTTGGGACGATGGATGGTACGACGGCGGCAGCATTGTCATCGCCATATTTCTTGTGGTTGTCGTTTCCGCCGTTAGCAACTTCAAGCAATCGAGGCAGTTTGAGAAGCTTTCAAATGAGAGAGACGACATAAAAATGGAGGTCACTAGAGCCAGTCGACGCAAACTTGTGTCGATATTTGACATCGTCGTTGGAGACATTGTGTATTTGAAGATCGGAGATCAGATTCCTGCCGACGGAGTGTTCCTCGAAGGACATTCGCTGAAAGTCGACGAGTCTCACATGACTGGAGAGAGTGATCATGTTGAAGTAAATCATGGAAGTAATCCGTTTTTGCTATCAGGAACCAAAGTGAGTGATGGTTTTGGTGTGATGATGGTTACTTCAGTGGGAATGAACACATCCTGGGGAGAAATGATGAGTTCAATCAGGCAGGAAGTTAATGAAGTTACTCCTTTGCAAGCTCGTTTAAACAAGATGACCATGGTGATTGGGAAGCTGGGGCTGACAGTCGCCGTGCTCGTACTTCTTGTTCTTCTTATTCGCTATTTCACCAGGAGCACCAGCGAGTTCAATGGAAGCAAGACGAGGTTCAATGATATCACGAATGCAGTTCTTGACATGGTTACGACTGCGGTTACGATCGTCGTCGTAGCAATACCGGAAGGTTTGCCTCTAGCTGTTACTTTAACTTTAGCTTACTCCATGAAAAAGATGATGGCAGATAATGCAATGGTTCGGAAACTCTCTGCTTGTGAGACAATGGGCTCAGCAACAACAATTTGTACAGATAAAACTGGCACCCTTACTTTGAATGAGATGAAAGTTATAGAGTTTTGGATTGGGGAAGATGAAATTATTGACAAAAATGTTTCCAATTCAAGGATTGTGACTGAGGTTGTTGAATTGCTGCACCAAGCAGTTGGCTTGAATACAACTGGTAGTGTTCAAAGATCATCTTCTTCATTACCTCTAGAAATATTCGGGAGTCCGACTGAGAAAGCGATACTTTCTTGGGGCGTCTTCAACTTGGATTTGAACCTACATGAATTGAAGAAGCAACATGAAATAATCCAAGTGGAGACTTTCAGTTCAGAGAAAAAGAGAAGCGGAGTTTCGGCAAGACGATACGGCGACAAGTTTATCCATACACATTGGAAGGGAGCAGCAGAGATGATATTGACAATGTGCTCATATTATTACAATAAACAAGGAACAGTTAGAGCCATTGATGATGAAGCAAGAAGACGATGGATTGCGATAATCACAACTATGGCAGGTAAAAGTCTCCGATGCATCGCCTTCGCCCACAGACTGAATGAACAAAGCGAAAATGCAGAAGTTCCAACGAAACTCGACGAATCGGGATTGACATTACTCGGAATAGTCGGTTTGAAGGATCCTTGCAGGCCAGGAGTTAGAGAAGCTATAGAATCATGTAAAGCTGCAGGAGTGAACATCAAAATGGTAACAGGTGATAATTTACACACAGCAACAGCCATAGCAATCGAATGTGGAATACTAAATCCCGATGACAATACGAACAGTGACGAAGTTGTAGTCGAGGGCGTAAGATTTAGAAACTACACACCTGAGGAGAGAGTAGAAAAGATTGGGAACATCAAAGTAATGGCTAGATCTTCCCCATTTGACAAGCTTCTTATGGTACAATGCTTGAAGAATTTAGGCCATGTAGTGGCAGTAACAGGGGATGGAACAAATGATGCCCCTGCTCTTCATGAGGCAGACATTGGTCTTTCCATGGGGATTCAAGGAACTGAAGTGGCAAAGGAGAGTTCGGATATCGTCATCTTAGATGACAACTTTACGTCAGTCGTCACGGTTTTGAAATGGGGAAGATGTGTTTACAACAACATCCAAAAGTTCATTCAATTTCAGCTCACAGTGAATATTGCAGCATTGGTAGTGAACTTCATTGCTGCTTTGTCTTCTGGCAAAGTCCCTTTAACAGCAGTTCAACTATTATGGGTGAATCTCATAATGGATACCATGGGAGCTTTAGCCTTAGCCACTGAGCTACCCACCAATGATCTCATGGCGAAAACACCTGTCGGTCGAACCGAACCGTTGGTGACGAAAGTCATGTGGAGGAACCTCATTGCACAGGCTGTGTATCAGGTGACAGTCTTGTTGGTTTTGGAATTTAAAGGAAGTGTCATCTTGAATGTAAATGGAAAGGTAAAGAACACACTCATTTTCAATACTTTTGTGCTATGCCAAATCTTCAATGAGTTCAATGCAAGGAAGATGGAGAAGAAGAATATATTTGAAGGGATACATAAAAGCAAGCTGTTTTTGGGAATAGTTGTGATAACTTTGGGTTTTCAAGTGGTAATGGTGGAGCTATTGGGAAGGTTTGCAAATACTGAGAAGTTGAATTGGGGCCAATGGGGAGTATGTATTGGCATTGCAGCTTTGTCTTGGCCAATTGGATGGCTTTCCAAGTTAATACCAGTTTCTGCCCTTCACTTTCCAAGGAGAACAAATTGA 3027 42.68 MASRSTKNDDIVEAKTHRRRWRMAFAAIYFTRLLISLSKKVGHRKFLPSLSYVTIHMHLNDDADVDSMDSDERSFVDRKVLSTMVREKNFECLDRFGGVEGLTNLLETNSENGITATKDDLISRKNTFGTNTYLKLQGRSFMSFVIEAFNDTTMIILLICAALSLGFGIKQHGWDDGWYDGGSIVIAIFLVVVVSAVSNFKQSRQFEKLSNERDDIKMEVTRASRRKLVSIFDIVVGDIVYLKIGDQIPADGVFLEGHSLKVDESHMTGESDHVEVNHGSNPFLLSGTKVSDGFGVMMVTSVGMNTSWGEMMSSIRQEVNEVTPLQARLNKMTMVIGKLGLTVAVLVLLVLLIRYFTRSTSEFNGSKTRFNDITNAVLDMVTTAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADNAMVRKLSACETMGSATTICTDKTGTLTLNEMKVIEFWIGEDEIIDKNVSNSRIVTEVVELLHQAVGLNTTGSVQRSSSSLPLEIFGSPTEKAILSWGVFNLDLNLHELKKQHEIIQVETFSSEKKRSGVSARRYGDKFIHTHWKGAAEMILTMCSYYYNKQGTVRAIDDEARRRWIAIITTMAGKSLRCIAFAHRLNEQSENAEVPTKLDESGLTLLGIVGLKDPCRPGVREAIESCKAAGVNIKMVTGDNLHTATAIAIECGILNPDDNTNSDEVVVEGVRFRNYTPEERVEKIGNIKVMARSSPFDKLLMVQCLKNLGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVLKWGRCVYNNIQKFIQFQLTVNIAALVVNFIAALSSGKVPLTAVQLLWVNLIMDTMGALALATELPTNDLMAKTPVGRTEPLVTKVMWRNLIAQAVYQVTVLLVLEFKGSVILNVNGKVKNTLIFNTFVLCQIFNEFNARKMEKKNIFEGIHKSKLFLGIVVITLGFQVVMVELLGRFANTEKLNWGQWGVCIGIAALSWPIGWLSKLIPVSALHFPRRTN 1008
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31045708 31048734 - ClCG02G016570.1 Cla02g01629 267755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01629 1008 Pfam haloacid dehalogenase-like hydrolase 431 755 - -
Cla02g01629 1008 Coils Coil 206 226 - -
Cla02g01629 1008 Pfam Cation transporter/ATPase, N-terminus 98 164 IPR004014 -
Cla02g01629 1008 SFLD p-type atpase 416 794 IPR044492 -
Cla02g01629 1008 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 440 645 IPR023299 GO:0000166
Cla02g01629 1008 SUPERFAMILY Calcium ATPase, transmembrane domain M 97 999 IPR023298 -
Cla02g01629 1008 Gene3D - 119 316 - -
Cla02g01629 1008 Gene3D - 431 786 IPR023214 -
Cla02g01629 1008 SUPERFAMILY HAD-like 432 845 IPR036412 -
Cla02g01629 1008 SUPERFAMILY Calcium ATPase, transduction domain A 218 314 IPR008250 -
Cla02g01629 1008 SFLD C1.7: P-type atpase like 416 794 - -
Cla02g01629 1008 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 81 998 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Cla02g01629 1008 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 707 822 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cla02g01629 1008 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 378 470 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cla02g01629 1008 Pfam E1-E2 ATPase 217 412 - -
Cla02g01629 1008 PANTHER CALCIUM-TRANSPORTING ATPASE 16 990 - -
Cla02g01629 1008 Pfam Cation transporting ATPase, C-terminus 826 996 IPR006068 -
Cla02g01629 1008 Gene3D - 147 993 - -
Cla02g01629 1008 PRINTS H+-transporting ATPase (proton pump) signature 590 608 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cla02g01629 1008 PRINTS H+-transporting ATPase (proton pump) signature 741 757 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cla02g01629 1008 PRINTS H+-transporting ATPase (proton pump) signature 773 798 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cla02g01629 1008 PRINTS P-type cation-transporting ATPase superfamily signature 263 277 - -
Cla02g01629 1008 PRINTS P-type cation-transporting ATPase superfamily signature 434 448 - -
Cla02g01629 1008 PRINTS P-type cation-transporting ATPase superfamily signature 633 644 - -
Cla02g01629 1008 PRINTS P-type cation-transporting ATPase superfamily signature 655 665 - -
Cla02g01629 1008 PRINTS P-type cation-transporting ATPase superfamily signature 741 760 - -
Cla02g01629 1008 PRINTS P-type cation-transporting ATPase superfamily signature 765 777 - -
Cla02g01629 1008 Gene3D - 444 640 IPR023299 GO:0000166
Cla02g01629 1008 ProSitePatterns E1-E2 ATPases phosphorylation site. 436 442 IPR018303 -
Cla02g01629 1008 PANTHER CATION TRANSPORTING ATPASE 16 990 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00281 Cla-Chr2:2759218 Cla02g01629 Cla-Chr2:31045708 8.70E-115 dispersed
Cla02g00283 Cla-Chr2:2765714 Cla02g01629 Cla-Chr2:31045708 2.02E-114 dispersed
Cla02g01629 Cla-Chr2:31045708 Cla11g01128 Cla-Chr11:22983121 0 dispersed
Cla02g01629 Cla-Chr2:31045708 Cla09g00688 Cla-Chr9:6679601 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01629 K01537 - csv:101218531 1751.1