Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01637 ATGGAATCGGGGCAGAACGATGAGTGCAGAGCGATCTTGATCAATTTCGAGCAAACGGAGCTCCGCCTGGGATTGCCCGGCGGCGAAATCGGCGGCGGAAAGAGTAATTCGGCTGGGAAGAGAGGGTTTATGGAAACTGTGGATTTGAAGCTTAATTTATCTTCTTCAATGGCGTCTGTGAAGGAGGAAGCGACGAATTTGGAAGAGATTAAAAGTTCTTCGCAACGGCCTAACGATTTTGCTAAACCTCCTTCCAAAGCACAAGTAGTGGGTTGGCCACCAGTTAGATCATCAAGGAAGAATTTGGGAGCGGCGAGGAACGGCGGCGATGACGGCGGCGCGTCGTTCGTAAAAGTTAGCGTGGACGGAAAGTGGGAATCAGAAGGAATGAAGGATTTCATGAATGAAAGAAAATTGGTAGACCTTTTGAATGGTTCAGAATATGTACCCACTTATGAAGACAAAGATGGAGATTGGATGCTTGTTGGAGATGTGCCATGGGAGATGTTTGTTGATTCATGCAAACGTTTGAGGATCATGAAAGAGTCTGAAGCCATTGGATTAGCCCCCTGTGTGTTCCTCCGCCGTCTTCAACCTCCCCGTTGCAACAACATCCTCCTCCCCACGGTTGCGCCCATTCTTCTCCGATCAGGTAGTAGGCCTTTCGGTGGCAGAACAACTGCCAAATATAGCACTGCAGCTGCTGTTGAAGATCCTATTACTCCATCTGTGAAAGTGAATTACACCCAGTTGTTAATCAATGGACAGTTTGTGGATTCAGTCTCAGGAAAAACTTTTCCTACTTTGGATCCAAGGACTGGGGGAGTCATTGCAAATGTTGCTGAAGGTGATGCTAAAGATGTTGATCTTGCAGTTTCTGCTGCACGCAGGGCGTTTGATGAAGGTCCTTGGCCTAGAATGACTGCTTATCATGCCGATGAAGTTGCAGCACTCGAAACATGGGATAATGGTAAAACATATGAACAATCAGCAAAAATTGAAGTCCCGATGTTCGTACGCCTCTTTCGATACTATGGCGGATGGGCGGATAAGATCCATGGACTCACAGTTCCTGCTGATGGCTCGTATCATGTGCAGACATTGCATGAACCGATTGGCGTGGCGGGTCAGATCATTCCATGGAACTTCCCTCTGCTTATGTTTGCTTGGAAGGTTGGTCCAGCGTTAGCATGTGGGAATACTATTGTTCTGAAGACAGCTGAGCAGACACCTTTGTCTGCTCTCTTTGTGGCTAAGCTATTGCATGAGGCTGGACTTCCTGAGGGCGTTCTGAATATTGTTTCGGGTTATGGACCCACTGTTGGTGCTGCTATTGCCAGTCATATGGAAGTTGATAAGCTTGCTTTTACCGGATCAACTGAAACAGGGAAGATTGTACTTGAATTAGCTGCAAAAAGCAATTTGAAGCCAGTAACGTTGGAGCTTGGTGGAAAATCCCCTTTCATTGTATGTGAGGATGCTGATGTAGACAAGGCTGTGGAGATGGCACACTTTGCTCTCTTCTTCAACCAGGGACAATGTTGCTGTGCTGGTTCTCGTACTTTCGTTCATGAAAAAGTATTCGACGAGTTTCTAGAAAAAGCAAGAAAACGAGCTGCGAACCGCGTTGTTGGTGATCCTTTCCTAGGTGGAATTGAGCAAGGTCCTCAGGTCGATGAAGAACAATTCAAAAAGATATTGAAATATATAAAACTTGGGATTGAAGGAGGAGCCACTCTTGAAGCAGGAGGAGAAAGGTTTGGTTCCAAGGGTTACTATGTCCAACCAACAGTTTTCTCAAATGTCAAGGATGACATGAAAATTGCACAGGAGGAGATTTTTGGTCCTGTACAAACAATCTTGAAATACAAAGAGATTGATGAGGTGATAAGGAGGGCAAATGCTAGTCCTTATGGGCTGGCTGCTGGAGTGTTTACTCAAAATATCGACACAGCTAACCGGTTGACACGTGCGTTGAGAGTAGGGTCAGTATGGATCAATTGCTTTGATATATTTGATGCTGCAGTTCCTTTTGGAGGGTACAAGATGAGTGGACATGGGAGAGAAAAGGGAATTTACAGCCTTAGCAATTACCTGCAAGTGAAGGCTGTTGTGACTCCTTTGGAAAAGCCTGCTTGGCTTTAG 2145 45.83 MESGQNDECRAILINFEQTELRLGLPGGEIGGGKSNSAGKRGFMETVDLKLNLSSSMASVKEEATNLEEIKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLGAARNGGDDGGASFVKVSVDGKWESEGMKDFMNERKLVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLAPCVFLRRLQPPRCNNILLPTVAPILLRSGSRPFGGRTTAKYSTAAAVEDPITPSVKVNYTQLLINGQFVDSVSGKTFPTLDPRTGGVIANVAEGDAKDVDLAVSAARRAFDEGPWPRMTAYHADEVAALETWDNGKTYEQSAKIEVPMFVRLFRYYGGWADKIHGLTVPADGSYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALFVAKLLHEAGLPEGVLNIVSGYGPTVGAAIASHMEVDKLAFTGSTETGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVEMAHFALFFNQGQCCCAGSRTFVHEKVFDEFLEKARKRAANRVVGDPFLGGIEQGPQVDEEQFKKILKYIKLGIEGGATLEAGGERFGSKGYYVQPTVFSNVKDDMKIAQEEIFGPVQTILKYKEIDEVIRRANASPYGLAAGVFTQNIDTANRLTRALRVGSVWINCFDIFDAAVPFGGYKMSGHGREKGIYSLSNYLQVKAVVTPLEKPAWL 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31170876 31187629 + ClCG02G016650.2 Cla02g01637 267763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01637 714 Gene3D - 124 193 - -
Cla02g01637 714 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 508 519 IPR016160 GO:0016491
Cla02g01637 714 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 253 702 IPR016162 GO:0016491
Cla02g01637 714 MobiDBLite consensus disorder prediction 67 93 - -
Cla02g01637 714 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 217 714 - -
Cla02g01637 714 ProSiteProfiles PB1 domain profile. 100 182 IPR000270 GO:0005515
Cla02g01637 714 CDD ALDH_F2BC 246 706 - -
Cla02g01637 714 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 217 714 - -
Cla02g01637 714 SUPERFAMILY ALDH-like 245 707 IPR016161 GO:0016491
Cla02g01637 714 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 480 487 IPR029510 GO:0016491
Cla02g01637 714 Pfam AUX/IAA family 126 190 IPR033389 -
Cla02g01637 714 Pfam AUX/IAA family 37 123 IPR033389 -
Cla02g01637 714 Pfam Aldehyde dehydrogenase family 257 704 IPR015590 GO:0016491
Cla02g01637 714 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 484 673 IPR016163 GO:0016620
Cla02g01637 714 SUPERFAMILY CAD & PB1 domains 112 181 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01637 Cla-Chr2:31170876 Cla06g00929 Cla-Chr6:15608741 1.76E-55 dispersed
Cla01g01428 Cla-Chr1:28755830 Cla02g01637 Cla-Chr2:31170876 1.79E-12 transposed
Cla01g01786 Cla-Chr1:32802509 Cla02g01637 Cla-Chr2:31170876 2.50E-36 transposed
Cla02g01678 Cla-Chr2:31646273 Cla02g01637 Cla-Chr2:31170876 2.63E-49 transposed
Cla02g01832 Cla-Chr2:33460980 Cla02g01637 Cla-Chr2:31170876 5.95E-13 transposed
Cla02g02255 Cla-Chr2:37667002 Cla02g01637 Cla-Chr2:31170876 5.38E-30 transposed
Cla06g00431 Cla-Chr6:5264023 Cla02g01637 Cla-Chr2:31170876 5.97E-61 transposed
Cla06g01016 Cla-Chr6:21540909 Cla02g01637 Cla-Chr2:31170876 0 transposed
Cla06g01634 Cla-Chr6:29857602 Cla02g01637 Cla-Chr2:31170876 1.23E-110 transposed
Cla06g01654 Cla-Chr6:30056618 Cla02g01637 Cla-Chr2:31170876 0 transposed
Cla07g00849 Cla-Chr7:23698655 Cla02g01637 Cla-Chr2:31170876 2.95E-33 transposed
Cla09g00097 Cla-Chr9:955896 Cla02g01637 Cla-Chr2:31170876 1.93E-29 transposed
Cla09g01595 Cla-Chr9:31974256 Cla02g01637 Cla-Chr2:31170876 1.50E-36 transposed
Cla11g01542 Cla-Chr11:29112558 Cla02g01637 Cla-Chr2:31170876 2.87E-23 transposed
Cla02g01637 Cla-Chr2:31170876 Cla06g00625 Cla-Chr6:7670123 5.63E-55 wgd
Cla02g01637 Cla-Chr2:31170876 Cla09g00698 Cla-Chr9:6792369 5.72E-49 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60681 PF00171 Aldedh 3.10E-163 CL0099 Cla TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01637 K00128 - csv:101202756 935.636