Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01647 ATGAATGCCAATACCCATGTGATGTTATCTCTTTTCTTCGTCTTGTTAGGGCTTTTCAATGGCGTTTATTCTGCTTCTGTTCTTGCTCCACCTCCAGATCCGCCATTGCTGTTGCGTTGTGGTTCTAACGATGAGGCCACTGATGATAATGGCCGAAAATGGACCTCTGATTCTAAATTTGTCGACCCTAAAAATACCTTAGCCGCACCTGCTGGATTTCAAGATCCGTCAATGACTTCGCAAGTTCCGTATACGGAAGCTAGGGTTTTCACCGCCGAGACGGCGTATAAATTTCCGATAAAACCTGGTAACCGTTACTGGCTTCGACTGCATTTTTACCCTTCTATATACGGACCTCATGATTCTGCACATTCTTATTTCACCGTCGCTGCGAATGATTTAATCCTTGTGAAGAATTTCAGTGCTTATCTCACATGTCAGGCCTTTACTCAGGCCTACATTATTCGCGAATTTACTCTTGCGGCTTCGGAATCTGAATCTTTGAATTTGACATTCACGCCTGTTTCTGGATTTGCTTTTGTCAATGGGATTGAATTGATTCAAATGCCTGAGATATTTGGGGAGGCTATAATGGTGGGTGCAAGGGAGCAGACAATGGATGTTACGGCGTCGAATATGCAGACGATGGTGAGATTGAACGTTGGCGGGAGCTACATTTCTCCCGCGAACGATTCCGGGCTGAGTAGAGCATGGTACGATGATTATCCTTATCTTTTTGGTGCTTCTGAGGGTGTTGTGATGGAAGCTTCTAAGAGATTGGTGATTGATTATAAAGATATGCCAAAGTATATTGGGCCTGTGGAACTTTACAAGTCTTTGAGATCAATGGGGTCAGCTAAAGATTTGAATGCGAATTACAATCTCACATGGTTGTTTCCTAATATTGATCCAGGGTTTATGTATCTTGTGAGGTTGCATTTCTGTGATCTGTCTTTGAGTAGGCCAAATCAGGTGGTGTTTGATGTGTTCATCAACAATCAAACTGCGGAAGCAAATGGGATTGATGTGATAGCTTGGGCGGGCGCTAGGGGGGTTCCGAAATTCAGGGATTATGTTGTGTTTTCTAATGAAGCACCAACGATGCAGCAAATTTGGCTGGCAATGCATCCTAAGATGTCAGAGGCACCCGAATTTGCGGATGCTATGTTGAATGGGGTTGAGATATTCAAGCTCGAATCCGAGAAGAACTTGGCAGGGAAGAATCCTCAACCCTCCGCCTTTAGGATGAAGGTTGAGGCTGAAACAGAGAGAAATTTTGAAGCAAAGGGCAACAATGTTGAAGTGATTGGTGGAGCTGCAGGGGGTGCTGCTGCGTTCGTTGTGGTGGCACTTTGCTTTGCAGTGTACCAAAGGAAGAGTAGAATGCCAGGGACTGATTCACACACAACTAGTTGGTTACCGATCTATGGGAATTCGCATTCGAGTGGGAGCAAATCGACAGTGTCTGGGAAGAGTACGGCAAGTAATTTGGCTCAAGGTTTGGCTCGACATTTCTCGCTTCCTGAGATTTTACATGCTACCAAAAACTTTAGTGAATCTAATGTGATTGGGGTTGGAGGATTTGGGAAGGTGTACAAGGGAGTGATTGATGGAGGGACAAAAGTTGCTATTAAAAGGTCAAACCCATCATCAGAACAAGGCGTTCACGAGTTCCTTACAGAAATTGATTTGCTTTCGAAGCTGAGGCACAAACATTTGGTGTCCTTGATTGGTTTTTGTGATGAAGAGAATGAGATGTGTTTAATTTATGATTACATGGGTTTAGGAACTCTGAGGGAACATTTGTATAAGACCAACAACAAAACTCGTCTCTCATGGAAGCAAAGGCTGGAGATTTGTATTGGAGCAGCTAGGGGACTTCATTACCTTCACACAGGAGCACAATATACCATTATTCATAGAGATGTTAAAACTACCAACATTCTCTTGGATGAAAACTGGGTTGCAAAGGTTTCCGATTTTGGGCTCTCGAAAACTGGTCCGAACATGGCTAATGGTCATGTTAGCACGGTAGTAAAGGGTAGCTTTGGCTACTTAGATCCGGAATACTTTCGAAGGCAACAACTGACTGAAAAATCTGATGTCTATTCATTTGGAGTTGTCCTGTTTGAAGTGTTATGTGCAAGGCCTGCTCTAAATCCAAGCCTACCGAAGGAACAGGTTAGTCTTGCAGATTGGGCGTTGCATTGTAAACGCAAAGGATTTCTCGAGGATCTCATCGACCCCCACCTCAAAGGGAAAATCACCCCTGAAAGCTTGAAGAAGTTTGCAGATGCTGCTGAGAAATGTCTTGATGACCATGGAGCTGAGCGACCGTCTATGGGCGATGTGTTATGGAACCTTGAATTTGCTCTCCAACTTCAGGAAAGTGCTGATGGTGGTTCGAGTCATAACTCGAGGATACACGAGGAAGATAGCCAGAGAAACCAAGACATGGCTGCACATTACAACAATCTCAGCCTTGGAAGTGAGCAAGAGTTACTTCAATCTAATGAACAAAACAGTACTGCAATCTTCTCTCAACTTGTCCATCCGACAGGCCGATAA 2568 44.04 MNANTHVMLSLFFVLLGLFNGVYSASVLAPPPDPPLLLRCGSNDEATDDNGRKWTSDSKFVDPKNTLAAPAGFQDPSMTSQVPYTEARVFTAETAYKFPIKPGNRYWLRLHFYPSIYGPHDSAHSYFTVAANDLILVKNFSAYLTCQAFTQAYIIREFTLAASESESLNLTFTPVSGFAFVNGIELIQMPEIFGEAIMVGAREQTMDVTASNMQTMVRLNVGGSYISPANDSGLSRAWYDDYPYLFGASEGVVMEASKRLVIDYKDMPKYIGPVELYKSLRSMGSAKDLNANYNLTWLFPNIDPGFMYLVRLHFCDLSLSRPNQVVFDVFINNQTAEANGIDVIAWAGARGVPKFRDYVVFSNEAPTMQQIWLAMHPKMSEAPEFADAMLNGVEIFKLESEKNLAGKNPQPSAFRMKVEAETERNFEAKGNNVEVIGGAAGGAAAFVVVALCFAVYQRKSRMPGTDSHTTSWLPIYGNSHSSGSKSTVSGKSTASNLAQGLARHFSLPEILHATKNFSESNVIGVGGFGKVYKGVIDGGTKVAIKRSNPSSEQGVHEFLTEIDLLSKLRHKHLVSLIGFCDEENEMCLIYDYMGLGTLREHLYKTNNKTRLSWKQRLEICIGAARGLHYLHTGAQYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMANGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLPKEQVSLADWALHCKRKGFLEDLIDPHLKGKITPESLKKFADAAEKCLDDHGAERPSMGDVLWNLEFALQLQESADGGSSHNSRIHEEDSQRNQDMAAHYNNLSLGSEQELLQSNEQNSTAIFSQLVHPTGR 855
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31260831 31263398 + ClCG02G016770.2 Cla02g01647 267773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01647 855 Gene3D Phosphorylase Kinase; domain 1 478 592 - -
Cla02g01647 855 Pfam Protein tyrosine and serine/threonine kinase 520 783 IPR001245 GO:0004672|GO:0006468
Cla02g01647 855 SUPERFAMILY Protein kinase-like (PK-like) 502 786 IPR011009 -
Cla02g01647 855 ProSiteProfiles Protein kinase domain profile. 517 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01647 855 ProSitePatterns Protein kinases ATP-binding region signature. 523 545 IPR017441 GO:0005524
Cla02g01647 855 PANTHER OS07G0166700 PROTEIN 27 838 IPR045272 GO:0004714|GO:0006468
Cla02g01647 855 Pfam Malectin-like domain 40 397 IPR024788 -
Cla02g01647 855 PANTHER RECEPTOR-LIKE PROTEIN KINASE ANXUR2 27 838 - -
Cla02g01647 855 SMART serkin_6 517 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01647 855 Gene3D Transferase(Phosphotransferase) domain 1 593 815 - -
Cla02g01647 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Cla02g01647 855 CDD STKc_IRAK 523 789 - -
Cla02g01647 855 Gene3D - 36 190 - -
Cla02g01647 855 Gene3D - 211 399 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01647 Cla-Chr2:31260831 Cla11g01796 Cla-Chr11:31629607 0 dispersed
Cla11g00458 Cla-Chr11:5188945 Cla02g01647 Cla-Chr2:31260831 1.84E-147 dispersed
Cla02g01647 Cla-Chr2:31260831 Cla04g00639 Cla-Chr4:20781889 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80358 PF12819 Malectin_like 4.50E-34 CL0202 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01647 - - csv:101219475 1561.2