Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01661 ATGGCTAACGCCAAAAATTCTCCCATTGCGGCTTCTGCTTCTGCAAGCAACCGGCCATCAGGTGATACTGGAAATTTTCACTCGTTAGAATGCTTCCCCAGACTTAGAGGGAAGAAAATGGTTAGCAATAGTGTTCATTCAGCTTTGGCATGTGATGACATCCTCACTGAAATCCTCCTCCGTTTGCCAGAGAAATCTGTTTTCAAATTTATTCTTGTGTCCAAAAGATGGCTATCCTTGATTTGTAATTTTTCTTTTCGTCGTAGTTATGAAAAACAATGGGGCGCACACACTCGTCTTTTTGGCTTTTTTGTATGCAATTTTCTTTACATTGACAGACCACAAGACGGGGTGAGGCGCCCGCGGCATGAGCCTGCTCTACCTCTACTTTCAACTTGTAAAGAGAGTGATGATCTAATGTCATCTGGAATCTTAAGGAAACTGGGCTATTTTATTGACTACTCTGATGGACTTCTTCTCTGTGGCCGGCACCCTAGACATTATTATGTCTGGGATTCTGTCACCAAGTATCGATGCCAACTTCCTCAACCTCAAAAGCACTACAAATATCTATGTACCGCATTCATGACAGAAGACCCTGGTGAAGGTGGCGGAGATATCGTATATAGAGTTGTTCGGGCAAACTGTGAATGCAGAGTCAATGTAATTAACACCATCTCCATAGAGACTTTCTCCTCATTGACTTGGACATGGAAGCAATCCACTCTTGTTTGTTCTTCAGATTTTGCTTTGAGCCCGTGGACTGTGGGTACTGTGATTAATGGAGTTATCCACTGGTTTGGAACATATCGAAGTTTAGCCATTTATGATCCCGGATTTGGAGAAAGGCGCATAACTTCAATCAAGCTACCGGTCGGTCAGCTGACTCATGACTATGAGGACTCCATTTTGGGAGTGTCATCCGATGGGCTTTTGCAGTATGGTCAAAGTGGGAAGCTTGGATTGGAGACATGGGTTCTCTACAAGGAACAAGATGACTCCTCATCACCATATACCATGGACGCTCATTGCGAGTACCAGTGGAAGTTACGACATAAATTAAACTACAAAGACATGTGGAAGCAGAACCCAAATTCAGGTATTCGCTCTAAAGAACCTCAAATATTATCGTTCATTCGTCGAAACTCCGACTCTGTTTTCATTAGGTTGGGATCAAACATCTACCACTGTAACATCAGAAGCAAAACACTGGAAGTGGTTCCTTACCATTGTGATGCTCTTTCTATTCCATGGGATTTTTGTAAAGTAGTGCCTTACTTTCAAAAGATCTGGCCCCATTCCCTTTTTCATATCCCCCCAAACACAGTTAAGCCTTATGCTTCATTTTCTGGAGGTACTCCAGTTAACATTATTGTAGGTTCTCATGTCTGGATTGAAGATCCAGAAGTTGCTTGGCTTGATGGACAGGTATCCAAGATTACAGGGCAGGAAGCTGAGATCGAAGCCAGCAATGGAAAAAAAGTTGTTGCAAAATTATCCAAAATATACCCCAAAGATATGGAGGCTCCAGCTGGTGGGGTTGATGACATGACGAAGCTATCTTACTTGCACGAGCCTGGAGTTTTACAAAATTTAAAAATTCGATATGAACTCAATGAAATCTATACATACACTGGCAATATTCTTATTGCAATTAATCCATTCCAAAGATTGCCTCATCTTTATGATGGTCATATGATGCAACAATACAAAGGAGCACCATTTGGAGAACTGAGTCCTCATGTTTTTGCTGTTGCTGATGTTGCATACAGGGCAATGATCAATGAGGGTAAAAGCAATTCAATTCTGGTCAGTGGTGAAAGTGGAGCAGGGAAAACTGAAACCACAAAAATGCTCATGCGGTACCTTGCATTTTTAGGTGGCCGGGCGGCTACTGAAGGACGGACAGTTGAGCAGCAAGTTCTTGAGTCAAATCCAGTGCTTGAAGCTTTTGGAAATGCTAAAACTGTCAGAAATAACAATTCCAGTCGCTTTGGTAAATTTGTTGAAATCCAGTTTGACAAGCATGGAAGAATCTCGGGAGCAGCTATCCGAACTTACCTCCTTGAGAGATCTCGTGTTTGCCAAGTTTCTGATCCTGAGCGCAATTACCATTGCTTTTACCTCCTTTGTGCTGCACCTCAGGAGGAAATTGAAAAATACAAGCTGGGAAATCCCAGGTCATTTCATTATCTAAATCAATCAAATTGCTATGAGCTGGTTGATGTAAGTGATGCTCATGACTATCTTGCCACTAGAAGAGCTATGGATGTTGTTGGAATAAGTGCTAAGGAGCAGGAAGCAATCTTTAGGGTTGTTGCTGCAATTCTTCATCTTGGAAACATTGAATTTACTAAGGGAAAAGAAGTTGATTCATCAGTTCCAAAAGATGACAAGGCCAAGTTCCATCTTAAAATGACTTCAGAGCTTCTCATGTGTGATAATGCTGGCCTTGAAGATGCATTATGCAAGCGTGTCATGATCACCCCTGAAGAAGTGATAAAACGTAGCTTGGATCCTCAAAGTGCAGCTGTTAGTCGTGATGGTTTAGCCAAAACTATATATTCTCGACTTTTTGACTGGCTGGTTGATAAAATTAATGTCTCAATTGGACAAGATCCTAATTCCAAGTCCCTGATTGGGGTCCTTGATATCTATGGTTTTGAAAGCTTCAAAGCTAACAGTTTTGAGCAGTTCTGTATTAATTTCACAAACGAGAAGTTACAGCAACATTTCAATCAGCACGTTTTCAAAATGGAACAGGAAGAATACACGAAAGAAGAGATTGATTGGAGTTACATTGAGTTTGTCGACAACCAAGATGTGTTAGACCTCATTGAAAAGAAACCCGGTGGAATTGTGGCTCTCCTTGATGAAGCTTGCATGTTTCCAAAGTCAACCCATGAGACATTTGCTAACAAGCTCTATCAGACTTTCAAAACACATAAGCGGTTTATAAAGCCAAAACTTTCTCGAACAGATTTTACCATTGCTCATTATGCTGGAGAGGTTTTATATCAATCTGAACAGTTTTTGGACAAAAACAAGGATTACGTTGTTCCTGAACATCAGGATTTGTTAGGTGCATCCAAATGTCCATTTGTTGCTGGCCTTTTCCCCCCTCTAAAAGAGGAATCTGCAAAATCTTCCAAGTTTTCTTCAATTGGGTCTCGCTTTAAGCTACAACTACAACAGTTAATGGAGACATTAAATTCCACAGAACCTCACTACATCAGATGTGTGAAGCCTAACAACCTCTTGAAACCTGCCATCTTTGAGAATGTCAACATTATGCAACAACTGCGTTGTGGTGGTGTCTTAGAGGCAATCAGAATCAGTTGTGCTGGGTACCCTACTCGCCGTGCATTCTTTGAATTCATTAACCGATTTGGAATTTTAGCTCAAGAATCCTTAGAAGGAAACTACGATGAAAAAACTGTGTGCAAAAAGATATTAGAAAAGCAGGGACTTAAAGGGTTTCAGATAGGTAAGACAAAAGTATTCCTGAGGGCTGGTCAGATGGCTGAATTAGATGCTCGGAGAGCAGAGGTATTGAGTAATGCAGCAAAGACTATTCAACGGCGCACACGAACCCATATTGCTCGTAAACAGTTCATCGCATTACGAAAGGCAACCATACACGTGCAATCTAGATGGAGAGGAAAACTGGCTTGCAAACTTTTCAAGAATTTGAAGAGGGAGGCAGCTGCTGTGAAAATTCAGAAAAATGCTCGAAGATTTCATGCGAGAACAGCCTACAAAAGACTACAAACCTCAGTGCTTTATGTGCAAACTGGTTTAAGGGCAATGGCAGCTAGGAACGAATTCAGATTTAGGAAGCAGACAAAGGCGGCAATTATCATTCAGGCTCGATGGCGATGCCATAAAGCTGCCTCATACTATAAGAAACTTCAGAGAGGCTCAATTATTGCACAATGTAGATGGAGGGGAAAAGCTGCTAGAAAAGAACTGAGAAAACTCAAATTGGCTGCAAGGGAGACTGGTGCACTTAAAGAAGCAAAGGACAAGTTAGAAAAGAAAGTGGAGGAACTTACTTGGCGCATACAGTTAGAAAAACGCCTAAGGACGGACCTGGAAGAGGCAAAAGCTCAGGAGATAGCGAAATTACAAAATTCTTTGCAAGAACTGCAGACTAAAGTTGACGAAACTAACTCATTGCTTGTAAAGGAGCGAGAGGCTGTGAAGAAGGCTGTTGAAGAAGCACCTCCCGTTATACAAGAAACCCAAGTTCTGGTTGAAGATACCAAGAAAATTGATGCTTTGACAACAGAAGTAGAAAGCTTAAAGACCTCATTGGAGACGGAGAAAAACAGAGCTGATGAATATGAGAAAAAATGTAGTGAAGTAGAACAGTCTAGAGAAGAACAACGTAAAAAGTTAGAAGATACAGAGAAAAAAGCTCATCAGCTCCAGGAGTCATTGACCAGGCTAGAAGAGAAGCTTTCCAATTTGGAATCAGAGAATCAAGTTTTACGTCAACAAGCTGTGTCTATGGCACCTAATAAACTCCTCTCAGGACGGTCTAGATCAATTCTTCAGAGAGGTGCTGAAAGTGGTCATTACGGAGGGGAAGGGAGGACACCTTTGGATCTTCACAGCCCCTCTATTAACCAAAGGGATTCAGAAGTGGAGGATAAACCTCAAAAATCACTTAATGAAAAACAGCAAGAGAATCAAGAATTGCTCATCAGATGTATTGCACAGCACCTTGGCTTTGCAGCAAACAGACCTATTGCTGCTTGTATCATCTACAAGTGCCTGCTTCAGTGGAGGTCATTTGAAGTCGAACGCACCAGTGTGTTTGATAGGATAATTCAAACTATAGGCCATGCAATTGAGACTCAGGATAACAATGACGTCTTGGCCTATTGGTTATCCAACGCTTCAACGCTTCTCTTACTGCTTCAGCGTACATTGAAAGCAAGTGGTGCTGCTGGAATGGCTCCGCAGCGTCGGAGATCGTCAGCTACACTATTTGGGAGGATGACTCAAAGTTTCCGAGGAGCTCCACAAGGAGTCAATCTATCCTTAATCAATGGTGGAACTAGTGGTGGAGTGGACACTTTAAGGCAAGTTGAAGCGAAGTACCCTGCTTTGCTTTTCAAGCAGCAGCTGACAGCCTATGTAGAGAAAATTTATGGAATGATTAGAGATAATCTGAAGAAAGAAATTTCTCCATTGCTTGGATTGTGCATCCAGGCACCAAGAACATCAAGGGCAAGTTTGGTGAAGGGATCTTCTCGTTCTGTTGCCAACACGGAGGCCCAGCGTGCCTTAATTGCTCACTGGCAAGGAATCGTGAAGAGCCTTGGAAACTTCTTAAACACCTTAAAAGCAAATCATGTACCCCCATTTTTGGTTCGCAAAGTCTTCATTCAAATATTTTCTTTCATCAACGTTCAACTATTCAACAGTCTTCTATTACGACGAGAATGTTGTTCATTTAGCAATGGCGAATACGTCAAAGCTGGGCTGTCTGAATTAGAGCATTGGTGCTATAAAGCTACTGATGAGTACGCAGGTTCTGCTTGGGACGAGCTAAAGCATATTAGACAAGCGATCGGGTTTCTGGTCATTCATCAGAAGCCAAAGAAGACACTAGATGAAATAAGTCACGATCTGTGTCCGGTACTAAGTATACAGCAGCTGTATCGTATAAGTACAATGTACTGGGACGACAAATATGGCACTCATAGTGTTTCACCTGATGTAATATCCAATATGAGGGTGTTAATGACCGAAGATTCGAACCATGCAATAAGCAATTCATTTCTATTGGATGACGATTCAAGCATTCCATTCTCAGTTGATGATTTATCAAAGTCTATGGAACAAATAGACATTGGAGACATCGAACCGCCACCTCTGATTCGGGAGAACTCGGGCTTTAGTTTCTTGTTACCACGAACGGACTAA 5937 41.76 MANAKNSPIAASASASNRPSGDTGNFHSLECFPRLRGKKMVSNSVHSALACDDILTEILLRLPEKSVFKFILVSKRWLSLICNFSFRRSYEKQWGAHTRLFGFFVCNFLYIDRPQDGVRRPRHEPALPLLSTCKESDDLMSSGILRKLGYFIDYSDGLLLCGRHPRHYYVWDSVTKYRCQLPQPQKHYKYLCTAFMTEDPGEGGGDIVYRVVRANCECRVNVINTISIETFSSLTWTWKQSTLVCSSDFALSPWTVGTVINGVIHWFGTYRSLAIYDPGFGERRITSIKLPVGQLTHDYEDSILGVSSDGLLQYGQSGKLGLETWVLYKEQDDSSSPYTMDAHCEYQWKLRHKLNYKDMWKQNPNSGIRSKEPQILSFIRRNSDSVFIRLGSNIYHCNIRSKTLEVVPYHCDALSIPWDFCKVVPYFQKIWPHSLFHIPPNTVKPYASFSGGTPVNIIVGSHVWIEDPEVAWLDGQVSKITGQEAEIEASNGKKVVAKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHLYDGHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKHGRISGAAIRTYLLERSRVCQVSDPERNYHCFYLLCAAPQEEIEKYKLGNPRSFHYLNQSNCYELVDVSDAHDYLATRRAMDVVGISAKEQEAIFRVVAAILHLGNIEFTKGKEVDSSVPKDDKAKFHLKMTSELLMCDNAGLEDALCKRVMITPEEVIKRSLDPQSAAVSRDGLAKTIYSRLFDWLVDKINVSIGQDPNSKSLIGVLDIYGFESFKANSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPKLSRTDFTIAHYAGEVLYQSEQFLDKNKDYVVPEHQDLLGASKCPFVAGLFPPLKEESAKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFGILAQESLEGNYDEKTVCKKILEKQGLKGFQIGKTKVFLRAGQMAELDARRAEVLSNAAKTIQRRTRTHIARKQFIALRKATIHVQSRWRGKLACKLFKNLKREAAAVKIQKNARRFHARTAYKRLQTSVLYVQTGLRAMAARNEFRFRKQTKAAIIIQARWRCHKAASYYKKLQRGSIIAQCRWRGKAARKELRKLKLAARETGALKEAKDKLEKKVEELTWRIQLEKRLRTDLEEAKAQEIAKLQNSLQELQTKVDETNSLLVKEREAVKKAVEEAPPVIQETQVLVEDTKKIDALTTEVESLKTSLETEKNRADEYEKKCSEVEQSREEQRKKLEDTEKKAHQLQESLTRLEEKLSNLESENQVLRQQAVSMAPNKLLSGRSRSILQRGAESGHYGGEGRTPLDLHSPSINQRDSEVEDKPQKSLNEKQQENQELLIRCIAQHLGFAANRPIAACIIYKCLLQWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSATLFGRMTQSFRGAPQGVNLSLINGGTSGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFIQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNHAISNSFLLDDDSSIPFSVDDLSKSMEQIDIGDIEPPPLIRENSGFSFLLPRTD 1978
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31426214 31444499 - ClCG02G016920.2 Cla02g01661 267787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01661 1978 SMART MYSc_2a 507 1183 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cla02g01661 1978 ProSiteProfiles IQ motif profile. 1304 1333 IPR000048 GO:0005515
Cla02g01661 1978 Gene3D - 1183 1234 - -
Cla02g01661 1978 Gene3D - 1235 1282 - -
Cla02g01661 1978 Gene3D - 1283 1332 - -
Cla02g01661 1978 ProSiteProfiles IQ motif profile. 1256 1285 IPR000048 GO:0005515
Cla02g01661 1978 ProSiteProfiles IQ motif profile. 1208 1237 IPR000048 GO:0005515
Cla02g01661 1978 Gene3D Myosin VI head, motor domain, U50 subdomain 762 1051 - -
Cla02g01661 1978 Gene3D - 702 760 - -
Cla02g01661 1978 MobiDBLite consensus disorder prediction 1439 1479 - -
Cla02g01661 1978 Pfam F-box domain 52 87 IPR001810 GO:0005515
Cla02g01661 1978 PANTHER MYOSIN 455 1975 - -
Cla02g01661 1978 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 488 1235 IPR027417 -
Cla02g01661 1978 MobiDBLite consensus disorder prediction 1523 1561 - -
Cla02g01661 1978 Pfam IQ calmodulin-binding motif 1187 1205 IPR000048 GO:0005515
Cla02g01661 1978 Pfam IQ calmodulin-binding motif 1282 1302 IPR000048 GO:0005515
Cla02g01661 1978 Pfam IQ calmodulin-binding motif 1235 1254 IPR000048 GO:0005515
Cla02g01661 1978 Pfam IQ calmodulin-binding motif 1209 1228 IPR000048 GO:0005515
Cla02g01661 1978 Pfam Myosin head (motor domain) 514 1170 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cla02g01661 1978 Pfam DIL domain 1797 1900 IPR002710 -
Cla02g01661 1978 Gene3D Kinesin motor domain 515 1112 IPR036961 -
Cla02g01661 1978 Gene3D - 889 1073 - -
Cla02g01661 1978 MobiDBLite consensus disorder prediction 1 21 - -
Cla02g01661 1978 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 458 507 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cla02g01661 1978 PANTHER MYOSIN-9 455 1975 - -
Cla02g01661 1978 SUPERFAMILY F-box domain 52 102 IPR036047 GO:0005515
Cla02g01661 1978 Pfam Myosin N-terminal SH3-like domain 459 501 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cla02g01661 1978 CDD MyosinXI_CBD 1560 1944 IPR037975 GO:0007015
Cla02g01661 1978 Gene3D - 1117 1180 - -
Cla02g01661 1978 MobiDBLite consensus disorder prediction 1544 1560 - -
Cla02g01661 1978 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1235 1333 IPR027417 -
Cla02g01661 1978 SMART iq_5 1184 1206 IPR000048 GO:0005515
Cla02g01661 1978 SMART iq_5 1232 1254 IPR000048 GO:0005515
Cla02g01661 1978 SMART iq_5 1255 1277 IPR000048 GO:0005515
Cla02g01661 1978 SMART iq_5 1280 1302 IPR000048 GO:0005515
Cla02g01661 1978 SMART iq_5 1207 1229 IPR000048 GO:0005515
Cla02g01661 1978 SMART iq_5 1303 1325 IPR000048 GO:0005515
Cla02g01661 1978 Coils Coil 1327 1400 - -
Cla02g01661 1978 ProSiteProfiles IQ motif profile. 1281 1308 IPR000048 GO:0005515
Cla02g01661 1978 ProSiteProfiles IQ motif profile. 1233 1260 IPR000048 GO:0005515
Cla02g01661 1978 ProSiteProfiles Myosin motor domain profile. 512 1182 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cla02g01661 1978 ProSiteProfiles Dilute domain profile. 1609 1921 IPR002710 -
Cla02g01661 1978 CDD MYSc_Myo11 526 1170 IPR036018 -
Cla02g01661 1978 PRINTS Myosin heavy chain signature 542 561 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cla02g01661 1978 PRINTS Myosin heavy chain signature 599 624 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cla02g01661 1978 PRINTS Myosin heavy chain signature 646 673 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cla02g01661 1978 PRINTS Myosin heavy chain signature 879 907 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cla02g01661 1978 PRINTS Myosin heavy chain signature 932 960 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cla02g01661 1978 SMART DIL_2 1796 1903 IPR002710 -
Cla02g01661 1978 Coils Coil 1425 1501 - -
Cla02g01661 1978 ProSiteProfiles IQ motif profile. 1185 1212 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01661 Cla-Chr2:31426214 Cla03g01472 Cla-Chr3:30225431 0 dispersed
Cla02g01661 Cla-Chr2:31426214 Cla05g00393 Cla-Chr5:3553666 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01661 K10357 - csv:101206606 2898.23