Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01676 | ATGAAATTTGCTTCGTTGATTCAGTTTGAGTTGATCGGAAGATCCAAAACCTTCATCATTGGCGGCAGAAATTGCCACCGGAAACACGTCGAAGACGGTTCAAATCCGGCGGCGGATATGGCGGATAAAGGCAGAGACGGCGGCCACTCGAGTTTACTCGACGGGAAGTACGAATTAGGCCGTCTTCTAGGGCATGGAACCTTCGCTAAGGTTTATCATGCTCGGAATCTGCGAACGGGGAAGAGCGTCGCGATGAAAGTGGTTGGGAAGGAGAAGATCATTAAAGTCGGCATGACGGAGCAGATCAAGAGAGAAATCTCTGTGATGAAAATGGTGAAGCATCCGAATATTGTGGAGCTTCATGAGGTGATGGCGAGTAAATCGAAGATCTATTTCGCGATGGAGTTCGTTAGAGGCGGTGAACTGTTCTCCAAAATCGCGAAAGGTCGGTTGCGAGAGGATGTGGCTAGGGTTTACTTTCAGCAATTAATCTCTGCAATCGATTTCTGCCATAGCCGTGGAGTTTACCACCGTGATCTGAAACCGGAAAACCTCCTACTCGACGAAGACGGTAACCTCAAGGTCACCGACTTCGGCCTCACCGCCTTCTCAGAGCACTTGAAGCAAGACGGATTGTTGCATACAACGTGTGGAACTCCGGCGTACGTCGCGCCGGAGGTCATCGGAAAGCAAGGATACGACGGCGCGAAGGCCGATCTGTGGTCTTGTGGAGTCATCCTTTACGTTCTTCTCGCCGGATACCTTCCATTCCAGGATGACAACATGGTGGCGATGTACCGGAAGATTTACAGAGGCGACTTCAAGTGTCCGCCGTGGTTCTCTCCCGAAGCCCGTCGGCTAATCACGAAGCTTCTAGATCCTAATCCAGTGACCAGAGTCGGTATCGCGAAGATTACATCGTCCTCGTGGTTCAAGAAATCGGTACCCAAGACTCTGAGTACGAAGGAGGAGCAAGAACAAACAGAGGAGAATTTCACGAAATCAAAGCCACCGGCGGAAACATTGAACGCGTTCCACATAATATCTCTATCGGAAGGTTTTGATCTGTCGCCGTTGTTCGAGGAGAAGAAAAGGGAGGAGAAAGAGGAGATGAGATTCGCGACTTCGTCGCCGGCGAGCAGTGTGATATCGAAGCTTGAGGAAGTGGCGAAGTCAGTGAAGTTCGATGTGAAGAAGAGCGAATCGTGGGTTCGATTGCAGGGGCAAGAGAAAGGGAGAAAGGGGAAACTGACGATCGCGGCGGATATCTTTGCGATGACGCCGTCGTTTGTGGTGGTGGAGGTGAAGAAGGACAACGGAGATACTTTGGAGTATAATCAGTTCTGCAGGAAGGAGCTCCGGCCGGCATTGAAGGACATTGTTTGGACTTCTCCGACGGGAAACTCGACCCCAGCTTGA | 1419 | 50.88 | MKFASLIQFELIGRSKTFIIGGRNCHRKHVEDGSNPAADMADKGRDGGHSSLLDGKYELGRLLGHGTFAKVYHARNLRTGKSVAMKVVGKEKIIKVGMTEQIKREISVMKMVKHPNIVELHEVMASKSKIYFAMEFVRGGELFSKIAKGRLREDVARVYFQQLISAIDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLTAFSEHLKQDGLLHTTCGTPAYVAPEVIGKQGYDGAKADLWSCGVILYVLLAGYLPFQDDNMVAMYRKIYRGDFKCPPWFSPEARRLITKLLDPNPVTRVGIAKITSSSWFKKSVPKTLSTKEEQEQTEENFTKSKPPAETLNAFHIISLSEGFDLSPLFEEKKREEKEEMRFATSSPASSVISKLEEVAKSVKFDVKKSESWVRLQGQEKGRKGKLTIAADIFAMTPSFVVVEVKKDNGDTLEYNQFCRKELRPALKDIVWTSPTGNSTPA | 472 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 31599010 | 31600543 | + | ClCG02G017100.2 | Cla02g01676 | 267802 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01676 | 472 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 175 | 187 | IPR008271 | GO:0004672|GO:0006468 | |
Cla02g01676 | 472 | Gene3D | Transferase(Phosphotransferase) domain 1 | 139 | 337 | - | - | |
Cla02g01676 | 472 | SMART | serkin_6 | 57 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01676 | 472 | PANTHER | - | 49 | 469 | - | - | |
Cla02g01676 | 472 | SUPERFAMILY | Protein kinase-like (PK-like) | 54 | 330 | IPR011009 | - | |
Cla02g01676 | 472 | Pfam | Protein kinase domain | 57 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01676 | 472 | ProSiteProfiles | NAF domain profile. | 337 | 361 | IPR018451 | GO:0007165 | |
Cla02g01676 | 472 | ProSitePatterns | Protein kinases ATP-binding region signature. | 63 | 90 | IPR017441 | GO:0005524 | |
Cla02g01676 | 472 | Pfam | NAF domain | 340 | 399 | IPR004041 | GO:0007165 | |
Cla02g01676 | 472 | CDD | STKc_SnRK3 | 56 | 310 | - | - | |
Cla02g01676 | 472 | CDD | CIPK_C | 343 | 458 | - | - | |
Cla02g01676 | 472 | ProSiteProfiles | Protein kinase domain profile. | 57 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01676 | 472 | Gene3D | Phosphorylase Kinase; domain 1 | 31 | 138 | - | - | |
Cla02g01676 | 472 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 49 | 469 | - | - | |
Cla02g01676 | 472 | Gene3D | Kinase associated domain 1, KA1 | 338 | 463 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g02325 | Cla-Chr1:37043416 | Cla02g01676 | Cla-Chr2:31599010 | 0 | dispersed | |
Cla02g01676 | Cla-Chr2:31599010 | Cla03g00713 | Cla-Chr3:8613905 | 0 | dispersed | |
Cla02g01676 | Cla-Chr2:31599010 | Cla06g01224 | Cla-Chr6:25477279 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80359 | PF00069 | Pkinase | 1.00E-72 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01676 | - | K07198 | csv:101208458 | 830.476 |