Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01678 CAAATTCAGCCACATACTTCCACCAATCTTTCTCTTGTTTTTATCTCTTTCAATTTTTTCTTTCTTTCTTTCTCAAGAATCTCCTCAAAATTCCCCATTTCCCCATTTCCCCAATTCCTTTTCTCATCAATTTCCATGGCGGGTAATGGGGTTTTTGCAGAGATTCTCGATGGTGAAGTCTACAAATACTATTCCGAAGGTGAGTGGAAGAAATCCTCCTCCGGGAAAACCGTTGCCATTATCAACCCCACTACAAGGAAGACTCAGTACAGAGTTCAAGCTTGCAACCAAGAGGAGGTTAATAAAGTGATGGAAATAGCCAAAACTGCTCAAAAATCATGGGCAAAGACTCCATTGTGGAAGAGAGCAGAGCTTCTTCATAAAGCTGCTGCAATTTTGAAAGAACACAAAGCTCCCATTGCTGAGTGTTTGGTGAAGGAAATTGCAAAACCAGCCAAAGATGCAGTGACTGAGCTTTTACTGTGGAAATGTGAGGTTGTGGTAATGGGTTTGAATGGTGCGAAGGTCGTGAGGTCTGGGGATCTTGTTTCATATTGTGCTGAAGAAGGTGTTAGGATCTTGGGAGAGGGGAAGTTCTTGGTTTCTGACAGTTTCCCTGGAAATGAAAGGACCAAATATTGCCTTACTTCCAAGATCCCTCTTGGTGTGATTTTAGCCATTCCTCCATTCAACTATCCTGTCAATTTGGCTGTTTCAAAAATTGCCCCGGCTTTGATTGCTGGAAATTCTATCGTCCTCAAGCCTCCAACTCAGGGAGCTGTTTCTGCTCTCCACATGGTACATTGCTTCCACCTAGCTGGTTTTCCTAAAGGCCTCATTAGTTGTGTCACTGGAAAAGGTTCCGAGATCGGTGATTTCCTCACTATGCATCCGGGTGTCGACTGTATAAGCTTTACCGGTGGGGATACTGGTATTGCAATTTCGAAGAAGGCAGGCATGATACCTCTTCAGATGGAACTGGGAGGCAAAGACGCCTGCATTGTGCTCGAGGATGCAGATCTCGATTTAGTTGCTGCTAACATCATAAAGGGAGGCTTTTCTTACAGTGGCCAAAGGTGTACTGCCGTAAAGGTTGTTTTGGTAATGGAGTCCGTTGCAGATGCTTTGGTCGAGAAAGTAAAGGCACGGGTGGCTAAATTAACCGTTGGTGCTCCTGAAGACGACTCAGACATTACTCCAGTTGTGACTGAGTCGTCAGCGAATTTCATTGAAGGGTTGGTAATGGATGCAAAGGAAAAGGGAGCAACATTTTGCCAAGAGTACAGAAGAGAGGGCAACCTCATTTGGCCCTTGTTGTTAGATAATGTTAGGCCTGATATGAGGATTGCATGGGAGGAACCTTTTGGACCAGTCTTGCCAGTCATTAGGATCAGTTCTATTGAAGAAGGAATCCACCATTGTAATGCTAGCAACTTTGGACTTCAGGGATGTGTATTCACAAAGGACATCAACAAGGCGATATTGATAAGTGACGCAATGGAAACTGGAACAGTTCAAATCAACTCTGCACCTGCTCGAGGACCTGATCATTTCCCATTCCAGGGAATCAAGGACAGTGGAATTGGTTCTCAAGGTGTTACCAACAGCATCAACATGATGACTAAAGTGAAGACCACAGTTATCAACTTGCCAACACCTTCCTACACCATGGGTTAG 1677 44.31 QIQPHTSTNLSLVFISFNFFFLSFSRISSKFPISPFPQFLFSSISMAGNGVFAEILDGEVYKYYSEGEWKKSSSGKTVAIINPTTRKTQYRVQACNQEEVNKVMEIAKTAQKSWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTELLLWKCEVVVMGLNGAKVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVSALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVDCISFTGGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVKARVAKLTVGAPEDDSDITPVVTESSANFIEGLVMDAKEKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRISSIEEGIHHCNASNFGLQGCVFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGVTNSINMMTKVKTTVINLPTPSYTMG 558
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31646273 31650417 - ClCG02G017120.1 Cla02g01678 267804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01678 558 PANTHER ALDEHYDE DEHYDROGENASE 46 558 - -
Cla02g01678 558 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 329 553 IPR016163 GO:0016620
Cla02g01678 558 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 353 364 IPR016160 GO:0016491
Cla02g01678 558 CDD ALDH_F11_NP-GAPDH 60 549 - -
Cla02g01678 558 SUPERFAMILY ALDH-like 59 549 IPR016161 GO:0016491
Cla02g01678 558 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 325 332 IPR029510 GO:0016491
Cla02g01678 558 Pfam Aldehyde dehydrogenase family 69 545 IPR015590 GO:0016491
Cla02g01678 558 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 55 328 IPR016162 GO:0016491
Cla02g01678 558 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 46 558 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01678 Cla-Chr2:31646273 Cla06g01654 Cla-Chr6:30056618 3.16E-57 dispersed
Cla02g01678 Cla-Chr2:31646273 Cla02g01637 Cla-Chr2:31170876 2.63E-49 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01678 K00131 - csv:101208699 950.658