Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01687 ATGTGTGTGACGGATGCAGAGCAGGTTGGGACTGAGAGACCAACTTCTGGGGTTAATAATACCAAGCCATGGCCAATACATTGTGAATTTTTGCAGAATCAGATGGGGAATCCTGATAAGGAGCCTGCTCTAACTGGAACTAGCGACCGAACTCGCTCTGGGAATTCTTTTCCTCTAGAAAGCATATCTGAGGATGCTGCCGTTATAGACAGGAAAGAGAACCCATCTACTTTTGTTCCAGCTCTTAGATCAGGAGAATGGTCTGACATCGGAAAGCGTCCTTATATGGAGGACACTCATGTATGCATTCATGACATGGCTAAGAAGTTTGGCTGTAGCTTTCTTAATGAGGAAGCTGTCTCCTTCTATGGTAGTAAAACTGTTGTTCCTGAGGTATTTGACGGTCATGGAGGAAAAGCCGCTGCACAGTTTGTTCGTGACCACTTGCCGAGAGTCATTGTTGAAGATTCTGACTTTCCTTTAGAACTTGAAAAGGTCGTCACAAGGTCATTTATGGAGACTGATGCAGCTTTTGCTAGATCTTGCACTCTTGAAACATCTCTATCTTCTGGCACAACTGCCCTGACTGCAATGATATTTGGAAGGTCTTTGCTTGTAGCAAATGCTGGTGATTGCCGAGCAGTACTGTCAAGACAAGGATGTGCAGTAGAAATGTCCAAAGACCACAGGCCATGCTGCACAAAAGAAAGAAAGCGAATCGAGGCCTTGGGCGGATTCATTGATGATGATTACCTAAACGGCCTGCTCGGTGTTACACGTGCGATAGGAGATTGGCATCTTGAAGGAATGAAGGAAATGAGTGAAAGAGGTGGACCATTAAGTGCAGAACCTGAACTTAGATTAATGACATTGACAAAGGAAGACGAGTTCTTGATCATAGGTAGTGATGGAATATGGGACGTCTTCACAAGTCAAAACGCTATCGATTTTGCTCGGAGGAGGCTCCAAGAGCACAATGATGTGAAAATTTGCTGCAAGGAAATAGTGGAGGAAGCCATAAAGAGAGGAGCAACAGACAATTTAACAGTAGTGTTGGTTAGCTTTCATTTGGAACCTCCTCCACCTGTAGTTTTTCAAAGGCCAAGATTTAGAAGAAGCATTTCTGCTGAGGGACTTCAGAACCTCAAATTTCTTCTAGAAGGATAG 1167 44.04 MCVTDAEQVGTERPTSGVNNTKPWPIHCEFLQNQMGNPDKEPALTGTSDRTRSGNSFPLESISEDAAVIDRKENPSTFVPALRSGEWSDIGKRPYMEDTHVCIHDMAKKFGCSFLNEEAVSFYGSKTVVPEVFDGHGGKAAAQFVRDHLPRVIVEDSDFPLELEKVVTRSFMETDAAFARSCTLETSLSSGTTALTAMIFGRSLLVANAGDCRAVLSRQGCAVEMSKDHRPCCTKERKRIEALGGFIDDDYLNGLLGVTRAIGDWHLEGMKEMSERGGPLSAEPELRLMTLTKEDEFLIIGSDGIWDVFTSQNAIDFARRRLQEHNDVKICCKEIVEEAIKRGATDNLTVVLVSFHLEPPPPVVFQRPRFRRSISAEGLQNLKFLLEG 388
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 31763415 31769040 + ClCG02G017220.2 Cla02g01687 267813
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01687 388 MobiDBLite consensus disorder prediction 35 58 - -
Cla02g01687 388 SMART PP2C_4 73 353 IPR001932 -
Cla02g01687 388 CDD PP2Cc 83 355 IPR001932 -
Cla02g01687 388 Pfam Protein phosphatase 2C 96 347 IPR001932 -
Cla02g01687 388 Gene3D - 66 358 IPR036457 -
Cla02g01687 388 SUPERFAMILY PP2C-like 73 356 IPR036457 -
Cla02g01687 388 ProSiteProfiles PPM-type phosphatase domain profile. 83 355 IPR001932 -
Cla02g01687 388 MobiDBLite consensus disorder prediction 1 23 - -
Cla02g01687 388 PANTHER PROTEIN PHOSPHATASE 2C 1 376 IPR015655 GO:0004722|GO:0006470
Cla02g01687 388 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 376 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01687 Cla-Chr2:31763415 Cla11g01835 Cla-Chr11:31986111 6.44E-108 dispersed
Cla02g01687 Cla-Chr2:31763415 Cla09g00444 Cla-Chr9:4222654 3.01E-84 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
60684 PF00481 PP2C 3.10E-63 CL0238 Cla TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01687 K14803 - csv:101210349 718.383