Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01709 | ATGGGGAGCTGTTTGTCTACTGGCAATCAGAATAGTTGCAGAAGTGGAAGGAATGGAGAGAGAGTTTCTGGATCCTGTTTGGGAATTGGAGTTTGTGGCCGGATTGAAAGAAAGAGAACATTCTCAGATCATATTTTTTCTCTGCAGCATTTGAATTCTGTTTCTAATAGACTCGTTTATAATGGGAAGACTCGAAATTCTTGTATTTTCACTCAGCAGGGTCGAAAGGGTATAAACCAAGACGCTATGGTTGTATGGGAAGACTTCATATCAGATGGTGCAATTTTCTGTGGGGTATTTGATGGCCACGGTCCTCATGGTCATGTCGTTGCACGAAAAGTTAGAGATGTTCTGCCGAGAAAGCTAGTGTCATTCTGGCAGTCATCTCAGTTGAAGCATAATAGATCAGATAGAACTTCTTGTCTCCCGTGGAGTCAGAAGGATTCAGCAGATGGTGAAGGACAGAACATAGATGCCTCAGAGGAGGATAAATCAAGTTCTTTATGGAGAACAGCTTTCCTCAAATCATATAAAGCCATGGATAAGGAGCTCAAGTCTCATCCCAAATTGGACTGTTTCTGTAGTGGCAGTACCGCAGTTACTCTAGTGAAGCAGGGCTCAGATCTATTTGTGGGAAGTATCGGGGATTCTCGAGCGATTCTTGGATCTAAAGACAGCAGTGATTCCCTTGTAGCAACCCAGTTGACAGTAGATCTAAAGCCTGATTTACCCAGAGAAGCTGAAAGGATAAAGAAGTGTAAAGGAAGGGTATTTGCATTGCACGACGAGCCAGAAGTGCCAAGAGTGTGGCTGCCATTTGACAATGCACCTGGATTAGCAATGGCTCGAGCATTTGGCGACTTCTGTTTGAAGGACTATGGAGTTATCTCTATCCCTGAGTTCTCACACCGTGTGCTTACAAATAATGATTTGTTTGTTGTCCTTGCTTCAGATGGGGTTTGGGACGTATTGAGCAATGAAGAGGTGGTCGAGATAGTCTATTCTGCCTCAACTCGGTCATCGGCAGCCCGAATGGTGGTAGACTCAGCTGCTCGAGAGTGGAAACTCAAGTATCCTACTTCGAAAATGGATGACTGTGCTGTCGTCTGCCTATTCTTGGACGGGAAAGTGGATTCAGAATCAGAAAATGAAGAACAAGCTTCTTCTGCAACTCTTCAAACCAACCAAATGGGTCACACCGCAGAATCAGATGATGAGCAGCAGAGGTCTGAGCCAAGTTTGCAAAGGAATTATACGGTCCGATCGTCAGAAGAAAAAGACCAAATTGGAGGATTATCTTCTTCACATAATGAAGAGAATGGAGAACCAATATCTGCTGAAGATGATAATTGGTTGGGACTGGAGGGTGTAACAAGAGTAAACTCTTTGGTTCAACTCCCTAGATTTTCTTGA | 1413 | 43.81 | MGSCLSTGNQNSCRSGRNGERVSGSCLGIGVCGRIERKRTFSDHIFSLQHLNSVSNRLVYNGKTRNSCIFTQQGRKGINQDAMVVWEDFISDGAIFCGVFDGHGPHGHVVARKVRDVLPRKLVSFWQSSQLKHNRSDRTSCLPWSQKDSADGEGQNIDASEEDKSSSLWRTAFLKSYKAMDKELKSHPKLDCFCSGSTAVTLVKQGSDLFVGSIGDSRAILGSKDSSDSLVATQLTVDLKPDLPREAERIKKCKGRVFALHDEPEVPRVWLPFDNAPGLAMARAFGDFCLKDYGVISIPEFSHRVLTNNDLFVVLASDGVWDVLSNEEVVEIVYSASTRSSAARMVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKVDSESENEEQASSATLQTNQMGHTAESDDEQQRSEPSLQRNYTVRSSEEKDQIGGLSSSHNEENGEPISAEDDNWLGLEGVTRVNSLVQLPRFS | 470 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 31950483 | 31952384 | - | ClCG02G017450.1 | Cla02g01709 | 267835 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01709 | 470 | Gene3D | - | 53 | 375 | IPR036457 | - | |
Cla02g01709 | 470 | ProSiteProfiles | PPM-type phosphatase domain profile. | 66 | 373 | IPR001932 | - | |
Cla02g01709 | 470 | CDD | PP2Cc | 72 | 373 | IPR001932 | - | |
Cla02g01709 | 470 | SUPERFAMILY | PP2C-like | 61 | 375 | IPR036457 | - | |
Cla02g01709 | 470 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cla02g01709 | 470 | MobiDBLite | consensus disorder prediction | 384 | 401 | - | - | |
Cla02g01709 | 470 | MobiDBLite | consensus disorder prediction | 380 | 452 | - | - | |
Cla02g01709 | 470 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Cla02g01709 | 470 | SMART | PP2C_4 | 55 | 371 | IPR001932 | - | |
Cla02g01709 | 470 | PANTHER | PROTEIN PHOSPHATASE 2C 52-RELATED | 1 | 462 | - | - | |
Cla02g01709 | 470 | MobiDBLite | consensus disorder prediction | 412 | 440 | - | - | |
Cla02g01709 | 470 | Pfam | Protein phosphatase 2C | 156 | 350 | IPR001932 | - | |
Cla02g01709 | 470 | MobiDBLite | consensus disorder prediction | 137 | 153 | - | - | |
Cla02g01709 | 470 | MobiDBLite | consensus disorder prediction | 137 | 163 | - | - | |
Cla02g01709 | 470 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 462 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01709 | Cla-Chr2:31950483 | Cla11g00927 | Cla-Chr11:16035128 | 1.92E-141 | dispersed | |
Cla08g00451 | Cla-Chr8:13746133 | Cla02g01709 | Cla-Chr2:31950483 | 1.04E-135 | transposed | |
Cla03g01012 | Cla-Chr3:19168090 | Cla02g01709 | Cla-Chr2:31950483 | 7.02E-121 | transposed | |
Cla02g00118 | Cla-Chr2:1360519 | Cla02g01709 | Cla-Chr2:31950483 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01709 | - | - | cmax:111469610 | 813.527 |