Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01709 ATGGGGAGCTGTTTGTCTACTGGCAATCAGAATAGTTGCAGAAGTGGAAGGAATGGAGAGAGAGTTTCTGGATCCTGTTTGGGAATTGGAGTTTGTGGCCGGATTGAAAGAAAGAGAACATTCTCAGATCATATTTTTTCTCTGCAGCATTTGAATTCTGTTTCTAATAGACTCGTTTATAATGGGAAGACTCGAAATTCTTGTATTTTCACTCAGCAGGGTCGAAAGGGTATAAACCAAGACGCTATGGTTGTATGGGAAGACTTCATATCAGATGGTGCAATTTTCTGTGGGGTATTTGATGGCCACGGTCCTCATGGTCATGTCGTTGCACGAAAAGTTAGAGATGTTCTGCCGAGAAAGCTAGTGTCATTCTGGCAGTCATCTCAGTTGAAGCATAATAGATCAGATAGAACTTCTTGTCTCCCGTGGAGTCAGAAGGATTCAGCAGATGGTGAAGGACAGAACATAGATGCCTCAGAGGAGGATAAATCAAGTTCTTTATGGAGAACAGCTTTCCTCAAATCATATAAAGCCATGGATAAGGAGCTCAAGTCTCATCCCAAATTGGACTGTTTCTGTAGTGGCAGTACCGCAGTTACTCTAGTGAAGCAGGGCTCAGATCTATTTGTGGGAAGTATCGGGGATTCTCGAGCGATTCTTGGATCTAAAGACAGCAGTGATTCCCTTGTAGCAACCCAGTTGACAGTAGATCTAAAGCCTGATTTACCCAGAGAAGCTGAAAGGATAAAGAAGTGTAAAGGAAGGGTATTTGCATTGCACGACGAGCCAGAAGTGCCAAGAGTGTGGCTGCCATTTGACAATGCACCTGGATTAGCAATGGCTCGAGCATTTGGCGACTTCTGTTTGAAGGACTATGGAGTTATCTCTATCCCTGAGTTCTCACACCGTGTGCTTACAAATAATGATTTGTTTGTTGTCCTTGCTTCAGATGGGGTTTGGGACGTATTGAGCAATGAAGAGGTGGTCGAGATAGTCTATTCTGCCTCAACTCGGTCATCGGCAGCCCGAATGGTGGTAGACTCAGCTGCTCGAGAGTGGAAACTCAAGTATCCTACTTCGAAAATGGATGACTGTGCTGTCGTCTGCCTATTCTTGGACGGGAAAGTGGATTCAGAATCAGAAAATGAAGAACAAGCTTCTTCTGCAACTCTTCAAACCAACCAAATGGGTCACACCGCAGAATCAGATGATGAGCAGCAGAGGTCTGAGCCAAGTTTGCAAAGGAATTATACGGTCCGATCGTCAGAAGAAAAAGACCAAATTGGAGGATTATCTTCTTCACATAATGAAGAGAATGGAGAACCAATATCTGCTGAAGATGATAATTGGTTGGGACTGGAGGGTGTAACAAGAGTAAACTCTTTGGTTCAACTCCCTAGATTTTCTTGA 1413 43.81 MGSCLSTGNQNSCRSGRNGERVSGSCLGIGVCGRIERKRTFSDHIFSLQHLNSVSNRLVYNGKTRNSCIFTQQGRKGINQDAMVVWEDFISDGAIFCGVFDGHGPHGHVVARKVRDVLPRKLVSFWQSSQLKHNRSDRTSCLPWSQKDSADGEGQNIDASEEDKSSSLWRTAFLKSYKAMDKELKSHPKLDCFCSGSTAVTLVKQGSDLFVGSIGDSRAILGSKDSSDSLVATQLTVDLKPDLPREAERIKKCKGRVFALHDEPEVPRVWLPFDNAPGLAMARAFGDFCLKDYGVISIPEFSHRVLTNNDLFVVLASDGVWDVLSNEEVVEIVYSASTRSSAARMVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKVDSESENEEQASSATLQTNQMGHTAESDDEQQRSEPSLQRNYTVRSSEEKDQIGGLSSSHNEENGEPISAEDDNWLGLEGVTRVNSLVQLPRFS 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31950483 31952384 - ClCG02G017450.1 Cla02g01709 267835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01709 470 Gene3D - 53 375 IPR036457 -
Cla02g01709 470 ProSiteProfiles PPM-type phosphatase domain profile. 66 373 IPR001932 -
Cla02g01709 470 CDD PP2Cc 72 373 IPR001932 -
Cla02g01709 470 SUPERFAMILY PP2C-like 61 375 IPR036457 -
Cla02g01709 470 MobiDBLite consensus disorder prediction 1 20 - -
Cla02g01709 470 MobiDBLite consensus disorder prediction 384 401 - -
Cla02g01709 470 MobiDBLite consensus disorder prediction 380 452 - -
Cla02g01709 470 MobiDBLite consensus disorder prediction 1 19 - -
Cla02g01709 470 SMART PP2C_4 55 371 IPR001932 -
Cla02g01709 470 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 462 - -
Cla02g01709 470 MobiDBLite consensus disorder prediction 412 440 - -
Cla02g01709 470 Pfam Protein phosphatase 2C 156 350 IPR001932 -
Cla02g01709 470 MobiDBLite consensus disorder prediction 137 153 - -
Cla02g01709 470 MobiDBLite consensus disorder prediction 137 163 - -
Cla02g01709 470 PANTHER ALPHABET, ISOFORM E-RELATED 1 462 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01709 Cla-Chr2:31950483 Cla11g00927 Cla-Chr11:16035128 1.92E-141 dispersed
Cla08g00451 Cla-Chr8:13746133 Cla02g01709 Cla-Chr2:31950483 1.04E-135 transposed
Cla03g01012 Cla-Chr3:19168090 Cla02g01709 Cla-Chr2:31950483 7.02E-121 transposed
Cla02g00118 Cla-Chr2:1360519 Cla02g01709 Cla-Chr2:31950483 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01709 - - cmax:111469610 813.527