Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01732 ATGGGCTGCATCTGTTCTAAGGTTTTAGCTGACGAGTGTAGTGACAATGAACATGATACCTCCAAAAGAGCTCATTCCCCAATTAAACGCCTCTCTGAATTAAAAAAATCAAGATCTGGCTCTCCCACATCTGAGAAAATTTGGGAGAAAGATAGGCTGAATTGTAGTGATGTTACGGTTATGTTGTTCGATACAACGGCGAATGGTTCTCTACGCTCACACGGCAAGCTTTCTAATGAGAAGAAGAGCACAGACATCCCTGATGTCACCATTATCAACCATCCATTTATGGGAAAGATTCCGAAGGCTACTGAGGCCGAGCAAGTCGCTGCCGGGTGGCCGAGTTGGCTGGCTGTGGTGGCTGGTGAAGCTATCAAAGGCTGGTTGCCAAAACGTGCAAATAACTTCATCAAGTTAGAGAAAATTGGCCAAGGAACTTATAGCAGTGTGTATAAAGCTCGGGATATCATTCAAGATAAAGTTGTGGCCTTGAAAAGGATCAGATTTGACAATCAAGATGCTGAGAGTATCAAGTTTATGGCAAGGGAAATCCTTGTTTTGAGAAGGCTTGATCATCCAAATATAGTTAAGTTGGAAGGTTTGATCACATCACAAACATCATGTACTATGTACCTTGTTTTTGAATATATGGAACATGATCTTACCGGACTCGCATCACGGCCTGGCGCGTCGTTCACCGAACCACAGATGAAGTGTTACATGAAGCAACTTTTGAGTGGACTTGATCATTGTCACAGTAATGGGGTTCTTCATAGAGACATAAAGGGCTCAAATCTTCTTATTGACAACAATGGCATTTTGAAGATGGCAGATTTTGGGTTGGCTGTTTTCTTTGATTCTCATTCAACAGTTCCAATGACGAGCCGTGTAATAACTCTCTGGTATCGACCACCAGAACTTTTACTTGGAGCGTCTAAATATGGAGTTGAAGTTGATTTATGGAGTGCTGGCTGCATTCTAGGAGAGTTATATACTGGCAAGCCCATCTTACCAGGGAAAACAGAGGTTGAACAACTACATAAAATATTTAAGCTATGTGGTTCCCCTTCCAAGGACTATTGGAAAAAATTGCATTTGAAGCAATCAACAAGCATGAAACCTCCACAGTCATATGAAAGATGTCTTCGAGAAAGATATAACGATATTCCTCGTGCTGCTGTTGACCTCATGGACACTTTGTTATCTATAGATCCTACAGGGCGAGGAACTGCTGCTTCCGCACTCGACAGTGAGTTCTTTACAACAAGGCCCTTACCAAGCGATCCTTCAAATTTGCCAAAATACCCTCCAAGCAAAGAGATCGATTCAAAACTGCGTGAAGAGGAAGCAAGAAGGCAACAAGGAGTAGGTGGTGGGAGAAGCCAAATAGTCTACCAAGAAGCAAAAGGACTGAAGCAATCTAGAGTAGTTCCTGCTGCAAAGGCTAATGCTGAGTTGGTTATTTCATTACTGAGAAAACAAAGTCGTTCGAGCGCGAAGTACCGGAATGAAACGTATTCTTATGGTTTGGTGTCGAAAAGAACCTCAAATTCAGGACCTATAACTCAGGGACCGAGATTTACAAACAACAAAAAGGAACCAAAACATGTTTCTATGGTTTCCAGTGAGTGTTTAATATCATCTGGTCCTATTGAATTTGTTTCTTACAAATATGTCAGAGAAAGAAATGAAGTTTCAAAGCCAGAATCAATGAGCCAAGACAAAAATCTTCCTCTTCTATCCAGTTCTGCTGAAGAGTCATCCATCAAAAAGCTAAACGAAGACAAAGTTGATTCTGGAAGATTGGACTTTAGAAATTCGTTCCAGTGTTTTTTCTCAACGTCTGCGGTTTGTGGTTCAAAATCCCGTGTTTTGAAAGTCTTCTCTGAATTGGTTGGGTATATAGGAAGTTTCTGGGCTGCAAAAATGGGTTGTCAGTGTTCCAAGCCTTCTATTGATGAAGATGGCAAAAACAGAGCCTCTGAGAAATTTCCTTCACGAAAGGGTTCACGAGATAATTTATTAAAAAAAGGAGAGGATATGCGATTGAATTCTGTGAAAAGAGACGAAGATGTTCGAATAAATTCCTCACAGAGAGCAGATAGTATTCGATCAAAGGTGAAAACGGATGGTGTTGACATGAAACTTGCTTATTTGGACAAGAGAGTCAACGGCTCTAACAGGGTACACGATGATCAAATTGAAAAAAAGAAGAGGGAGAGGTTGGGAGCTGCCATTTCTGCTAATTATCCTGGAAAAGGAAGCATTCCAAAGGCTATGGAAGCGGAGCAAGTTGCAGCTGGTTGGCCAAGCTGGCTCTCCTCTGTGGCCGGTGAAGCGCTCGAGGGATGGCTGCCACGGAGAGCCGAAACTTTTGAGAAACTTGACAAGATAGGACAAGGCACATATAGTAGTGTTTACAAGGCTCGTGATATCATTCAAAATAAACTAGTCGCTCTAAAACGAGTTCGATTCGATAATCTCGATGTGGAGAGTGTCAAGTTTATGGCCCGGGAAATCCTTATCCTGCGTAGGCTTGATCATCCAAATGTTATAAAATTGGAAGGCTTGATTACATCACCGCGATCATGTAGCTTGTACCTCATTTTTGAGTATATGGAGCATGACCTTACAGGCCTTGCATCTCGGCCTGGGGTCAAGTTCAGCGAACCACAGGTTAAATGCTATATGCAACAACTTCTAAGGGGGCTTGATTATTGCCACAGTCGTGGTGTCCTCCACCGCGATATAAAGGGTTCAAATCTCCTAATTGACGACAATGGCATCTTGAAGATTGCAGATTTTGGATTAGCAAGCCCTTTTGACCCCCATAATCAAGTTCCCTTAACAAGCCGTGTAGTGACTCTATGGTACCGACCACCTGAACTTCTGCTTGGAGCTTCTTATTATGGGGTTGCAGTGGACCTGTGGAGTACGGGTTGCATACTAGCGGAGCTATATTCTGGGAAGCCTATCTTACCTGGAAAAACTGAGGTCGAACAGTTGCACAAGATATTTAAACTTTGTGGGTCGCCGCCTGAGAATTATTGGAAGAAATTGCAATTACCTCATTCAACTGGATTTAAGACGGCTCAGCCATACCGACGTTGTATCGGGGGAATGCTCAAGGATTTCCCACCATCTGCGGTGGCTCTTGTGGATAAGTTGCTTTCTATAGATCCTGCTCATCGAGGAACAGCAGCTGCTGCTCTAAAGAGCGAGTTTTTTACGACTAAACCTCTTGCTTGCGAGCCTACGAGTCTGCCCAAATATCCTCCCAGCAAAGAGATTGATGCAAAATTCCCTGGCTGCAGAAGGCAGTCAAGAGCTGAGGGCAAAGACCCTAAAGATTATGTGGAAGGGAGGCGACCTAAAGAAGCTCACATTAATCTTTCTCTGAATGCTAAGGATGAAGTAAACATGTCAATGCAGAAAAGGCAAGGTTATTCAAGTTTTAAGGGCCGGGGCGGAGTGTTGAATCCGCATGGGGATGAGACAGTTTCTGGGTTTTTGATTCCTCCGCCCAAACAAAATCAATCTGTCACAGAAATTTGCTCAGATACAGGCCGGATTTCGCATTCAGGACCGCTAATTAGCAAACCAGATTGGATGAAATCTAGGAAGCAACTCGATGACCATTCGATGGCGCTTGATGGATCCAATCTCTCAGTATTATCCCGTTTAGTAGCAACGAGGTCTAATATATCTGATCATCCCTATGATAGACCGGGTCCATCACAATCAGAAGTAGGCAGATTGCCTGACTTCGTCAGGGATTCAGAGTCAACGAGAAAGCAGGACCGAATATTTTATACACACCGAGTTGCGGATTCATATCGAATAGAGAACGAAAAAGTTTGTGCTAAAGAACAGTCCCTGCTTGCTTATGGGACAGACATGAACAAGCTTTATACTTCTGGTCCAATCCTTGGTCCATCAAACAACTTAGATAAAATTCTGAAAGAGCGAGACCGTCAGATTCAAGAATACGCTCGACAAGCACGACACGGTAAAGCTGCTAACAGTCAGTTAAAGAATTCAAGAGCAACAACTGGAAAACATCTGATGTCGAGCCATGGAATGTGA 4086 43.07 MGCICSKVLADECSDNEHDTSKRAHSPIKRLSELKKSRSGSPTSEKIWEKDRLNCSDVTVMLFDTTANGSLRSHGKLSNEKKSTDIPDVTIINHPFMGKIPKATEAEQVAAGWPSWLAVVAGEAIKGWLPKRANNFIKLEKIGQGTYSSVYKARDIIQDKVVALKRIRFDNQDAESIKFMAREILVLRRLDHPNIVKLEGLITSQTSCTMYLVFEYMEHDLTGLASRPGASFTEPQMKCYMKQLLSGLDHCHSNGVLHRDIKGSNLLIDNNGILKMADFGLAVFFDSHSTVPMTSRVITLWYRPPELLLGASKYGVEVDLWSAGCILGELYTGKPILPGKTEVEQLHKIFKLCGSPSKDYWKKLHLKQSTSMKPPQSYERCLRERYNDIPRAAVDLMDTLLSIDPTGRGTAASALDSEFFTTRPLPSDPSNLPKYPPSKEIDSKLREEEARRQQGVGGGRSQIVYQEAKGLKQSRVVPAAKANAELVISLLRKQSRSSAKYRNETYSYGLVSKRTSNSGPITQGPRFTNNKKEPKHVSMVSSECLISSGPIEFVSYKYVRERNEVSKPESMSQDKNLPLLSSSAEESSIKKLNEDKVDSGRLDFRNSFQCFFSTSAVCGSKSRVLKVFSELVGYIGSFWAAKMGCQCSKPSIDEDGKNRASEKFPSRKGSRDNLLKKGEDMRLNSVKRDEDVRINSSQRADSIRSKVKTDGVDMKLAYLDKRVNGSNRVHDDQIEKKKRERLGAAISANYPGKGSIPKAMEAEQVAAGWPSWLSSVAGEALEGWLPRRAETFEKLDKIGQGTYSSVYKARDIIQNKLVALKRVRFDNLDVESVKFMAREILILRRLDHPNVIKLEGLITSPRSCSLYLIFEYMEHDLTGLASRPGVKFSEPQVKCYMQQLLRGLDYCHSRGVLHRDIKGSNLLIDDNGILKIADFGLASPFDPHNQVPLTSRVVTLWYRPPELLLGASYYGVAVDLWSTGCILAELYSGKPILPGKTEVEQLHKIFKLCGSPPENYWKKLQLPHSTGFKTAQPYRRCIGGMLKDFPPSAVALVDKLLSIDPAHRGTAAAALKSEFFTTKPLACEPTSLPKYPPSKEIDAKFPGCRRQSRAEGKDPKDYVEGRRPKEAHINLSLNAKDEVNMSMQKRQGYSSFKGRGGVLNPHGDETVSGFLIPPPKQNQSVTEICSDTGRISHSGPLISKPDWMKSRKQLDDHSMALDGSNLSVLSRLVATRSNISDHPYDRPGPSQSEVGRLPDFVRDSESTRKQDRIFYTHRVADSYRIENEKVCAKEQSLLAYGTDMNKLYTSGPILGPSNNLDKILKERDRQIQEYARQARHGKAANSQLKNSRATTGKHLMSSHGM 1361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32202471 32216149 + ClCG02G017680.1 Cla02g01732 267858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01732 1361 CDD STKc_CDK9_like 136 420 - -
Cla02g01732 1361 SUPERFAMILY Protein kinase-like (PK-like) 131 427 IPR011009 -
Cla02g01732 1361 ProSiteProfiles Protein kinase domain profile. 136 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01732 1361 MobiDBLite consensus disorder prediction 1339 1361 - -
Cla02g01732 1361 ProSitePatterns Protein kinases ATP-binding region signature. 798 821 IPR017441 GO:0005524
Cla02g01732 1361 SUPERFAMILY Protein kinase-like (PK-like) 787 1081 IPR011009 -
Cla02g01732 1361 MobiDBLite consensus disorder prediction 651 679 - -
Cla02g01732 1361 CDD STKc_CDK9_like 792 1076 - -
Cla02g01732 1361 SMART serkin_6 136 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01732 1361 SMART serkin_6 792 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01732 1361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 912 924 IPR008271 GO:0004672|GO:0006468
Cla02g01732 1361 MobiDBLite consensus disorder prediction 1094 1121 - -
Cla02g01732 1361 MobiDBLite consensus disorder prediction 1335 1361 - -
Cla02g01732 1361 MobiDBLite consensus disorder prediction 439 454 - -
Cla02g01732 1361 ProSiteProfiles Protein kinase domain profile. 792 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01732 1361 ProSitePatterns Protein kinases ATP-binding region signature. 142 165 IPR017441 GO:0005524
Cla02g01732 1361 MobiDBLite consensus disorder prediction 652 679 - -
Cla02g01732 1361 Pfam Protein kinase domain 137 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01732 1361 Pfam Protein kinase domain 792 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01732 1361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Cla02g01732 1361 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 729 1329 - -
Cla02g01732 1361 Gene3D Transferase(Phosphotransferase) domain 1 219 458 - -
Cla02g01732 1361 Gene3D Transferase(Phosphotransferase) domain 1 875 1113 - -
Cla02g01732 1361 PANTHER CELL DIVISION PROTEIN KINASE 729 1329 - -
Cla02g01732 1361 PANTHER CELL DIVISION PROTEIN KINASE 79 568 - -
Cla02g01732 1361 MobiDBLite consensus disorder prediction 1099 1121 - -
Cla02g01732 1361 MobiDBLite consensus disorder prediction 420 458 - -
Cla02g01732 1361 MobiDBLite consensus disorder prediction 1235 1263 - -
Cla02g01732 1361 Gene3D Phosphorylase Kinase; domain 1 123 218 - -
Cla02g01732 1361 Gene3D Phosphorylase Kinase; domain 1 779 874 - -
Cla02g01732 1361 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 79 568 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01732 Cla-Chr2:32202471 Cla05g01008 Cla-Chr5:10158398 0 dispersed
Cla02g01732 Cla-Chr2:32202471 Cla03g01582 Cla-Chr3:31590266 1.24E-163 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80360 PF00069 Pkinase 5.50E-67 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01732 - - csv:101207826 1348.57