Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01771 ATGCGAAAATTTAATTCCGTGTGTCAGAGCAAGAAAGAGAAGAGCTGGAAGGGCAGAAGACATCGAATATCCGTCTTGATCCTGAAGCCTTTCTCCTTCCTTCTTTATCTCTTCCCTATAAAGCCGCAGTTTCTGCAGTCACACTTCTTTCCAAGATCATCATCATCATCATCATCATCATCTGCTTCTTCATCGTCGTCGTCATCTTCATCTTCTTCTTCCTCTTCTTCTTCCTCTTCTTCTTCAGCTGTAATGAAATTCGAAGAGCAGAACCTGAAGCATCAATCTGAACAGATGTGCAGGACTATTGAGGTGGATACAATTGATCACCATCGCAGTATTTCGTCGCTACTCGTAATGGAAGCTTCCGAAGACTGCGACAGGGACGGTGACGGCCTCTATATTCCTCCTCTCAACTTTTCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCCGACTCTCCTAACTTCTCCTTCCTCCAAACCCTAGGTCTCCGTTCCATTATATGTTTATGTCCGGAGCCGTATCCGGAACACAACATGGAGTTCCTCAAGTCGAACGGGATTAGATTGTTTCAATTTGGAATCGAAAGCAATAAGGAGCCTTTCGTGAACATCCCAGATGATATGATTCGTGAAGCACTGAAAGTTGTCCTTGACGATAGAAATCATCCGGTTCTCATACATTGCAAAAGAGGAAAGCATCGGACAGGTTGTCTTGTGGGATGCCTGAGAAAAGTGCAGAGGTGGTGCCTCACTTCTGTGTTTGATGAGTACCAAAGGTTTGCAGCTGCAAAAGCAAGAATTTCAGACCAGAGGTTCATGGAGTTGTTTGATATCTCTGGCTTGAAGCATCTTCCCATGTCATTCTCATGCTCAAAGAGGTGA 891 44.78 MRKFNSVCQSKKEKSWKGRRHRISVLILKPFSFLLYLFPIKPQFLQSHFFPRSSSSSSSSSASSSSSSSSSSSSSSSSSSSSAVMKFEEQNLKHQSEQMCRTIEVDTIDHHRSISSLLVMEASEDCDRDGDGLYIPPLNFSMVDNGIFRSGFPDSPNFSFLQTLGLRSIICLCPEPYPEHNMEFLKSNGIRLFQFGIESNKEPFVNIPDDMIREALKVVLDDRNHPVLIHCKRGKHRTGCLVGCLRKVQRWCLTSVFDEYQRFAAAKARISDQRFMELFDISGLKHLPMSFSCSKR 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32683792 32688392 - ClCG02G018090.2 Cla02g01771 267897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01771 296 Pfam Tyrosine phosphatase family 134 284 IPR004861 -
Cla02g01771 296 PANTHER - 97 295 - -
Cla02g01771 296 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 202 242 IPR000387 GO:0016311|GO:0016791
Cla02g01771 296 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 135 281 IPR029021 -
Cla02g01771 296 MobiDBLite consensus disorder prediction 56 80 - -
Cla02g01771 296 Gene3D Protein tyrosine phosphatase superfamily 134 283 IPR029021 -
Cla02g01771 296 ProSiteProfiles Dual specificity protein phosphatase domain profile. 139 293 IPR020422 GO:0006470|GO:0008138
Cla02g01771 296 CDD PFA-DSP_Siw14 133 280 - -
Cla02g01771 296 PANTHER TYROSINE-PROTEIN PHOSPHATASE 97 295 - -
Cla02g01771 296 ProSitePatterns Tyrosine specific protein phosphatases active site. 229 239 IPR016130 GO:0016311|GO:0016791
Cla02g01771 296 PRINTS Plant and fungal dual specificity phosphatase signature 190 204 IPR020428 GO:0016791
Cla02g01771 296 PRINTS Plant and fungal dual specificity phosphatase signature 207 221 IPR020428 GO:0016791
Cla02g01771 296 PRINTS Plant and fungal dual specificity phosphatase signature 134 151 IPR020428 GO:0016791
Cla02g01771 296 PRINTS Plant and fungal dual specificity phosphatase signature 171 184 IPR020428 GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01026 Cla-Chr3:19567511 Cla02g01771 Cla-Chr2:32683792 7.78E-76 transposed
Cla02g01771 Cla-Chr2:32683792 Cla09g01043 Cla-Chr9:11085324 2.20E-104 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01771 K18045 - csv:101222170 395.586