Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01793 | ATGGCTCCAATGCTCGTACAAAATGCTCGTGAAGTTCCGGAATACGAGATCAATCCAAATGAGCTTGATTTTTCTAAGAGTGTGAACATTACAAAAGGAACTTTCCGCAGTGCTTCATGGCGTGGAATTCAAGTTGCTGTGAAGACACTAGGCGAGGAAGTTTTCACCGACGAGGATAAAGTGAAGGCATTTAGGGATGAACTTGCTTTACTTCAGAAGATACGGCATCCTAATGTTGTCCAATTTCTGGGAGCTGTAACACAAAGTAGTCCAATGATGATTGTCACAGAGTATTTGCCCCAGGGGGACCTTCATGCATTCTTGAAACGTAAAGGTTCCTTGAAGCTAGCAACAGTCGTAAAGTTTGCTCTTGACATTGCAAGGGGAATGAATTATTTGCATGAGCATAAACCTGAAGCAATAATCCATCGCGATCTTGAACCTTCAAACATACTGCGGGATGATTCTGGGCACCTGAAAGTCGCAGACTTTGGAGTTAGCAAACTTCTAAAATTTTCGAATAGGGTTAAAGAAGACAGACCTGTGGCTGTGACATGTCAGGACACTTCATGGCGATATGCGGCACCTGAGGTTTATAAAAATGAAGAATATGATACAAAAGTGGATGTATTTTCATTTTCTTTGATCTTGCAAGAGATGATAGAAGGCAATCCACCTTTTCCAACAATGCCAGAAAATGAAGTAGCCAAAGCTTATATAGCTAACGAACGCCCCCCATTTACGGCTCCACCAAAGCATTATGCACTCGGAATACAGGAGCTCATTCAGGAATGTTGGGATGAGAACCCGCATAAAAGACCCACGTTTCGGCAAATAATAAGAAGCATCCACAGACGAGAAATATCCTTCATCTTTATAGTTGATATAATAATGATGCCACAAAAAGACCTGATAAACTTGCAAATCAGGATTATGAAAGCATTGTGTACGAGATGGCATGATTTAGCGACCATTAACAATGATGTAAAACCAAATCCAGGTAGTCCGTATATGAAACAATTCAAGTACTTTGATTCCTTTCTTCATAAAGTTGTTAAAACAAGCATCTTTTATATCCCAATCGCAAACCCTAGGTGGCGCAAAAGGAAATGCTTCATTGATACCGCATATTCGGCGTCGCCATCACTTCCCACCACCTCTTATCCCTCCTCTCCCGCACTCTGTTTCGCTTCTTGTACTACTCTTTTGTGGAGGCTCAAGGGACAGTCTCTTCCTTTGCTCTCCCTTCATCGTCTCCCTGTTTCTTCTTTCCCTGTTACATATGCTTTTTTTCGGCAGTTAATAATCTCTAATTCTTGGACATCGGGAAGTTTGAAGACTTGTCAAGATGGTCAGTATGCTCTTCTCTTGACGATGTTAATTTTGCGATCTGGAAAGTACTTTTTCACTTTAATAATCATCTTTAATCTTTTCTGTGTTCAGGTGAAGTTTACAGCCGAGGAGCTTCGTAGGATTATGGACTTTAAGCATAACATTCGTAATATGTCTGTTATTGCTCACGTCGATCATGGAAAGTCGACACTTACAGACTCTCTTGTGGCTGCTGCGGGTATCATTGCACAAGAAGTTGCCGGTGATGTACGAATGACAGACACTCGCCAAGATGAGGCAGAGCGTGGTATCACCATTAAATCTACTGGAATCTCCCTCTACTATGAGATGTCTGATGAATCCTTGAAAAGTTACAAGGGAGAGAGACAGGGAAATGAATATCTTATCAATCTTATTGATTCACCCGGGCACGTTGACTTCTCATCTGAGGTTACAGCTGCTTTGCGTATTACCGATGGTGCCCTTGTTGTGGTGGATTGTGTCGAAGGTGTTTGTGTCCAAACAGAGACCGTGCTCCGTCAGGCTTTGGGAGAGAGGATTAGACCTGTCTTGACTGTTAACAAGATGGACAGGTGCTTCCTTGAACTCCAAGTGGATGGAGAAGAGGCTTATCAAACATTTCAGAGGGTGATAGAGAATGCCAATGTGATTATGGCCACATACGAGGATCCACTTCTTGGGGATGTTCAAGTGTACCCCGAGAAAGGAACAGTCGCTTTCTCTGCTGGTCTGCACGGTTGGGCGTTTACCCTGACTAACTTTGCGAAGATGTATGCCTCCAAGTTTGGAGTAGACGAGTCAAAGATGATGGAGAGACTTTGGGGTGAGAACTTCTTTGATCCTGCAACCAAGAAGTGGACGAGCAAGAACACTGGCTCTCCAACATGCAAGCGTGGGTTTGTCCAGTTCTGCTACGAACCCATCAAGCAGATCATTGCAACTTGCATGAACGATCAGAAGGACAAGCTATGGCCCATGTTGCAGAAGCTTGGAGTTGTGATGAAGTCTGAAGAGAAGGATCTGATGAGTAAAGCATTGATGAAGAGGGTCATGCAAACATGGCTCCCAGCAAGCAATGCTCTTTTGGAAATGATGATCTTTCATCTTCCATCCCCTGCCACGGCTCAAAAGTACCGTGTTGAGAATTTGTACGAGGGTCCACTAGATGATGCTTATGCGAGTGCCATTAGAAGTTGTGATCCTGAAGGACCTCTTATGCTTTATGTATCGAAGATGATTCCTGCATCAGACAAGGGCAGGTTCTTTGCCTTTGGACGTGTCTTCTCTGGGAAAGTTTCAACTGGTTTGAAAGTTAGAATTATGGGACCAAACTATGTTCCCGGCGAGAAGAAAGATTTGTATGTGAAGAGTGTCCAGAGAACTGTCATTTGGATGGGAAAGAAGCAAGAAACGGTGGAGGATGTGCCGTGTGGTAACACTGTTGCCATGGTTGGATTGGATCAATTCATCACAAAGAATGCTACTCTGACAAACGAGAAGGAAGTTGATGCCCATCCAATTCGAGCCATGAAATTTTCTGTATCGCCTGTGGTGCGTGTGGCTGTTCAGTGCAAGGTGGCATCTGATCTTCCCAAGCTCGTGGAAGGGCTTAAACGTCTGGCGAAGTCAGATCCTATGGTTGTATGTACAATGGAGGAATCTGGTGAGCACATTGTTGCCGGTGCTGGAGAACTGCATCTTGAGATCTGTCTGAAGGATTTGCAAGATGACTTCATGGGTGGAGCTGAGATCATAAAATCTGACCCTGTTGTCTCTTTCCGTGAAACTGTCCTTGAGAGGTCATGCCGCACGGTGATGAGTAAATCCCCCAACAAACACAATCGTCTATACATGGAAGCACGACCGATGGAGGAAGGACTGGCAGAAGCTATTGACGATGGCCGCATCGGACCACGGGATGACCCTAAAGTTAGGTCTAAAATCTTGTCAGAGGAGTTTGGTTGGGACAAAGATCTTGCTAAGAAGATTTGGTGCTTTGGTCCTGAGACTACCGGCCCTAACATGGTGGTTGATATGTGTAAGGGAGTTCAATACCTAAATGAAATCAAGGATTCCGTTGTCGCCGGTTTCCAGTGGGCGTCGAAAGAAGGTGCATTGGCTGAAGAAAACATGAGAGGCATCTGTTTTGAAGTTTGTGATGTGGTGCTTCACGCTGATGCCATCCACAGAGGAGGTGGTCAAGTCATTCCGACCGCTAGGAGGGTAATTTACGCTTCTCAGCTGACCGCCAAACCAAGACTTCTTGAGCCTGTGTACCTAGTGGAGATTCAGGCTCCTGAGCAAGCTCTTGGTGGTATCTACAGTGTTCTTAACCAGAAGCGTGGGCACGTCTTTGAGGAAATGCAGAGGCCCGGTACCCCTCTTTACAACATCAAGGCGTATCTCCCTGTCATTGAGTCTTTCGGGTTCTCGAGCACATTGAGAGCTGCAACTTCCGGGCAGGCGTTCCCACAGTGTGTTTTCGACCATTGGGACATGATGTCGTCGGATCCATTGGAACCTGGTTCCCAGGCTGCACAGTTAGTTGCAGATATCCGCAAGAGGAAGGGATTGAAGGAACAAATGACCCCACTTTCCGAGTTCGAGGACAAGCTGTAG | 3972 | 45.14 | MAPMLVQNAREVPEYEINPNELDFSKSVNITKGTFRSASWRGIQVAVKTLGEEVFTDEDKVKAFRDELALLQKIRHPNVVQFLGAVTQSSPMMIVTEYLPQGDLHAFLKRKGSLKLATVVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKFSNRVKEDRPVAVTCQDTSWRYAAPEVYKNEEYDTKVDVFSFSLILQEMIEGNPPFPTMPENEVAKAYIANERPPFTAPPKHYALGIQELIQECWDENPHKRPTFRQIIRSIHRREISFIFIVDIIMMPQKDLINLQIRIMKALCTRWHDLATINNDVKPNPGSPYMKQFKYFDSFLHKVVKTSIFYIPIANPRWRKRKCFIDTAYSASPSLPTTSYPSSPALCFASCTTLLWRLKGQSLPLLSLHRLPVSSFPVTYAFFRQLIISNSWTSGSLKTCQDGQYALLLTMLILRSGKYFFTLIIIFNLFCVQVKFTAEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKSYKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTSKNTGSPTCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLQKLGVVMKSEEKDLMSKALMKRVMQTWLPASNALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYASAIRSCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTMEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLEPGSQAAQLVADIRKRKGLKEQMTPLSEFEDKL | 1323 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 32950219 | 32963999 | + | ClCG02G018315.1 | Cla02g01793 | 267919 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01793 | 1323 | Pfam | Elongation factor G, domain IV | 1091 | 1202 | IPR005517 | GO:0005525 | |
Cla02g01793 | 1323 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 497 | 824 | IPR000795 | GO:0003924|GO:0005525 | |
Cla02g01793 | 1323 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 482 | 1322 | - | - | |
Cla02g01793 | 1323 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 538 | 553 | IPR031157 | - | |
Cla02g01793 | 1323 | Pfam | Elongation factor Tu GTP binding domain | 497 | 822 | IPR000795 | GO:0003924|GO:0005525 | |
Cla02g01793 | 1323 | SUPERFAMILY | Protein kinase-like (PK-like) | 41 | 303 | IPR011009 | - | |
Cla02g01793 | 1323 | CDD | eEF2_snRNP_like_C | 1207 | 1285 | - | - | |
Cla02g01793 | 1323 | Gene3D | Transferase(Phosphotransferase) domain 1 | 7 | 293 | - | - | |
Cla02g01793 | 1323 | TIGRFAM | small_GTP: small GTP-binding protein domain | 500 | 656 | IPR005225 | GO:0005525 | |
Cla02g01793 | 1323 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 484 | 821 | IPR027417 | - | |
Cla02g01793 | 1323 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 1042 | 1206 | IPR020568 | - | |
Cla02g01793 | 1323 | CDD | STKc_MAP3K-like | 30 | 283 | - | - | |
Cla02g01793 | 1323 | SUPERFAMILY | EF-G C-terminal domain-like | 1207 | 1318 | IPR035647 | - | |
Cla02g01793 | 1323 | ProSiteProfiles | Protein kinase domain profile. | 1 | 291 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01793 | 1323 | Gene3D | - | 1203 | 1323 | - | - | |
Cla02g01793 | 1323 | CDD | EF2_II | 855 | 950 | - | - | |
Cla02g01793 | 1323 | Gene3D | - | 1050 | 1202 | IPR014721 | - | |
Cla02g01793 | 1323 | SMART | EFG_IV_2 | 1086 | 1202 | IPR005517 | GO:0005525 | |
Cla02g01793 | 1323 | Pfam | Protein tyrosine and serine/threonine kinase | 29 | 282 | IPR001245 | GO:0004672|GO:0006468 | |
Cla02g01793 | 1323 | CDD | aeEF2_snRNP_like_IV | 1039 | 1211 | - | - | |
Cla02g01793 | 1323 | Pfam | Elongation factor Tu domain 2 | 874 | 947 | IPR004161 | GO:0005525 | |
Cla02g01793 | 1323 | PANTHER | - | 482 | 1322 | - | - | |
Cla02g01793 | 1323 | SUPERFAMILY | Translation proteins | 822 | 956 | IPR009000 | - | |
Cla02g01793 | 1323 | SUPERFAMILY | EF-G C-terminal domain-like | 964 | 1040 | IPR035647 | - | |
Cla02g01793 | 1323 | CDD | EF2 | 500 | 710 | - | - | |
Cla02g01793 | 1323 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 966 | 1043 | - | - | |
Cla02g01793 | 1323 | Gene3D | Translation factors | 823 | 964 | - | - | |
Cla02g01793 | 1323 | Pfam | Elongation factor G C-terminus | 1204 | 1290 | IPR000640 | - | |
Cla02g01793 | 1323 | CDD | EF2_snRNP_III | 967 | 1039 | - | - | |
Cla02g01793 | 1323 | Pfam | Elongation Factor G, domain III | 967 | 1029 | IPR041095 | - | |
Cla02g01793 | 1323 | SMART | EFG_C_a | 1204 | 1293 | IPR000640 | - | |
Cla02g01793 | 1323 | Gene3D | - | 483 | 717 | IPR027417 | - | |
Cla02g01793 | 1323 | PRINTS | GTP-binding elongation factor signature | 581 | 591 | IPR000795 | GO:0003924|GO:0005525 | |
Cla02g01793 | 1323 | PRINTS | GTP-binding elongation factor signature | 633 | 642 | IPR000795 | GO:0003924|GO:0005525 | |
Cla02g01793 | 1323 | PRINTS | GTP-binding elongation factor signature | 501 | 514 | IPR000795 | GO:0003924|GO:0005525 | |
Cla02g01793 | 1323 | PRINTS | GTP-binding elongation factor signature | 545 | 553 | IPR000795 | GO:0003924|GO:0005525 | |
Cla02g01793 | 1323 | PRINTS | GTP-binding elongation factor signature | 597 | 608 | IPR000795 | GO:0003924|GO:0005525 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g02349 | Cla-Chr1:37242729 | Cla02g01793 | Cla-Chr2:32950219 | 9.01E-139 | dispersed | |
Cla02g01793 | Cla-Chr2:32950219 | Cla02g01810 | Cla-Chr2:33134579 | 0 | dispersed | |
Cla10g01587 | Cla-Chr10:31345273 | Cla02g01793 | Cla-Chr2:32950219 | 5.59E-22 | dispersed | |
Cla02g01791 | Cla-Chr2:32932713 | Cla02g01793 | Cla-Chr2:32950219 | 0 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80363 | PF00009 | GTP_EFTU | 5.80E-66 | CL0023 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01793 | K03234 | - | tcc:18594569 | 1651.34 |