Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01800 ATGGATGGTAATTTTGGGAGGTTTATTGGGTTTTGGTTTGATGGAGGATTGGGGAAGGTTCATGGAAAAGTGGGCTTCTGCACTTGTGATCCGAAATTTGCACTTCCGCCCCCCATTTTGCCCAGAATGCAGCCAGATCAAGCCAAAAAGAATTCAACCGAAGTGGAGTTCTTTTCTGATTATGGAGATGCGAGTAGATACAAAATTCAGGAAGTAATCGGGAAAGGAAGCTATGGGGTTGTCTGTTCCGCAATTGACACCCGCACCGGCGACAAGGTTGCAATAAAGAAGATACATAATATTTTTGAGCATATATCTGACGCGGTTAGAATTCTTCGTGAGATAAAGCTGCTTAGACTTCTTCGCCATCCTGATATTGTTGAAATTAAACACATTATGCTGCCACCTTCAAGGAGGGATTTCAAAGATATCTATGTTGTTTTCGAGCTCATGGAATCAGATCTCCACCAAGTTATTAAAGCAAATGATGATCTGACTCGAGAACATTATCAGTTTTTCCTTTACCAACTTCTTCGTGCATTAAAATATATCCATACAGCGAATGTCTACCATCGTGATTTAAAACCAAAGAATATATTAGCAAATGCAAATTGTAAACTTAAAATTTGTGATTTTGGATTAGCAAGAGTTGCCTTCAGTGACACACCAACAACAATTTTCTGGACGGATTATGTTGCTACTAGATGGTACCGAGCTCCAGAGCTGTGTGGTTCATTTTTCTCGAAGTATACACCTGCAATTGATATATGGAGTATTGGCTGCATATTTGCTGAAGTATTAATGGGGAAGCCACTTTTTCCTGGTAAAAACGTTGTCCACCAGCTTGATTTGATGACAGATCTCCTTGGAACTCCTTCATTAGATACAATCTCCAGGGTACGTAATGACAAGGCTAGAAGATATTTAACTACTATGAGGAAAAAGCAGCCGGTACCATTTTCTCAAAAGTTCCCAAATGCAGATCCATTAGCGCTGAGGCTACTAGAAAGACTGCTTGCTTTTGATCCAAAAGATAGACCAACTGCTGAAGAGGCACTGGCTGATCCATACTTCAAGGGATTGGCAAAAATTGAGAGGGAACCTTCCTGCCAGCCAATCACAAAGATGGAATTTGAATTTGAGAGACGGAGGGTCACAAAAGAAGACATTCAAGAGCTAATCTTCCGGGAGATACTAGAATATCATCCTCAGCTACTAAAAGACTACATGAATGGGACGGAGAGAACGAATTTTCTATATCCAAGTGCTGTTGACCAATTTAGAAAGCAGTTTGCGCATCTGGAGGAAAATGGTGGTAAAAGTGCGCCAGTTATTCCTCTTGACAGAAAGCATGTGTCCCTTCCAAGGTCAACAGTTGTACATTCGAACCCGGTCTATTCTAAGGACCAAGTAAATAATGTAACTCTCCAAGATGGGAAGATCTCTGAAGAGGCATACGGCAAGAATTCCCGAGATAGTGAAGGACGGCTAACAAATATATCGAGGGCCATGCAGGCACCACAAAAAATCCCATTTGCTAAGCCTGGAAGAGTGGTTGGACCGGTTATAGCAGATGAGAATGGGAGGCTGGTGAAGGAACCATACGATCCAAGAACGTTGATCCGAGGTGCCATTCTTCCTCCTGCATATCACTACCACCAAAAACCCGTTGCTGGAAATCAAGAAAGATCTGCAGCAGAAACTAAACTTGATATTTCTTTAAGGGCCGCTAAGCAAGCATCCCAGTGTGGCATGGCTTCCAAATTAGGATCAGATATTGCCATCAGCATTGACTCGAACCCCTTTTACATGACACGTGCCGGAGTGAACAAGGTCGAACTCAAGGACCAAATATCCATCGATGCAAACTTTCTTCAGGCCAAGGCCGCCCAATACGGTGGTCTTAGTGCAGCAACAGCCACCGCCACATCGGTTGCTCACAGAAAGATTATAAAAGCCATGGATGAAACAAGAACTCAGAGGAAGGATATGGCCGTCGGCTCGGCTGCTATATGTTGTAATAGATGGGCGAGAGAGAGCAATAAGAAATTATCTCATTCTAGTAACTTTGTTGAATGTCTGCATCAGCAAGCCGCTGAACCGGAGAAATCAAAAGGAATATTAATGGAGAACGAGATTAATATTGTAAATGACGGGGCATCGGGGGACGATCAGACCACAGAGGATTTTTTTGATGTTGACCAGCGGGAGAACGATGCAAAGGTCGCGGAGCTGAACCATAGAATTGAGGTTTTGGAGCGTGAAAAGAAAAAATTGGTTGATGAAAATGAAGAAATCAAAGATAAGATTAAAAGGTTGTCAGCGGAGATTGAAGGGTTGAAGAGTGAAGAGGGGAGGCTGATAGAACAACTGAAAGAAATGGAGAAACAAGTTGAACGTTCTGAAGAGGGAAATAAGGTGGTAGAGTCGGTTGCGGCAAGGGCACTGGAGCTTGAGACTGAAGTCTCGAGGCTACAGCATGATTTGATATCTGCAATGAATGGAGCTGATGAGGCGAATGCTGAAGTTGCGGAGTTGAGGAAAAATTTGGGGGAAAAGGGAGTGAAGGTTGCAGCTCTGGAGGAAGAGTTGGAAGCCCTGAAGAAAGCAAAGGCAGAGAGTGAAAAGAAAGTCAGAGAATTGGAGAGGAAAGTTGGGGTTTTGGAGGTCAAGGAGATAGAGGAGAAGAGTAAAAAAGTTAGGGTAGAGGAGGAAATGAGAGACAAAATTGAGGAGAAAGAGAGGGAAATCACCAGTTTCAAAAAGACTATTGAGAATTTGGAATTGGTGGTAACAAAGAACGGCCTGGAATTAGATAAGTGGATCAAGGAGAAACTTAAGGTGGAAGAGTTGTTGAAGGAGTCAGAGGAGAAAACGAAAATGTTTGAGTCGAAAATGGCTCAGTTGCAGAAGGAAGTAGAGGAAGCACAGAAAGTCATTAGTGGATTAAAGGAGAAAGCGGTGAATGCGTTGAATGGAACTGCAGAGGAACTCAAGTCGGCTTTCGAAGGTGCAGAGAAGGAGTTGAATTTGAACTGGCCTATAATTGCAGGTTCAACAGGAGTTGTTGCTGCCGTCGCTGCACTGGCCTTTGTTTTGTATGGAAGGCAAAGATAG 3117 43.05 MDGNFGRFIGFWFDGGLGKVHGKVGFCTCDPKFALPPPILPRMQPDQAKKNSTEVEFFSDYGDASRYKIQEVIGKGSYGVVCSAIDTRTGDKVAIKKIHNIFEHISDAVRILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTTMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPITKMEFEFERRRVTKEDIQELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGGKSAPVIPLDRKHVSLPRSTVVHSNPVYSKDQVNNVTLQDGKISEEAYGKNSRDSEGRLTNISRAMQAPQKIPFAKPGRVVGPVIADENGRLVKEPYDPRTLIRGAILPPAYHYHQKPVAGNQERSAAETKLDISLRAAKQASQCGMASKLGSDIAISIDSNPFYMTRAGVNKVELKDQISIDANFLQAKAAQYGGLSAATATATSVAHRKIIKAMDETRTQRKDMAVGSAAICCNRWARESNKKLSHSSNFVECLHQQAAEPEKSKGILMENEINIVNDGASGDDQTTEDFFDVDQRENDAKVAELNHRIEVLEREKKKLVDENEEIKDKIKRLSAEIEGLKSEEGRLIEQLKEMEKQVERSEEGNKVVESVAARALELETEVSRLQHDLISAMNGADEANAEVAELRKNLGEKGVKVAALEEELEALKKAKAESEKKVRELERKVGVLEVKEIEEKSKKVRVEEEMRDKIEEKEREITSFKKTIENLELVVTKNGLELDKWIKEKLKVEELLKESEEKTKMFESKMAQLQKEVEEAQKVISGLKEKAVNALNGTAEELKSAFEGAEKELNLNWPIIAGSTGVVAAVAALAFVLYGRQR 1038
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33016138 33024411 - ClCG02G018390.2 Cla02g01800 267926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01800 1038 Coils Coil 893 930 - -
Cla02g01800 1038 SMART serkin_6 67 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01800 1038 CDD STKc_TDY_MAPK 66 403 - -
Cla02g01800 1038 ProSitePatterns MAP kinase signature. 102 205 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cla02g01800 1038 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 51 535 - -
Cla02g01800 1038 Gene3D - 731 903 - -
Cla02g01800 1038 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 51 535 - -
Cla02g01800 1038 Pfam Protein kinase domain 67 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01800 1038 Coils Coil 988 1008 - -
Cla02g01800 1038 Gene3D Phosphorylase Kinase; domain 1 82 404 - -
Cla02g01800 1038 Coils Coil 735 891 - -
Cla02g01800 1038 PRINTS Tropomyosin signature 951 976 IPR000533 -
Cla02g01800 1038 PRINTS Tropomyosin signature 861 889 IPR000533 -
Cla02g01800 1038 PRINTS Tropomyosin signature 741 758 IPR000533 -
Cla02g01800 1038 PRINTS Tropomyosin signature 892 915 IPR000533 -
Cla02g01800 1038 ProSiteProfiles Protein kinase domain profile. 67 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01800 1038 ProSitePatterns Protein kinases ATP-binding region signature. 73 97 IPR017441 GO:0005524
Cla02g01800 1038 Gene3D Transferase(Phosphotransferase) domain 1 153 381 - -
Cla02g01800 1038 SUPERFAMILY Protein kinase-like (PK-like) 63 362 IPR011009 -
Cla02g01800 1038 Coils Coil 938 986 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01800 Cla-Chr2:33016138 Cla06g01427 Cla-Chr6:27853411 0 dispersed
Cla03g01543 Cla-Chr3:31056711 Cla02g01800 Cla-Chr2:33016138 6.84E-09 dispersed
Cla06g00537 Cla-Chr6:6447769 Cla02g01800 Cla-Chr2:33016138 0 transposed
Cla07g00987 Cla-Chr7:26083570 Cla02g01800 Cla-Chr2:33016138 0 transposed
Cla02g01800 Cla-Chr2:33016138 Cla09g02179 Cla-Chr9:39428202 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80364 PF00069 Pkinase 4.40E-66 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01800 - - csv:101216657 1165.6