Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01800 | ATGGATGGTAATTTTGGGAGGTTTATTGGGTTTTGGTTTGATGGAGGATTGGGGAAGGTTCATGGAAAAGTGGGCTTCTGCACTTGTGATCCGAAATTTGCACTTCCGCCCCCCATTTTGCCCAGAATGCAGCCAGATCAAGCCAAAAAGAATTCAACCGAAGTGGAGTTCTTTTCTGATTATGGAGATGCGAGTAGATACAAAATTCAGGAAGTAATCGGGAAAGGAAGCTATGGGGTTGTCTGTTCCGCAATTGACACCCGCACCGGCGACAAGGTTGCAATAAAGAAGATACATAATATTTTTGAGCATATATCTGACGCGGTTAGAATTCTTCGTGAGATAAAGCTGCTTAGACTTCTTCGCCATCCTGATATTGTTGAAATTAAACACATTATGCTGCCACCTTCAAGGAGGGATTTCAAAGATATCTATGTTGTTTTCGAGCTCATGGAATCAGATCTCCACCAAGTTATTAAAGCAAATGATGATCTGACTCGAGAACATTATCAGTTTTTCCTTTACCAACTTCTTCGTGCATTAAAATATATCCATACAGCGAATGTCTACCATCGTGATTTAAAACCAAAGAATATATTAGCAAATGCAAATTGTAAACTTAAAATTTGTGATTTTGGATTAGCAAGAGTTGCCTTCAGTGACACACCAACAACAATTTTCTGGACGGATTATGTTGCTACTAGATGGTACCGAGCTCCAGAGCTGTGTGGTTCATTTTTCTCGAAGTATACACCTGCAATTGATATATGGAGTATTGGCTGCATATTTGCTGAAGTATTAATGGGGAAGCCACTTTTTCCTGGTAAAAACGTTGTCCACCAGCTTGATTTGATGACAGATCTCCTTGGAACTCCTTCATTAGATACAATCTCCAGGGTACGTAATGACAAGGCTAGAAGATATTTAACTACTATGAGGAAAAAGCAGCCGGTACCATTTTCTCAAAAGTTCCCAAATGCAGATCCATTAGCGCTGAGGCTACTAGAAAGACTGCTTGCTTTTGATCCAAAAGATAGACCAACTGCTGAAGAGGCACTGGCTGATCCATACTTCAAGGGATTGGCAAAAATTGAGAGGGAACCTTCCTGCCAGCCAATCACAAAGATGGAATTTGAATTTGAGAGACGGAGGGTCACAAAAGAAGACATTCAAGAGCTAATCTTCCGGGAGATACTAGAATATCATCCTCAGCTACTAAAAGACTACATGAATGGGACGGAGAGAACGAATTTTCTATATCCAAGTGCTGTTGACCAATTTAGAAAGCAGTTTGCGCATCTGGAGGAAAATGGTGGTAAAAGTGCGCCAGTTATTCCTCTTGACAGAAAGCATGTGTCCCTTCCAAGGTCAACAGTTGTACATTCGAACCCGGTCTATTCTAAGGACCAAGTAAATAATGTAACTCTCCAAGATGGGAAGATCTCTGAAGAGGCATACGGCAAGAATTCCCGAGATAGTGAAGGACGGCTAACAAATATATCGAGGGCCATGCAGGCACCACAAAAAATCCCATTTGCTAAGCCTGGAAGAGTGGTTGGACCGGTTATAGCAGATGAGAATGGGAGGCTGGTGAAGGAACCATACGATCCAAGAACGTTGATCCGAGGTGCCATTCTTCCTCCTGCATATCACTACCACCAAAAACCCGTTGCTGGAAATCAAGAAAGATCTGCAGCAGAAACTAAACTTGATATTTCTTTAAGGGCCGCTAAGCAAGCATCCCAGTGTGGCATGGCTTCCAAATTAGGATCAGATATTGCCATCAGCATTGACTCGAACCCCTTTTACATGACACGTGCCGGAGTGAACAAGGTCGAACTCAAGGACCAAATATCCATCGATGCAAACTTTCTTCAGGCCAAGGCCGCCCAATACGGTGGTCTTAGTGCAGCAACAGCCACCGCCACATCGGTTGCTCACAGAAAGATTATAAAAGCCATGGATGAAACAAGAACTCAGAGGAAGGATATGGCCGTCGGCTCGGCTGCTATATGTTGTAATAGATGGGCGAGAGAGAGCAATAAGAAATTATCTCATTCTAGTAACTTTGTTGAATGTCTGCATCAGCAAGCCGCTGAACCGGAGAAATCAAAAGGAATATTAATGGAGAACGAGATTAATATTGTAAATGACGGGGCATCGGGGGACGATCAGACCACAGAGGATTTTTTTGATGTTGACCAGCGGGAGAACGATGCAAAGGTCGCGGAGCTGAACCATAGAATTGAGGTTTTGGAGCGTGAAAAGAAAAAATTGGTTGATGAAAATGAAGAAATCAAAGATAAGATTAAAAGGTTGTCAGCGGAGATTGAAGGGTTGAAGAGTGAAGAGGGGAGGCTGATAGAACAACTGAAAGAAATGGAGAAACAAGTTGAACGTTCTGAAGAGGGAAATAAGGTGGTAGAGTCGGTTGCGGCAAGGGCACTGGAGCTTGAGACTGAAGTCTCGAGGCTACAGCATGATTTGATATCTGCAATGAATGGAGCTGATGAGGCGAATGCTGAAGTTGCGGAGTTGAGGAAAAATTTGGGGGAAAAGGGAGTGAAGGTTGCAGCTCTGGAGGAAGAGTTGGAAGCCCTGAAGAAAGCAAAGGCAGAGAGTGAAAAGAAAGTCAGAGAATTGGAGAGGAAAGTTGGGGTTTTGGAGGTCAAGGAGATAGAGGAGAAGAGTAAAAAAGTTAGGGTAGAGGAGGAAATGAGAGACAAAATTGAGGAGAAAGAGAGGGAAATCACCAGTTTCAAAAAGACTATTGAGAATTTGGAATTGGTGGTAACAAAGAACGGCCTGGAATTAGATAAGTGGATCAAGGAGAAACTTAAGGTGGAAGAGTTGTTGAAGGAGTCAGAGGAGAAAACGAAAATGTTTGAGTCGAAAATGGCTCAGTTGCAGAAGGAAGTAGAGGAAGCACAGAAAGTCATTAGTGGATTAAAGGAGAAAGCGGTGAATGCGTTGAATGGAACTGCAGAGGAACTCAAGTCGGCTTTCGAAGGTGCAGAGAAGGAGTTGAATTTGAACTGGCCTATAATTGCAGGTTCAACAGGAGTTGTTGCTGCCGTCGCTGCACTGGCCTTTGTTTTGTATGGAAGGCAAAGATAG | 3117 | 43.05 | MDGNFGRFIGFWFDGGLGKVHGKVGFCTCDPKFALPPPILPRMQPDQAKKNSTEVEFFSDYGDASRYKIQEVIGKGSYGVVCSAIDTRTGDKVAIKKIHNIFEHISDAVRILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTTMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPITKMEFEFERRRVTKEDIQELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGGKSAPVIPLDRKHVSLPRSTVVHSNPVYSKDQVNNVTLQDGKISEEAYGKNSRDSEGRLTNISRAMQAPQKIPFAKPGRVVGPVIADENGRLVKEPYDPRTLIRGAILPPAYHYHQKPVAGNQERSAAETKLDISLRAAKQASQCGMASKLGSDIAISIDSNPFYMTRAGVNKVELKDQISIDANFLQAKAAQYGGLSAATATATSVAHRKIIKAMDETRTQRKDMAVGSAAICCNRWARESNKKLSHSSNFVECLHQQAAEPEKSKGILMENEINIVNDGASGDDQTTEDFFDVDQRENDAKVAELNHRIEVLEREKKKLVDENEEIKDKIKRLSAEIEGLKSEEGRLIEQLKEMEKQVERSEEGNKVVESVAARALELETEVSRLQHDLISAMNGADEANAEVAELRKNLGEKGVKVAALEEELEALKKAKAESEKKVRELERKVGVLEVKEIEEKSKKVRVEEEMRDKIEEKEREITSFKKTIENLELVVTKNGLELDKWIKEKLKVEELLKESEEKTKMFESKMAQLQKEVEEAQKVISGLKEKAVNALNGTAEELKSAFEGAEKELNLNWPIIAGSTGVVAAVAALAFVLYGRQR | 1038 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 33016138 | 33024411 | - | ClCG02G018390.2 | Cla02g01800 | 267926 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01800 | 1038 | Coils | Coil | 893 | 930 | - | - | |
Cla02g01800 | 1038 | SMART | serkin_6 | 67 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01800 | 1038 | CDD | STKc_TDY_MAPK | 66 | 403 | - | - | |
Cla02g01800 | 1038 | ProSitePatterns | MAP kinase signature. | 102 | 205 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Cla02g01800 | 1038 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 51 | 535 | - | - | |
Cla02g01800 | 1038 | Gene3D | - | 731 | 903 | - | - | |
Cla02g01800 | 1038 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 51 | 535 | - | - | |
Cla02g01800 | 1038 | Pfam | Protein kinase domain | 67 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01800 | 1038 | Coils | Coil | 988 | 1008 | - | - | |
Cla02g01800 | 1038 | Gene3D | Phosphorylase Kinase; domain 1 | 82 | 404 | - | - | |
Cla02g01800 | 1038 | Coils | Coil | 735 | 891 | - | - | |
Cla02g01800 | 1038 | PRINTS | Tropomyosin signature | 951 | 976 | IPR000533 | - | |
Cla02g01800 | 1038 | PRINTS | Tropomyosin signature | 861 | 889 | IPR000533 | - | |
Cla02g01800 | 1038 | PRINTS | Tropomyosin signature | 741 | 758 | IPR000533 | - | |
Cla02g01800 | 1038 | PRINTS | Tropomyosin signature | 892 | 915 | IPR000533 | - | |
Cla02g01800 | 1038 | ProSiteProfiles | Protein kinase domain profile. | 67 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01800 | 1038 | ProSitePatterns | Protein kinases ATP-binding region signature. | 73 | 97 | IPR017441 | GO:0005524 | |
Cla02g01800 | 1038 | Gene3D | Transferase(Phosphotransferase) domain 1 | 153 | 381 | - | - | |
Cla02g01800 | 1038 | SUPERFAMILY | Protein kinase-like (PK-like) | 63 | 362 | IPR011009 | - | |
Cla02g01800 | 1038 | Coils | Coil | 938 | 986 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01800 | Cla-Chr2:33016138 | Cla06g01427 | Cla-Chr6:27853411 | 0 | dispersed | |
Cla03g01543 | Cla-Chr3:31056711 | Cla02g01800 | Cla-Chr2:33016138 | 6.84E-09 | dispersed | |
Cla06g00537 | Cla-Chr6:6447769 | Cla02g01800 | Cla-Chr2:33016138 | 0 | transposed | |
Cla07g00987 | Cla-Chr7:26083570 | Cla02g01800 | Cla-Chr2:33016138 | 0 | transposed | |
Cla02g01800 | Cla-Chr2:33016138 | Cla09g02179 | Cla-Chr9:39428202 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80364 | PF00069 | Pkinase | 4.40E-66 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01800 | - | - | csv:101216657 | 1165.6 |