Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01803 | ATGGCATCTGGGAGTTCATTGAATGATCATTTATCCAAGAAGACTTCATTTTGGGGCTTGTCATTATGGGTTTTGATCTGCATTTGCATTGGTGCATTTATAGTTTTGATTCTTGGTTTGTTATCTATGTGGATCCTTTTTCGGAAAAAATCTAAGAGATCTGTGGACAAATTCCCTATTACCCAAATACCTAATTTTTCAAAAGATATCAGGATAGATCAGGTCGGGATTCAAATTCCCAATGACCACCCTGAACATAGACTTCTTTCAGTTGATGTCAAAAGAAATGAAGAAAATTCAGAAGTTATGGCTGTGACAAAATCAAGTGAACATGATAACCATAGCCAATGCAGTTCCACTTACCAACATGAAAAAGCTGGCAATCCACAATCAGGGGAAGAAGGAAGCTCTGGAAATGCTAGGAAGCAGACTTCGAGGTCGTATGGAGGATATGGAGGAATTGTGCCACCGTCTCCTCTCGTTGGCTTGCCAGAAATCTCACATCTTGGGTGGGGCCACTGGTTCACTCTCAGGGATCTAGAGCTTGCAACTAATCGCTTTTCTACCGAAAATATTCTTGGGGAAGGGGGATATGGGGTTGTGTATAAAGGCAGACTCATCAATGGCACTGAGGTTGCAGTGAAAAAACTACTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGTTGAAGTGGAGGCTATTGGTCACGTTCGGCATAAGAATCTTGTCCGACTGCTGGGTTATTGCATAGAGGGAGTTCATAGGATGCTAGTATATGAATATGTGAACAATGGCAATCTAGAACAGTGGCTACATGGAGCCATGTGCCAGCATGGCACGCTTACTTGGGAGGCTCGCATGAAGGTGCTTCTTGGCACTGCTAAGGCGCTTGCGTATTTACACGAAGCAATTGAGCCAAAAGTTGTTCACAGAGATATAAAATCAAGCAACATTTTGATTGATGACGAGTTCAATGCCAAAGTTTCTGATTTCGGATTGGCCAAACTCTTGGGCTCTGGAGAGAGTCACATCACAACTAGAGTTATGGGAACATTTGGGTATGTGGCACCAGAATATGCAAATACGGGCTTGTTGAATGAAAAGAGTGACATTTATAGCTTCGGTGTTCTCCTGCTAGAAGCAATTACAGGGAGGGACCCTGTGGATTATGCACGTCCTTCTAATGAGGTTAATCTGGTTGAGTGGCTAAAGATGATGGTAGCAACAAGGAGAGCAGAGGAAGTTGTGGACATGAACCTTGAGATCAAGCCAACTACTCGTGCTTTGAAACGTGCCCTTCTTGTTGCACTTAGGTGTATTGATCCTGAATCAATCAAGAGACCCAAGATGAGTCAAGTTGTAAGAATGCTTGAAGCCGACGAATTTCCACTCCACGAGGATAGAAGGAACCGAAAAAGCCGATCGATAAGCTTGGAGATCGAGTCAATGAAAGAAATATCAGGTCCAGAGCAGACGGGTGGGCCGTCCGAGAGCCATAAATCAGAGACAAGCCATGAATAG | 1524 | 43.44 | MASGSSLNDHLSKKTSFWGLSLWVLICICIGAFIVLILGLLSMWILFRKKSKRSVDKFPITQIPNFSKDIRIDQVGIQIPNDHPEHRLLSVDVKRNEENSEVMAVTKSSEHDNHSQCSSTYQHEKAGNPQSGEEGSSGNARKQTSRSYGGYGGIVPPSPLVGLPEISHLGWGHWFTLRDLELATNRFSTENILGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMCQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKRPKMSQVVRMLEADEFPLHEDRRNRKSRSISLEIESMKEISGPEQTGGPSESHKSETSHE | 507 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 33065120 | 33070528 | - | ClCG02G018430.1 | Cla02g01803 | 267929 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01803 | 507 | MobiDBLite | consensus disorder prediction | 100 | 151 | - | - | |
Cla02g01803 | 507 | Coils | Coil | 207 | 227 | - | - | |
Cla02g01803 | 507 | SMART | serkin_6 | 187 | 441 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01803 | 507 | Pfam | Protein kinase domain | 188 | 456 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01803 | 507 | MobiDBLite | consensus disorder prediction | 466 | 507 | - | - | |
Cla02g01803 | 507 | CDD | STKc_IRAK | 193 | 459 | - | - | |
Cla02g01803 | 507 | MobiDBLite | consensus disorder prediction | 109 | 146 | - | - | |
Cla02g01803 | 507 | ProSitePatterns | Protein kinases ATP-binding region signature. | 193 | 216 | IPR017441 | GO:0005524 | |
Cla02g01803 | 507 | SUPERFAMILY | Protein kinase-like (PK-like) | 171 | 463 | IPR011009 | - | |
Cla02g01803 | 507 | Gene3D | Phosphorylase Kinase; domain 1 | 169 | 262 | - | - | |
Cla02g01803 | 507 | PANTHER | OS01G0323000 PROTEIN | 3 | 499 | - | - | |
Cla02g01803 | 507 | ProSiteProfiles | Protein kinase domain profile. | 187 | 451 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01803 | 507 | MobiDBLite | consensus disorder prediction | 466 | 480 | - | - | |
Cla02g01803 | 507 | PANTHER | OS10G0497600 PROTEIN | 3 | 499 | - | - | |
Cla02g01803 | 507 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 309 | 321 | IPR008271 | GO:0004672|GO:0006468 | |
Cla02g01803 | 507 | Gene3D | Transferase(Phosphotransferase) domain 1 | 263 | 476 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01451 | Cla-Chr2:29062092 | Cla02g01803 | Cla-Chr2:33065120 | 0 | dispersed | |
Cla02g01803 | Cla-Chr2:33065120 | Cla06g00395 | Cla-Chr6:4846508 | 0 | dispersed | |
Cla08g00888 | Cla-Chr8:21363945 | Cla02g01803 | Cla-Chr2:33065120 | 2.23E-72 | transposed | |
Cla02g01803 | Cla-Chr2:33065120 | Cla09g02192 | Cla-Chr9:39516751 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80365 | PF00069 | Pkinase | 1.60E-48 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01803 | - | - | csv:101214087 | 964.911 |