Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01803 ATGGCATCTGGGAGTTCATTGAATGATCATTTATCCAAGAAGACTTCATTTTGGGGCTTGTCATTATGGGTTTTGATCTGCATTTGCATTGGTGCATTTATAGTTTTGATTCTTGGTTTGTTATCTATGTGGATCCTTTTTCGGAAAAAATCTAAGAGATCTGTGGACAAATTCCCTATTACCCAAATACCTAATTTTTCAAAAGATATCAGGATAGATCAGGTCGGGATTCAAATTCCCAATGACCACCCTGAACATAGACTTCTTTCAGTTGATGTCAAAAGAAATGAAGAAAATTCAGAAGTTATGGCTGTGACAAAATCAAGTGAACATGATAACCATAGCCAATGCAGTTCCACTTACCAACATGAAAAAGCTGGCAATCCACAATCAGGGGAAGAAGGAAGCTCTGGAAATGCTAGGAAGCAGACTTCGAGGTCGTATGGAGGATATGGAGGAATTGTGCCACCGTCTCCTCTCGTTGGCTTGCCAGAAATCTCACATCTTGGGTGGGGCCACTGGTTCACTCTCAGGGATCTAGAGCTTGCAACTAATCGCTTTTCTACCGAAAATATTCTTGGGGAAGGGGGATATGGGGTTGTGTATAAAGGCAGACTCATCAATGGCACTGAGGTTGCAGTGAAAAAACTACTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGTTGAAGTGGAGGCTATTGGTCACGTTCGGCATAAGAATCTTGTCCGACTGCTGGGTTATTGCATAGAGGGAGTTCATAGGATGCTAGTATATGAATATGTGAACAATGGCAATCTAGAACAGTGGCTACATGGAGCCATGTGCCAGCATGGCACGCTTACTTGGGAGGCTCGCATGAAGGTGCTTCTTGGCACTGCTAAGGCGCTTGCGTATTTACACGAAGCAATTGAGCCAAAAGTTGTTCACAGAGATATAAAATCAAGCAACATTTTGATTGATGACGAGTTCAATGCCAAAGTTTCTGATTTCGGATTGGCCAAACTCTTGGGCTCTGGAGAGAGTCACATCACAACTAGAGTTATGGGAACATTTGGGTATGTGGCACCAGAATATGCAAATACGGGCTTGTTGAATGAAAAGAGTGACATTTATAGCTTCGGTGTTCTCCTGCTAGAAGCAATTACAGGGAGGGACCCTGTGGATTATGCACGTCCTTCTAATGAGGTTAATCTGGTTGAGTGGCTAAAGATGATGGTAGCAACAAGGAGAGCAGAGGAAGTTGTGGACATGAACCTTGAGATCAAGCCAACTACTCGTGCTTTGAAACGTGCCCTTCTTGTTGCACTTAGGTGTATTGATCCTGAATCAATCAAGAGACCCAAGATGAGTCAAGTTGTAAGAATGCTTGAAGCCGACGAATTTCCACTCCACGAGGATAGAAGGAACCGAAAAAGCCGATCGATAAGCTTGGAGATCGAGTCAATGAAAGAAATATCAGGTCCAGAGCAGACGGGTGGGCCGTCCGAGAGCCATAAATCAGAGACAAGCCATGAATAG 1524 43.44 MASGSSLNDHLSKKTSFWGLSLWVLICICIGAFIVLILGLLSMWILFRKKSKRSVDKFPITQIPNFSKDIRIDQVGIQIPNDHPEHRLLSVDVKRNEENSEVMAVTKSSEHDNHSQCSSTYQHEKAGNPQSGEEGSSGNARKQTSRSYGGYGGIVPPSPLVGLPEISHLGWGHWFTLRDLELATNRFSTENILGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMCQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKRPKMSQVVRMLEADEFPLHEDRRNRKSRSISLEIESMKEISGPEQTGGPSESHKSETSHE 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33065120 33070528 - ClCG02G018430.1 Cla02g01803 267929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01803 507 MobiDBLite consensus disorder prediction 100 151 - -
Cla02g01803 507 Coils Coil 207 227 - -
Cla02g01803 507 SMART serkin_6 187 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01803 507 Pfam Protein kinase domain 188 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01803 507 MobiDBLite consensus disorder prediction 466 507 - -
Cla02g01803 507 CDD STKc_IRAK 193 459 - -
Cla02g01803 507 MobiDBLite consensus disorder prediction 109 146 - -
Cla02g01803 507 ProSitePatterns Protein kinases ATP-binding region signature. 193 216 IPR017441 GO:0005524
Cla02g01803 507 SUPERFAMILY Protein kinase-like (PK-like) 171 463 IPR011009 -
Cla02g01803 507 Gene3D Phosphorylase Kinase; domain 1 169 262 - -
Cla02g01803 507 PANTHER OS01G0323000 PROTEIN 3 499 - -
Cla02g01803 507 ProSiteProfiles Protein kinase domain profile. 187 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01803 507 MobiDBLite consensus disorder prediction 466 480 - -
Cla02g01803 507 PANTHER OS10G0497600 PROTEIN 3 499 - -
Cla02g01803 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Cla02g01803 507 Gene3D Transferase(Phosphotransferase) domain 1 263 476 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01451 Cla-Chr2:29062092 Cla02g01803 Cla-Chr2:33065120 0 dispersed
Cla02g01803 Cla-Chr2:33065120 Cla06g00395 Cla-Chr6:4846508 0 dispersed
Cla08g00888 Cla-Chr8:21363945 Cla02g01803 Cla-Chr2:33065120 2.23E-72 transposed
Cla02g01803 Cla-Chr2:33065120 Cla09g02192 Cla-Chr9:39516751 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80365 PF00069 Pkinase 1.60E-48 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01803 - - csv:101214087 964.911