Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01804 | ATGGCAGCTTCATCAATGGCTCTCTCCTCCCCATCTCTCGCCGGCCAAGCCGTCAAATTATCCCCCACGACCTCCGACCTCCTGGGCGACGGTCGCATCACCATGAGAAAAACTGCCGGAAAGCCCAAGCCCATTTCCTCCGGAAGCCCATGGTACGGCCCAGATCGCGTCAAATACCTAGGCCCATTCTCTGGCGAGCCCCCTTCTTATTTGACTGGAGAATTCCCCGGCGATTACGGCTGGGACACCGCCGGTTTATCCGCCGACCCGGAAACTTTCGCGAAAAACCGTGAGCTGGAAGTGATCCACTCGAGATGGGCCATGCTCGGCGCTCTGGGCTGCGTCTTCCCGGAGCTGCTGTCTCGCAACGGAGTAAAATTCGGCGAAGCCGTGTGGTTCAAAGCTGGGTCTCAAATCTTTAGCGAGGGTGGGCTAGATTATTTGGGGAACCCGAGCCTGGTCCACGCTCAGAGCATTTTAGCCATTTGGGCTTGTCAAGTTGTGCTAATGGGTGCGGTTGAAGGGTATAGAATTGCGGGGGGGCCATTGGGGGAAATTACTGACCCGATTTACCCAGGTGGGAGCTTTGATCCATTGGGGCTTGCTGATGATCCAGAGGCGTTTGCGGAATTGAAAGTGAAGGAACTTAAGAATGGAAGATTGGCTATGTTTTCGATGTTTGGTTTCTTTGTACAGGCGATTGTGACTGGGAAAGGACCTTTGGAGAATTTGGCTGATCATTTGGCCGATCCTGTTAACAATAATGCTTGGGCTTATGCTACTAACTTTGTACCTGGAAAGTGA | 804 | 53.11 | MAASSMALSSPSLAGQAVKLSPTTSDLLGDGRITMRKTAGKPKPISSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK | 267 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 33078485 | 33079288 | - | ClCG02G018440.1 | Cla02g01804 | 267930 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01804 | 267 | Pfam | Chlorophyll A-B binding protein | 67 | 233 | IPR022796 | - | |
Cla02g01804 | 267 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC | 1 | 267 | - | - | |
Cla02g01804 | 267 | SUPERFAMILY | Chlorophyll a-b binding protein | 50 | 264 | - | - | |
Cla02g01804 | 267 | Gene3D | Chlorophyll a/b binding protein domain | 58 | 260 | - | - | |
Cla02g01804 | 267 | MobiDBLite | consensus disorder prediction | 28 | 50 | - | - | |
Cla02g01804 | 267 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 267 | IPR001344 | GO:0009765|GO:0016020 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g02380 | Cla-Chr1:37494120 | Cla02g01804 | Cla-Chr2:33078485 | 0 | dispersed | |
Cla02g01804 | Cla-Chr2:33078485 | Cla10g01121 | Cla-Chr10:25634840 | 5.66E-171 | dispersed | |
Cla08g00194 | Cla-Chr8:3955913 | Cla02g01804 | Cla-Chr2:33078485 | 6.56E-67 | transposed | |
Cla11g01861 | Cla-Chr11:32115231 | Cla02g01804 | Cla-Chr2:33078485 | 1.30E-60 | transposed | |
Cla01g02379 | Cla-Chr1:37491657 | Cla02g01804 | Cla-Chr2:33078485 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01804 | K08912 | - | csv:101213845 | 540.806 |