Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01810 | ATGAACCGTCTCATTCAGACCAACATCACGCAAAAACCTCAAACTGTCATGAGCAGAACTTTACGAGAAGGAAACGTGTTCTATGACTTTTCCCACGATAGTCTCCTCTTTTTTCGAGCCACAAAAAATGACTGGAAGGCGATCAAGTTGGCGTTACAAATTTATGAAAAAGGATTCATATTCGCCAGTGTTTTGCCTAGGTCTTCAGCTTTCTTTGTAATTCCCCATGTCCAATTAAAACTCTCGATTTCTTGTTGCTCCGCTCCCCAACTCTTTTCGCCATTGTTGGAGCTTCAATTTTCAGCCCAAACGCCTGATCGGTTGCCGAAAAGCTTTCGTTGTAAATTGGTGTTTTTATTTCAAATCAAGGAATTGTGCATGAGGCAATGCTATCAGTTTCTCTTGCTAGTGGTGTTTGCATGGTTCGTGAAAGGATTGAATGCTAGTGCAGGAGATATTGACCCACAATACAGTTCCCCTCAGTTTTATGAATACCTAGTTTTGCCCCCCAATTGTAATCTTGGTATTCCTTTTGCATTCAGTGATCACAATCTATGCTGCGTGCTCCTATTTTGTTCTGGCTTGACTTGTGTTAAACACTGTGAAGAAATAGGATGCATTGATCAGCAATGCTTTCCTCAGTGCAAATTCTCTTCGGATGGTGTTTCTGTTGATCAGCCTTGGTATATGCAAGAACCACTTTACTTAAGGTGGAAACAATGGGACTGCCAAAGTGATTGCCGTTACCATTGTATGGTTAAACGGGAGAGTCAAAGAGAAGCACTTGGTTATCATCCTGTTAAATATCATGGCAAATGGCCCTTCAAGCGTATATATGGGATCCAGGTTTGTTTTATCAAATTACTCGAGCAACTCCATGAACCTGTTTCTGTAGCATTCTCTGCCCTCAACCTTTCAATGCATTTTCATGGCTGGCTGTCCTTTTTTGTCCTTCTATATTACAAGTTACCTTTGAGACAAGACAAGAAGGCATATTATGAATTTGCCAGTTTGTGGCACATTTATGCGCTCTTTTCAATGAACTCTTGGTTTTGGAGTGCTGTTTTCCACAGTCGTGATGTGGATTTGACCGAGAAATTAGATTACTCATCTGCTGTGGCAGTACTTGGGTTTTCACTCATTCTGGCGATTCTAAGAAGTTTCAATGTGAGACATGAGGCTACCAGAGTTATGGTTGCAGCTCCTTTGCTTGCTTTTGCACTTACACATATCTTATACATCAACTTCTACGAACTGGATTATGTGTTCTTTCTAGTTCGTTTAGCACATTTACCGCATCATTTTTTCTTCATGCAAGCTATTCTTCTAAATTTTTTCCCCCATATTCAAACCAATCGGCCCATGCTTGGTGGCTGGAATATGATTGTTTGTGTTACCATGGGGGTTTCTCAACTTCTAATTTGGGCAATCTGGGCTGGTGTAACTCATCATCCTTCTCGCTGGAAACTGTGGACGGTGGTTGTGGGCGGTGGCTTAGCACTTCTACTGGAAATCTATGATTTTCCACCTGAGGAGCTTAAATTGTACCAGATTTTGATTGATTCAATTTTAGTTCTAAATAACAAAACTAGTTTTATGTTTCATAGATTTTATAATATTGATGTTAAAAACGAGTTTAGCTACGCGATTTTTAGATTTATGCTAACAATCTTATTTTGGGACATTGTCAAATTTGAAGACTTGTCAAGATGGTTAGTGAAGTTTACAGTTGAAGAGCTTCGTAGGATTATGGACTTCAAGCATAACATTCGTAATATGTCTGTTATTGCTCATGTCGATCATGGGAAGTCCACTCTCACAGATTCTCTTGTGGCTGCTGCTGGTATCATTGCTCAAGAAGTTGCGGGTGATGTTCGGATGACAGATACCCGTCAAGATGAGGCAGAACGGGGTATTACCATCAAATCGACTGGCATCTCCCTCTATTATGAGATGTCTGATGAATCATTGAAAAATTATAAGGGAGAGAGGCAGGGAAATGAGTACCTTATCAATCTTATTGATTCGCCTGGGCATGTTGACTTCTCATCCGAGGTTACAGCTGCTCTACGAATTACTGATGGTGCGCTTGTGGTGGTGGATTGTGTTGAAGGAGTTTGTGTCCAAACAGAGACAGTGCTTCGTCAGGCGTTGGGAGAGAGGATTCGTCCTGTGTTGACAGTTAACAAGATGGACAGATGCTTCCTTGAGCTTCAAGTAGATGGGGAAGAGGCTTATCAGACCTTCTCGAGAGTTATTGAGAATGCTAATGTGATCATGGCTACATATGAGGATCCACTTCTTGGTGATGTCCAAGTGTATCCTGAGAAGGGAACAGTTGCTTTCTCTGCTGGTTTGCACGGTTGGGCTTTCACCCTGACTAACTTTGCAAAGATGTATGCCTCTAAATTTGGAGTAGATGAGGCTAAGATGATGGAGAGGCTTTGGGGTGAGAACTTCTTTGACCCTGCCACCAAGAAATGGACCACCAAGAACACTGGATCTGCAACGTGCAAGCGTGGATTTGTTCAGTTCTGCTATGAACCTATCAAGCAGATCATTGCAACTTGTATGCATGACCAGAAGGACAAGCTATGGCCTATGTTGCAGAAACTTGGAGTTGTCATGAAGTCTGAAGAGAAGGATCTGATGGGAAAAGCATTGATGAAGCGAGTCATGCAAACGTGGCTCCCAGCAAGCAATGCTCTTTTGGAAATGATGATCTTTCATCTCCCTTCCCCTGCCACGGCCCAAAAGTATCGTGTGGAGAATTTGTATGAGGGTCCACTAGATGATGTGTATGCAAGTGCCATCAGAAGTTGTGACCCTGAGGGACCTCTTATGCTTTATGTATCAAAGATGATTCCTGCATCGGACAAGGGCAGGTTCTTTGCCTTTGGTCGGGTCTTCTCTGGGAGGGTTTCAACTGGTTTGAAAGTTAGAATCATGGGTCCCAACTATGTTCCTGGTGAGAAGAAAGACTTGTATGTTAAGAGCGTCCAGAGAACTGTCATTTGGATGGGAAAGAAGCAAGAAACTGTGGAGGATGTGCCTTGTGGTAACACCGTTGCCATGGTTGGATTGGATCAATTCATCACAAAGAATGCTACTCTGACAAACGAGAAGGAAGTTGATGCTCATCCAATTCGAGCCATGAAATTTTCTGTATCTCCCGTTGTGCGTGTGGCTGTTCAGTGCAAGGTGGCATCTGATCTTCCCAAGCTCGTGGAAGGGCTTAAACGTCTGGCGAAGTCAGATCCTATGGTTGTGTGTACCATGGAGGAATCTGGTGAGCACATTGTTGCTGGTGCCGGAGAACTACATCTTGAGATCTGTCTGAAGGATTTGCAAGAGGATTTCATGGGTGGAGCTGAGATCATAAAATCTGACCCTGTTGTCTCTTTCCGTGAAACCGTCCTTGAGAGGTCATGCCGCACGGTGATGAGTAAATCCCCCAACAAACACAATCGTCTATACATGGAAGCACGACCCATGGAGGAAGGACTGGCAGAGGCTATCGATGATGGCCGCATTGGACCACGAGATGATCCTAAAGTTCGTTCTAAAATTTTGTCGGAGGAATTCGGTTGGGACAAAGATCTCGCTAAGAAGATTTGGTGCTTTGGGCCTGAGACTACTGGCCCCAACATGGTTGTTGATATGTGTAAGGGAGTTCAATATCTGAATGAAATCAAGGATTCTGTTGTTGCCGGTTTCCAATGGGCCTCTAAAGAAGGTGCATTGGCCGAAGAAAACATGAGAGGCATCTGTTTTGAAGTGTGCGATGTGGTTCTTCATGCTGATGCCATCCACAGAGGAGGAGGTCAAGTCATTCCCACAGCTAGGAGGGTAATTTACGCTTCTCAGTTGACAGCCAAACCCAGACTTCTTGAGCCAGTATACTTGGTGGAAATTCAAGCTCCAGAGCAAGCTCTTGGAGGTATCTACAGTGTTCTTAACCAGAAGCGTGGACACGTATTTGAGGAAATGCAGAGGCCCGGTACCCCTCTTTACAACATCAAGGCATATCTCCCCGTCATCGAGTCATTCGGATTCTCGAGCACTCTGAGAGCTGCAACGTCTGGACAGGCATTCCCACAGTGTGTGTTTGACCATTGGGACATGATGTCTTCAGATCCATTAGAAAGTGGGTCTCAAGCTGCGCAGTTGGTTGCTGATATCAGGAAGAGGAAGGGATTGAAGGAGCAGATGACTCCATTGTCCGAGTTCGAAGACAAGCTATAA | 4245 | 43.82 | MNRLIQTNITQKPQTVMSRTLREGNVFYDFSHDSLLFFRATKNDWKAIKLALQIYEKGFIFASVLPRSSAFFVIPHVQLKLSISCCSAPQLFSPLLELQFSAQTPDRLPKSFRCKLVFLFQIKELCMRQCYQFLLLVVFAWFVKGLNASAGDIDPQYSSPQFYEYLVLPPNCNLGIPFAFSDHNLCCVLLFCSGLTCVKHCEEIGCIDQQCFPQCKFSSDGVSVDQPWYMQEPLYLRWKQWDCQSDCRYHCMVKRESQREALGYHPVKYHGKWPFKRIYGIQVCFIKLLEQLHEPVSVAFSALNLSMHFHGWLSFFVLLYYKLPLRQDKKAYYEFASLWHIYALFSMNSWFWSAVFHSRDVDLTEKLDYSSAVAVLGFSLILAILRSFNVRHEATRVMVAAPLLAFALTHILYINFYELDYVFFLVRLAHLPHHFFFMQAILLNFFPHIQTNRPMLGGWNMIVCVTMGVSQLLIWAIWAGVTHHPSRWKLWTVVVGGGLALLLEIYDFPPEELKLYQILIDSILVLNNKTSFMFHRFYNIDVKNEFSYAIFRFMLTILFWDIVKFEDLSRWLVKFTVEELRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMSDESLKNYKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDEAKMMERLWGENFFDPATKKWTTKNTGSATCKRGFVQFCYEPIKQIIATCMHDQKDKLWPMLQKLGVVMKSEEKDLMGKALMKRVMQTWLPASNALLEMMIFHLPSPATAQKYRVENLYEGPLDDVYASAIRSCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGRVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTMEESGEHIVAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPLESGSQAAQLVADIRKRKGLKEQMTPLSEFEDKL | 1414 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 33134579 | 33148945 | - | ClCG02G018490.2 | Cla02g01810 | 267936 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01810 | 1414 | SMART | EFG_IV_2 | 1177 | 1293 | IPR005517 | GO:0005525 | |
Cla02g01810 | 1414 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 1133 | 1297 | IPR020568 | - | |
Cla02g01810 | 1414 | CDD | EF2_snRNP_III | 1058 | 1130 | - | - | |
Cla02g01810 | 1414 | SUPERFAMILY | EF-G C-terminal domain-like | 1055 | 1131 | IPR035647 | - | |
Cla02g01810 | 1414 | Pfam | Elongation factor Tu domain 2 | 965 | 1038 | IPR004161 | GO:0005525 | |
Cla02g01810 | 1414 | CDD | EF2 | 591 | 801 | - | - | |
Cla02g01810 | 1414 | SUPERFAMILY | EF-G C-terminal domain-like | 1298 | 1409 | IPR035647 | - | |
Cla02g01810 | 1414 | Gene3D | Translation factors | 914 | 1055 | - | - | |
Cla02g01810 | 1414 | CDD | EF2_II | 946 | 1041 | - | - | |
Cla02g01810 | 1414 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 1057 | 1134 | - | - | |
Cla02g01810 | 1414 | SMART | EFG_C_a | 1295 | 1384 | IPR000640 | - | |
Cla02g01810 | 1414 | Gene3D | - | 1141 | 1293 | IPR014721 | - | |
Cla02g01810 | 1414 | CDD | eEF2_snRNP_like_C | 1298 | 1376 | - | - | |
Cla02g01810 | 1414 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 588 | 915 | IPR000795 | GO:0003924|GO:0005525 | |
Cla02g01810 | 1414 | Pfam | Elongation factor G, domain IV | 1182 | 1293 | IPR005517 | GO:0005525 | |
Cla02g01810 | 1414 | SUPERFAMILY | Translation proteins | 913 | 1047 | IPR009000 | - | |
Cla02g01810 | 1414 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 575 | 912 | IPR027417 | - | |
Cla02g01810 | 1414 | Pfam | Per1-like family | 440 | 510 | IPR007217 | GO:0006506 | |
Cla02g01810 | 1414 | Pfam | Per1-like family | 233 | 423 | IPR007217 | GO:0006506 | |
Cla02g01810 | 1414 | Gene3D | - | 1294 | 1414 | - | - | |
Cla02g01810 | 1414 | Pfam | Elongation factor Tu GTP binding domain | 588 | 913 | IPR000795 | GO:0003924|GO:0005525 | |
Cla02g01810 | 1414 | PRINTS | GTP-binding elongation factor signature | 672 | 682 | IPR000795 | GO:0003924|GO:0005525 | |
Cla02g01810 | 1414 | PRINTS | GTP-binding elongation factor signature | 688 | 699 | IPR000795 | GO:0003924|GO:0005525 | |
Cla02g01810 | 1414 | PRINTS | GTP-binding elongation factor signature | 724 | 733 | IPR000795 | GO:0003924|GO:0005525 | |
Cla02g01810 | 1414 | PRINTS | GTP-binding elongation factor signature | 636 | 644 | IPR000795 | GO:0003924|GO:0005525 | |
Cla02g01810 | 1414 | PRINTS | GTP-binding elongation factor signature | 592 | 605 | IPR000795 | GO:0003924|GO:0005525 | |
Cla02g01810 | 1414 | PANTHER | - | 572 | 1413 | - | - | |
Cla02g01810 | 1414 | Pfam | Elongation Factor G, domain III | 1058 | 1120 | IPR041095 | - | |
Cla02g01810 | 1414 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 572 | 1413 | - | - | |
Cla02g01810 | 1414 | CDD | aeEF2_snRNP_like_IV | 1130 | 1302 | - | - | |
Cla02g01810 | 1414 | TIGRFAM | small_GTP: small GTP-binding protein domain | 591 | 747 | IPR005225 | GO:0005525 | |
Cla02g01810 | 1414 | Gene3D | - | 574 | 808 | IPR027417 | - | |
Cla02g01810 | 1414 | Pfam | Elongation factor G C-terminus | 1295 | 1382 | IPR000640 | - | |
Cla02g01810 | 1414 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 629 | 644 | IPR031157 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01791 | Cla-Chr2:32932713 | Cla02g01810 | Cla-Chr2:33134579 | 0 | dispersed | |
Cla02g01793 | Cla-Chr2:32950219 | Cla02g01810 | Cla-Chr2:33134579 | 0 | dispersed | |
Cla02g01810 | Cla-Chr2:33134579 | Cla09g00996 | Cla-Chr9:10481769 | 2.87E-130 | dispersed | |
Cla06g00237 | Cla-Chr6:2926862 | Cla02g01810 | Cla-Chr2:33134579 | 2.58E-34 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01810 | K03234 | - | csv:101208886 | 1649.8 |