Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01816 ATGTTTCTCGCAGGAAAGGTCGAAGAAACCCCTCGCCCATTGAAGGATGTTATCATGGTCTCATATGAAATCATCAACAAAAAGGATCCTACTGCAGCCCAGAAGATTAGGCAAAAGGAGGTGTATGAACGGCAAAAAGAGTTAATTTTACTTGGGGAGAGAGTTGTTCTCGCAACTCTTGGTTTTGATCTTAATGTGCACCATCCCTACAAACCCCTTGTCGAGGCAATTAAAAAATTCAAAGTTGCTCAAAATGCCTTGGCTCAGGTAGCTTGGAATTTCGTCAATGATGGATTGCGGACATCTCTTTGCTTGCAATTTAAGCCTCACCATATTGCGGCCGGTGCCATTTTCCTTGCTGCCAAATTTCTCAAAGTTAAACTCCCATCAGATGGGGAAAAGGTGTGGTGGCAAGAGTTTGATGTCACCCCACGGCAATTGGAGGAAGTCAGCAATCAAATGTTAGAACTTTATGAACAAAATCGATTGCCGCCTTCTGGCGAAGCTGATGGAAGCATTGGAGGTGGTCCCACTAATCAAACCCCTACAAAAGCTCCTACCAACAGCGAAGAACGTGCCGTAGCAGACAATCATGCACTTGGTGCAGGTGACCAGCCATCAAGAGCAATGCAGAATCATAGTATTGAAAGTTCGAGCGTAGATTTTAGAAGTCCTTCCAATCACAAAACAGGTAGTGAATCTAAGGTTAGACACGAGATGGAGCCATCGGCTTTCCATGACAAAGGAAACGCTCTAAACTCGGTAAAGCATCAGTCAGAGGGATTGGTTGAGCAAGACCATGGAAATGATATGAAAATAAATGAAGCAACAACAAGGGATGCAATGGAACTGAAAGACAAACATGTAATTCGAAATATAGATTTTAGAGAAGGTACACTTGGCAAATCTCAGGACGTTATCAAAAAAATTGATAAGGACAAAGTAAAGGCTGCGCTTGAGAAACGAAGGAAGTCTCTTGGCAGCATGACCCAGAAAAAAGAATTGATGGATGAGGATGATCTCATTGAAAGGGAGTTGGAAGCTGGTGTTGAGATGGCTGTTGGCAGTGAGAAAAACAAGCGAGAACAGAGGCAAAGTTGGAATAAGTCATCGAATAAACAAGAATATGAGGATTCATATCAAGACAAACATCGAGAGGACGATAAAGACGAGCATCCTCAACGAACGCGACAGTCATTATATAATCTAGATTCTAGCAACATAGAAGAAGGGGAGTTTGCAAATGCTAATGAAGTAGACCAAACCAATGAACAAAAGAGAGTACGGCAATTAATTAATCGATCGCAAGTTATTCCCTTTTGTGGAGAATTTTTCGTTTTTGAGATCGATCGACTCGATCTTGCGCGTAAAATCACCTCCATGGCGATTGCTTCTCGTGTGTCGAATCTTGAAGCTGACATGATAAGGATGAAGCACAAGCTCAAAGAGAAGGAAAAAACCATTTATGACCTACAGGAGAAGTTGTCTCACCTCGAGCACGCGAACCAGGAAGCTGAATCTAGGTTGAAGATTGCGCTTGATGATAATATGAGGCTTTCCAGGGAACGGGATTCACTATCAATGACTTCAAAGAAACTTGGACGTGATTTGGCAAAGCTGGAGACATTTAAAAGACAACTTATGCTATCATTGAGTGATGAATCCTCTCAAACTGAAACTGTTGATATTGGGACCTGTGATCAAGCAGTTCCGAAAACATATACTGACAAGGAAACGAGAAGCACAATGGATGAAGGAAAACATATTGGACAGAGATTTTCATCGCCGTATATCACCCCAAGGCTCACTCCATCTGCAACTCCAAAAATTATTTCAACGAGTGTATCCCCCAGAGGGTATTCCACCGTTGCTTCTCCACAAATAACGTCTGGTTCAACTTCTCCAACAAAACCCTCATATGATGGACGGATTGCACTATCTCCATGGTACCCATCAAGCCAGCAGTCTTCAGCAGCAAGTTCTCCTCCTCGTTCTCGTCAACTGGCTGGCCGCCCTGCTCGAGTGGATGGCAAGGAATTTTTCCGCTTAGCCAGGAGTCGTCTGCAATACGAGCAGTTTAGTGCCTTCCTTTCGAACATAAAGGAACTCAATGCTCAAAAGCAGACTAGAGAGGAAACTTTAAGAAAAGCAGAAGAGATATTTGGGACAGATAACAAAGATCTTTTTCTGTCATTTCAAGGATTGCTTAACCGCAATACTCACTATGTTATTGTAAAGTATAAAAGATCAAACCCTGTTGGAGTTGAAACTTCTTTTTTCTGTAGAAACGATGAGTTTGGTTTTTTGAAGATTGTAGCATCTAAAGCTGCAGCCAGTCTCTGTGACAACTCTATTTGGGGAAAGGGCTGGCTTGCAAGAGAACCAGAAAAGTTATCATCATATGCTCCAAAATCAGCGTACGTTCACTTGCAAGCTATCTGCTCCATCACAACGCCAACTTGTCTAGTCAGGCAAAACACAGAGGCTGACGGAAAGATAAGATTTTGGTCAAAAGAATCTGCAAAAATGGCTGTCACTAGTTTTGATAAGATTGAGGTTCGCAAGTTGTTCCTTCTCTTTCGGCATAAATATGAGGTTGAATAA 2604 42.28 MFLAGKVEETPRPLKDVIMVSYEIINKKDPTAAQKIRQKEVYERQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRLPPSGEADGSIGGGPTNQTPTKAPTNSEERAVADNHALGAGDQPSRAMQNHSIESSSVDFRSPSNHKTGSESKVRHEMEPSAFHDKGNALNSVKHQSEGLVEQDHGNDMKINEATTRDAMELKDKHVIRNIDFREGTLGKSQDVIKKIDKDKVKAALEKRRKSLGSMTQKKELMDEDDLIERELEAGVEMAVGSEKNKREQRQSWNKSSNKQEYEDSYQDKHREDDKDEHPQRTRQSLYNLDSSNIEEGEFANANEVDQTNEQKRVRQLINRSQVIPFCGEFFVFEIDRLDLARKITSMAIASRVSNLEADMIRMKHKLKEKEKTIYDLQEKLSHLEHANQEAESRLKIALDDNMRLSRERDSLSMTSKKLGRDLAKLETFKRQLMLSLSDESSQTETVDIGTCDQAVPKTYTDKETRSTMDEGKHIGQRFSSPYITPRLTPSATPKIISTSVSPRGYSTVASPQITSGSTSPTKPSYDGRIALSPWYPSSQQSSAASSPPRSRQLAGRPARVDGKEFFRLARSRLQYEQFSAFLSNIKELNAQKQTREETLRKAEEIFGTDNKDLFLSFQGLLNRNTHYVIVKYKRSNPVGVETSFFCRNDEFGFLKIVASKAAASLCDNSIWGKGWLAREPEKLSSYAPKSAYVHLQAICSITTPTCLVRQNTEADGKIRFWSKESAKMAVTSFDKIEVRKLFLLFRHKYEVE 867
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33254295 33263095 - ClCG02G018560.2 Cla02g01816 267942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01816 867 MobiDBLite consensus disorder prediction 162 238 - -
Cla02g01816 867 SUPERFAMILY Cyclin-like 1 66 IPR036915 -
Cla02g01816 867 PANTHER CYCLIN 1 202 IPR043198 GO:0006357|GO:0016538
Cla02g01816 867 PANTHER CYCLIN 205 391 IPR043198 GO:0006357|GO:0016538
Cla02g01816 867 SUPERFAMILY Cyclin-like 67 163 IPR036915 -
Cla02g01816 867 Gene3D - 1 64 - -
Cla02g01816 867 MobiDBLite consensus disorder prediction 173 190 - -
Cla02g01816 867 Gene3D - 66 166 - -
Cla02g01816 867 Coils Coil 700 720 - -
Cla02g01816 867 MobiDBLite consensus disorder prediction 375 397 - -
Cla02g01816 867 SMART cyclin_7 71 156 IPR013763 -
Cla02g01816 867 MobiDBLite consensus disorder prediction 648 664 - -
Cla02g01816 867 MobiDBLite consensus disorder prediction 577 672 - -
Cla02g01816 867 MobiDBLite consensus disorder prediction 353 407 - -
Cla02g01816 867 Coils Coil 467 522 - -
Cla02g01816 867 MobiDBLite consensus disorder prediction 353 368 - -
Cla02g01816 867 PANTHER - 1 202 - -
Cla02g01816 867 PANTHER - 205 391 - -
Cla02g01816 867 MobiDBLite consensus disorder prediction 596 640 - -
Cla02g01816 867 MobiDBLite consensus disorder prediction 207 227 - -
Cla02g01816 867 CDD CYCLIN 65 126 IPR013763 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00884 Cla-Chr1:11134254 Cla02g01816 Cla-Chr2:33254295 4.00E-138 dispersed
Cla02g01816 Cla-Chr2:33254295 Cla08g01465 Cla-Chr8:27569075 1.29E-71 dispersed
Cla02g01816 Cla-Chr2:33254295 Cla05g00602 Cla-Chr5:5502008 2.19E-32 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01816 K15188 - csv:101220862 768.459