Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01831 ATGAGTTCGAACACCGCGTCTAGCTCCGGAGGTCCGGGATCGAACGATTCATCATCAAATAGAAGGAATTCGAAGCGACCTAAATATTCGAGGTTTACCCAGCAGGAACTTCCAGCGTGTAAACCCATTCTCACACCAAGATGGGTGATTTCTGCATTCATGTTAGTTAGCATTATCTTTGTTCCCATTGGAGTTGCTTCCTTGTTTGCTTCCAGAGATGTCGTTGAAATAATTGATCGTTATGAAACTGAGTGCATACCAGAACAATTTAGAAACGATAAGGTTGGGTTCATACAGGGCCCTGCAGTTAAAACTTGCCGCAGAAACATAACTGTGCCGAAACGTATGAAACAACCAATATATGTTTATTACCAGCTTGACAATTTCTACCAGAACCACCGCAGATACGTGCAGAGCCGTAGTGATAAGCAATTGAGAGATGCTGGCAGCGCGCATGATACAAGCTCTTGCAAGCCCGAAGACAATGTGAATGGGCAGCCAATCGTTCCCTGTGGTTTGATAGCATGGAGTTTGTTTAATGATACTTATAACTTCACCCTTAACAAGAAGCAAGTCGATGTGAATAAGGTCGGTATTTCATGGAAGAGTGACCGGGAACATAAATTCGGCAAGAATGTATTTCCCAAGAACTTTCAAAATGGTACACTGAAAGGAGGCAAAACCCTTGATGCAGACAAACCATTGAGTCAACAGGAGGACCTTATTGTGTGGATGCGAACTGCTGCTCTTCCCACATTCAGAAAGTTATATGGAAAGATAGAGGTCGACCTTGAGAAAAATGATGTAATAGATGTGGTTTTGGAGAACAATTATAACACTTACAGTTTTAACGGCAAGAAAAAGCTTGTGCTTTCTACAACTAGCTGGCTTGGTGGGAAGAATGATTTTCTTGGAATTGCTTATCTTACTGTTGGTGGGTTATGCTTCTTTTTGGCAATGGCTTTCACAGTCGTCTATCTTGTTAAGCCAAGGCGACTTGGGGACCCGTCATATCTGTCATGGAATAGAAACCCAGGTGGCCACTGA 1047 42.79 MSSNTASSSGGPGSNDSSSNRRNSKRPKYSRFTQQELPACKPILTPRWVISAFMLVSIIFVPIGVASLFASRDVVEIIDRYETECIPEQFRNDKVGFIQGPAVKTCRRNITVPKRMKQPIYVYYQLDNFYQNHRRYVQSRSDKQLRDAGSAHDTSSCKPEDNVNGQPIVPCGLIAWSLFNDTYNFTLNKKQVDVNKVGISWKSDREHKFGKNVFPKNFQNGTLKGGKTLDADKPLSQQEDLIVWMRTAALPTFRKLYGKIEVDLEKNDVIDVVLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLAMAFTVVYLVKPRRLGDPSYLSWNRNPGGH 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33450777 33453556 - ClCG02G018720.1 Cla02g01831 267957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01831 348 MobiDBLite consensus disorder prediction 141 161 - -
Cla02g01831 348 PANTHER ALA-INTERACTING SUBUNIT 3 7 347 - -
Cla02g01831 348 MobiDBLite consensus disorder prediction 1 20 - -
Cla02g01831 348 MobiDBLite consensus disorder prediction 1 31 - -
Cla02g01831 348 PIRSF Lem3/Cdc50 1 344 IPR005045 GO:0016020
Cla02g01831 348 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 68 332 IPR005045 GO:0016020
Cla02g01831 348 PANTHER CELL CYCLE CONTROL PROTEIN 50 7 347 IPR005045 GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01831 Cla-Chr2:33450777 Cla05g01120 Cla-Chr5:11721375 1.26E-166 dispersed
Cla02g01831 Cla-Chr2:33450777 Cla01g02425 Cla-Chr1:37853270 3.93E-129 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01831 - - csv:101216400 639.032