Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01832 | ATGACTATGACGGTCGCTGCAAGAGCAATCGCTGCAGCTCGATCAATGGCGCGATCGAGCAGTTTCCCTCTAAAATCTCCATCTTCTTATGTGTTCGCTGCGCAGAAATCTCACTCCCACACTCTTCTCATTCGTCAGGTTCACAATCCAGCTAATGGTGAAGTTATAACCAATGTCCCGCTCATGGGCAAAAGGGAGACCGATGATGCTATTTCTTCAGCTTATGATGCTTTTAAGTCTTGGAGCAAGCTCACTGCAGCTGATCGGAGTAATCGCTTACGCAAATGGTATGAGCTCCTAATTGCCCACAAAGAAGAGATTGGACAACTGATAACCTTAGAGCAAGGCAAACCCTTAAAGGAAGCTGTGGGTGAGACTAACTATGGAGCCAGCTTTATTGAGTTCTATTCTGAGGAAGCAAAACGGATATATGGTGACATAATTTCACCAACTATGGCCGATCGTCGAATTTTGGTCTTGAAGCAGCCAGTTGGAGTTGTTGGTGTTGTTACCCCTTGGAACTTTCCGTTGGCTATGATTACGCGGAAGGTTGGACCTGCTCTTGCATGTGGTTGTACGGTGGTCATAAAACCCTCTGAGCTTACCCCCTTGACAGCTTTAGCAGCAGCCGAGCTCTCACTTCAAGCTGGAATTCCCCCAGGTGTTGTGAATGTGGTTATGGGAGATGCTCCTGCTATTGGCGATGCTATACTCGCAAGTTCTCAGGTAAGAAAGATCACGTTTACTGGCTCAACAGCAGTTGGAAAAAAGTTGATGGCAGGAGCTGCTGGAACTGTTAAAAGGGTGTCCTTTGAACTTGGTGGTAATGCCCCTTGCATAGTATTTGATGACGCAGATGTGGATGTTGCAGTAAAAGGAGCTGTGAACCAATGCCTGTCTATCCAGGATTATGGCTTTGAAACAATCCTGCTCAACATGATTAATGTAATTAGCACTTACCATGATGCATCAATATCTACTTGTAAGTGCATACTACCTAGGGATGTGGGTCTATTCAACCACGACTCTTTCCTGCAATTGCAGCAAAGTTCCGAAATAGTGGACAGACTTGTGTTTGTGCCAATAGAATTCTTGTTCAAGAAGGTATTAACAGATGTATACTTCAGTTCTGAAGGATGCTTCTTTTGCTCGTTTAAAAGATGGCTTACTGATATTGGAATCTACGAGAAATTTACAAATGCTTTCTCAAAAGCTGTGCAAAATCTGCAAGTTGGTGATGGGTTTGGTGAAGGTGTAGCTCAGGGTCCTTTAATTAATGAAGCCGCCGTGCAGAAGGTTGAGAAATTTCTTCAAGATGCCACTACAAAGGCACTGGGCCTTCCTTCGATCCTATGCCCAATTATGCTTCATAGTTCATGGCTTTATATCTTTGACCTGGCTCTATTTTACATCAGGGAGGAAGTATTTGGTCCCGTGGCACCCTTACTGCAATTCAGAACAGAGGAGGAAGCAATTGCTCTCGCTAATGACACCAATGCAGGATTAGCTGCTTACATATTCACAAATAATATTCAACGTTCATGGAGAGTGACTGAAGCTCTTGAATACGGAATGGTTGGTGTTAATGAAGGCCTAATTTCTACAGAGTCACCATATGAAACTTTGTCCCTCAAAGAAATTTGGCTTGCCCCCCTCGATGCTTGGCTGAGGAAGTTGGGGATGGTGGTGCTGGGGACCCAATGTCAAATTTCTCTTTTGAGGATCTTTAGGAGGCCAGGGCTTGTTCCTCCTTACCTGTCCAAGGTGGCTCCATTTGGTGGCGTTAAGGAGTCAGGCCTTGGAAGGGAAGGGTCGAAATATGGGATGGACGAGTATCTTGAGCAAGGAACCTGTCCGTCAGGGATTAATGGGCTTGGGCTTATTTTGTTTGGACCCAGCGACCAAAAAAATCCAGATCAGCGAGGCCCATAA | 1932 | 45.13 | MTMTVAARAIAAARSMARSSSFPLKSPSSYVFAAQKSHSHTLLIRQVHNPANGEVITNVPLMGKRETDDAISSAYDAFKSWSKLTAADRSNRLRKWYELLIAHKEEIGQLITLEQGKPLKEAVGETNYGASFIEFYSEEAKRIYGDIISPTMADRRILVLKQPVGVVGVVTPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAILASSQVRKITFTGSTAVGKKLMAGAAGTVKRVSFELGGNAPCIVFDDADVDVAVKGAVNQCLSIQDYGFETILLNMINVISTYHDASISTCKCILPRDVGLFNHDSFLQLQQSSEIVDRLVFVPIEFLFKKVLTDVYFSSEGCFFCSFKRWLTDIGIYEKFTNAFSKAVQNLQVGDGFGEGVAQGPLINEAAVQKVEKFLQDATTKALGLPSILCPIMLHSSWLYIFDLALFYIREEVFGPVAPLLQFRTEEEAIALANDTNAGLAAYIFTNNIQRSWRVTEALEYGMVGVNEGLISTESPYETLSLKEIWLAPLDAWLRKLGMVVLGTQCQISLLRIFRRPGLVPPYLSKVAPFGGVKESGLGREGSKYGMDEYLEQGTCPSGINGLGLILFGPSDQKNPDQRGP | 643 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 33460980 | 33472140 | + | ClCG02G018730.2 | Cla02g01832 | 267958 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01832 | 643 | Pfam | Aldehyde dehydrogenase family | 46 | 300 | IPR015590 | GO:0016491 | |
Cla02g01832 | 643 | Pfam | Aldehyde dehydrogenase family | 378 | 534 | IPR015590 | GO:0016491 | |
Cla02g01832 | 643 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 271 | 278 | IPR029510 | GO:0016491 | |
Cla02g01832 | 643 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 26 | 307 | IPR016162 | GO:0016491 | |
Cla02g01832 | 643 | PANTHER | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL | 587 | 615 | - | - | |
Cla02g01832 | 643 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 362 | 532 | IPR016163 | GO:0016620 | |
Cla02g01832 | 643 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 579 | 622 | IPR016162 | GO:0016491 | |
Cla02g01832 | 643 | CDD | ALDH_F5_SSADH_GabD | 47 | 614 | - | - | |
Cla02g01832 | 643 | PANTHER | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL | 45 | 537 | - | - | |
Cla02g01832 | 643 | PANTHER | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL | 587 | 615 | - | - | |
Cla02g01832 | 643 | PANTHER | SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL | 45 | 537 | - | - | |
Cla02g01832 | 643 | SUPERFAMILY | ALDH-like | 66 | 616 | IPR016161 | GO:0016491 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01832 | Cla-Chr2:33460980 | Cla06g01654 | Cla-Chr6:30056618 | 5.45E-14 | dispersed | |
Cla02g01832 | Cla-Chr2:33460980 | Cla02g01637 | Cla-Chr2:31170876 | 5.95E-13 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01832 | K17761 | - | csv:101217352 | 473.011 |