Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01832 ATGACTATGACGGTCGCTGCAAGAGCAATCGCTGCAGCTCGATCAATGGCGCGATCGAGCAGTTTCCCTCTAAAATCTCCATCTTCTTATGTGTTCGCTGCGCAGAAATCTCACTCCCACACTCTTCTCATTCGTCAGGTTCACAATCCAGCTAATGGTGAAGTTATAACCAATGTCCCGCTCATGGGCAAAAGGGAGACCGATGATGCTATTTCTTCAGCTTATGATGCTTTTAAGTCTTGGAGCAAGCTCACTGCAGCTGATCGGAGTAATCGCTTACGCAAATGGTATGAGCTCCTAATTGCCCACAAAGAAGAGATTGGACAACTGATAACCTTAGAGCAAGGCAAACCCTTAAAGGAAGCTGTGGGTGAGACTAACTATGGAGCCAGCTTTATTGAGTTCTATTCTGAGGAAGCAAAACGGATATATGGTGACATAATTTCACCAACTATGGCCGATCGTCGAATTTTGGTCTTGAAGCAGCCAGTTGGAGTTGTTGGTGTTGTTACCCCTTGGAACTTTCCGTTGGCTATGATTACGCGGAAGGTTGGACCTGCTCTTGCATGTGGTTGTACGGTGGTCATAAAACCCTCTGAGCTTACCCCCTTGACAGCTTTAGCAGCAGCCGAGCTCTCACTTCAAGCTGGAATTCCCCCAGGTGTTGTGAATGTGGTTATGGGAGATGCTCCTGCTATTGGCGATGCTATACTCGCAAGTTCTCAGGTAAGAAAGATCACGTTTACTGGCTCAACAGCAGTTGGAAAAAAGTTGATGGCAGGAGCTGCTGGAACTGTTAAAAGGGTGTCCTTTGAACTTGGTGGTAATGCCCCTTGCATAGTATTTGATGACGCAGATGTGGATGTTGCAGTAAAAGGAGCTGTGAACCAATGCCTGTCTATCCAGGATTATGGCTTTGAAACAATCCTGCTCAACATGATTAATGTAATTAGCACTTACCATGATGCATCAATATCTACTTGTAAGTGCATACTACCTAGGGATGTGGGTCTATTCAACCACGACTCTTTCCTGCAATTGCAGCAAAGTTCCGAAATAGTGGACAGACTTGTGTTTGTGCCAATAGAATTCTTGTTCAAGAAGGTATTAACAGATGTATACTTCAGTTCTGAAGGATGCTTCTTTTGCTCGTTTAAAAGATGGCTTACTGATATTGGAATCTACGAGAAATTTACAAATGCTTTCTCAAAAGCTGTGCAAAATCTGCAAGTTGGTGATGGGTTTGGTGAAGGTGTAGCTCAGGGTCCTTTAATTAATGAAGCCGCCGTGCAGAAGGTTGAGAAATTTCTTCAAGATGCCACTACAAAGGCACTGGGCCTTCCTTCGATCCTATGCCCAATTATGCTTCATAGTTCATGGCTTTATATCTTTGACCTGGCTCTATTTTACATCAGGGAGGAAGTATTTGGTCCCGTGGCACCCTTACTGCAATTCAGAACAGAGGAGGAAGCAATTGCTCTCGCTAATGACACCAATGCAGGATTAGCTGCTTACATATTCACAAATAATATTCAACGTTCATGGAGAGTGACTGAAGCTCTTGAATACGGAATGGTTGGTGTTAATGAAGGCCTAATTTCTACAGAGTCACCATATGAAACTTTGTCCCTCAAAGAAATTTGGCTTGCCCCCCTCGATGCTTGGCTGAGGAAGTTGGGGATGGTGGTGCTGGGGACCCAATGTCAAATTTCTCTTTTGAGGATCTTTAGGAGGCCAGGGCTTGTTCCTCCTTACCTGTCCAAGGTGGCTCCATTTGGTGGCGTTAAGGAGTCAGGCCTTGGAAGGGAAGGGTCGAAATATGGGATGGACGAGTATCTTGAGCAAGGAACCTGTCCGTCAGGGATTAATGGGCTTGGGCTTATTTTGTTTGGACCCAGCGACCAAAAAAATCCAGATCAGCGAGGCCCATAA 1932 45.13 MTMTVAARAIAAARSMARSSSFPLKSPSSYVFAAQKSHSHTLLIRQVHNPANGEVITNVPLMGKRETDDAISSAYDAFKSWSKLTAADRSNRLRKWYELLIAHKEEIGQLITLEQGKPLKEAVGETNYGASFIEFYSEEAKRIYGDIISPTMADRRILVLKQPVGVVGVVTPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAILASSQVRKITFTGSTAVGKKLMAGAAGTVKRVSFELGGNAPCIVFDDADVDVAVKGAVNQCLSIQDYGFETILLNMINVISTYHDASISTCKCILPRDVGLFNHDSFLQLQQSSEIVDRLVFVPIEFLFKKVLTDVYFSSEGCFFCSFKRWLTDIGIYEKFTNAFSKAVQNLQVGDGFGEGVAQGPLINEAAVQKVEKFLQDATTKALGLPSILCPIMLHSSWLYIFDLALFYIREEVFGPVAPLLQFRTEEEAIALANDTNAGLAAYIFTNNIQRSWRVTEALEYGMVGVNEGLISTESPYETLSLKEIWLAPLDAWLRKLGMVVLGTQCQISLLRIFRRPGLVPPYLSKVAPFGGVKESGLGREGSKYGMDEYLEQGTCPSGINGLGLILFGPSDQKNPDQRGP 643
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33460980 33472140 + ClCG02G018730.2 Cla02g01832 267958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01832 643 Pfam Aldehyde dehydrogenase family 46 300 IPR015590 GO:0016491
Cla02g01832 643 Pfam Aldehyde dehydrogenase family 378 534 IPR015590 GO:0016491
Cla02g01832 643 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 271 278 IPR029510 GO:0016491
Cla02g01832 643 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 307 IPR016162 GO:0016491
Cla02g01832 643 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 587 615 - -
Cla02g01832 643 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 362 532 IPR016163 GO:0016620
Cla02g01832 643 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 579 622 IPR016162 GO:0016491
Cla02g01832 643 CDD ALDH_F5_SSADH_GabD 47 614 - -
Cla02g01832 643 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 45 537 - -
Cla02g01832 643 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 587 615 - -
Cla02g01832 643 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 45 537 - -
Cla02g01832 643 SUPERFAMILY ALDH-like 66 616 IPR016161 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01832 Cla-Chr2:33460980 Cla06g01654 Cla-Chr6:30056618 5.45E-14 dispersed
Cla02g01832 Cla-Chr2:33460980 Cla02g01637 Cla-Chr2:31170876 5.95E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01832 K17761 - csv:101217352 473.011