Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01842 ATGCTGAATCTTCCGTTTAGCTCGAGGGTTATGAGGTTAATGGCAATGCCTTCTTGTTCTGCTCTCTTCTTCCTCCTTCATCTTCATTTCGTAATATCGGCTTACGGTATTCAACCAGTCATTACGATTACCTCAAAAAGTCGCGCACCTCCTCCAGCAGCCGCTCTATTGTCGCATAACTTTTACCAACGAACATGCCCAGATGCGGAAGGCATCATTCACCGAAAAGTGCTAGCTTGGATCCAAAAAGATTTTACATTGGCCCCAGCCCTCATTCGCTTGCATTTCCATGATTGTGCTGTTAGGGGATGTGATGCATCGATCCTACTGAACTATCGAAGTAGCGAAAGAAGCGCCTACCCCAGCAGAACCCTAAGAGGTTTCCAAGTGATCGACGATATCAAGGCCGAGCTCGAGAGAAAATGCCCTAAAACCGTCTCCTGCTCCGACATTCTCACCGCCGCCGCCAGAGACGCCACCATTCTCGCCGGAGGTCCCTTCTGGGAGGTTCCATTTGGCCGTAAAGACGGCAGAATCACCATCGCCGCCGAAGCAGAGCGAGTCCCTCAGGGCCACGAAAACGTCACCGCTTTGATCGACTACTTCCGACACCTAGGGCTCGACGTCCTCGATCTAGTCGCCCTCTCCGGCGCCCACACCATTGGCCGAGCCGCCTGCCATAGCTTCCATGATAGGCTCTACAATTTCAACCGGACCGGTAAAGCCGACCCGAATCTGAAACCTCCATTTCTGAATATGCTACGAAAGCATTGCAAGAACGATATGGATCTCGTGTTTCTGGATGCGACAACTCCGAAAATGTTCGATACTGCTTATTTCACGAACCTTCAGAAGAAATTAGGGCTTCTTGTGACGGATCAAGCGCTGTTTTCGGATGAGAGAACTTCTTCGTTTGTGGATTTGATGGCGAATCAGCCGTTTCTTTTCGATAGCCAATTTTCGGCGTCGATGGTGAAATTGGGAAATGTGGGAGTGCTCACCAGGAAAAATGAAGGAGAAATTCGAGTCAATTGCAATTTCGTCAATCCCAGTAGAAGGAAGTAA 1065 49.48 MLNLPFSSRVMRLMAMPSCSALFFLLHLHFVISAYGIQPVITITSKSRAPPPAAALLSHNFYQRTCPDAEGIIHRKVLAWIQKDFTLAPALIRLHFHDCAVRGCDASILLNYRSSERSAYPSRTLRGFQVIDDIKAELERKCPKTVSCSDILTAAARDATILAGGPFWEVPFGRKDGRITIAAEAERVPQGHENVTALIDYFRHLGLDVLDLVALSGAHTIGRAACHSFHDRLYNFNRTGKADPNLKPPFLNMLRKHCKNDMDLVFLDATTPKMFDTAYFTNLQKKLGLLVTDQALFSDERTSSFVDLMANQPFLFDSQFSASMVKLGNVGVLTRKNEGEIRVNCNFVNPSRRK 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33571663 33574787 - ClCG02G018820.1 Cla02g01842 267968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01842 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 211 221 IPR019793 -
Cla02g01842 354 Gene3D - 60 349 - -
Cla02g01842 354 Gene3D Peroxidase, domain 2 189 327 - -
Cla02g01842 354 ProSitePatterns Peroxidases active site signature. 88 99 IPR019794 GO:0004601
Cla02g01842 354 PRINTS Plant peroxidase signature 66 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 PRINTS Plant peroxidase signature 90 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 PRINTS Plant peroxidase signature 126 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 PRINTS Plant peroxidase signature 145 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 PRINTS Plant peroxidase signature 164 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 PRINTS Plant peroxidase signature 210 222 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 PRINTS Plant peroxidase signature 266 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 PRINTS Plant peroxidase signature 282 299 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 PRINTS Plant peroxidase signature 322 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 ProSiteProfiles Plant heme peroxidase family profile. 56 349 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 Pfam Peroxidase 76 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 CDD secretory_peroxidase 57 348 IPR033905 GO:0004601|GO:0042744
Cla02g01842 354 PRINTS Haem peroxidase superfamily signature 88 102 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 PRINTS Haem peroxidase superfamily signature 146 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 PRINTS Haem peroxidase superfamily signature 164 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 PRINTS Haem peroxidase superfamily signature 211 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 PRINTS Haem peroxidase superfamily signature 268 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 PANTHER PEROXIDASE 25-RELATED 40 348 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01842 354 PANTHER PEROXIDASE 40 348 - -
Cla02g01842 354 SUPERFAMILY Heme-dependent peroxidases 57 350 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01842 Cla-Chr2:33571663 Cla03g00385 Cla-Chr3:4437906 1.58E-134 dispersed
Cla02g01842 Cla-Chr2:33571663 Cla01g01632 Cla-Chr1:31121716 1.06E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01842 K00430 - csv:101204209 597.816