Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla02g01847 | ATGTCATCGTCATGGTGGAGCTCCGCCACCGCCGTCCCTTTTCCATCTCAGTCACCGCTAATTACTCATCCTTGCCATCACCAACACCACTCTCACATTCGTCTCAGAAAATTAAGTCCTTCTCCATCAATTTTCACCGCTCCGAGAGCTATATTGCTTGACGAAATCGTTCAACTCACCCACAACAAGGTTTTAGTTGCCGCCGCTGTGTCCGCTGCGATTGGGCAACTCGCGAAGCCTTTCACGTCTGTTGTTTTCTATGGCAGAGAGTTTAACTTCAGAACTGCCTTTGAGGCTGGAGGCTTCCCTTCAACCCATTCCTCTGCGGTGGTCGCTGCTGCTACAATCGTCGGCGCTGAGAGGGGTCTTGCCGATTCCATTTTTGGCATAACTGTAGTTTACGCGTCCCTTATTATGTACGATGCTCAGGCAAGATTCCCTTGGTTGCCGTTGCCGTCCTTCAAGTCAAGGGCTTTGGGGAAAGGTAGAGAAAGTTGGAGAAAGTTGTTTTTGGCCATAATTTGGACACCAACTTCTCAATTATTGTTAATCTACCTAGGTGTTATCTTAATCAGTTACCCTCTGGTCCTCAGTGGGTCAGAGGTTGTCAGTCGTTTACAGTTTGCTAATGATACTTTTGTATTTTCCTTTTATGATCGCTCCAAACTGAGGAATGGAGTCAGGAGAGAAGTTGGAAAACATGCTAAAGCCATCAACAAGCTATTACAAACAGAGACACCAGTGAACTCATCATTTCCCTATAAAGATCAAGATCTTCAAGTTGATTCCCAACTCGAAAAGAGAGTATCATCGTCGCTCAATAGAAATCTCGAGATTGGCAGTCCCATACTATCTGAGGAATCAACCAAGGCCCTAACGGTACCGAGTCCAGTAAAGCAGGATGTCGCATCCTCAAGCCGAGCGAATGATTTGGAAGAAGGATCAAGAATGGAGGCTAGTCGTTGGAAGCCATTTAAAGAGTCAATAGGCCATACTGAGATTGAAGTTGCAGCTGGTGCTTTGTTGGGCTTCACGGTTAGTCTGATTACCAATTCATTGTTGTGA | 1065 | 45.92 | MSSSWWSSATAVPFPSQSPLITHPCHHQHHSHIRLRKLSPSPSIFTAPRAILLDEIVQLTHNKVLVAAAVSAAIGQLAKPFTSVVFYGREFNFRTAFEAGGFPSTHSSAVVAAATIVGAERGLADSIFGITVVYASLIMYDAQARFPWLPLPSFKSRALGKGRESWRKLFLAIIWTPTSQLLLIYLGVILISYPLVLSGSEVVSRLQFANDTFVFSFYDRSKLRNGVRREVGKHAKAINKLLQTETPVNSSFPYKDQDLQVDSQLEKRVSSSLNRNLEIGSPILSEESTKALTVPSPVKQDVASSSRANDLEEGSRMEASRWKPFKESIGHTEIEVAAGALLGFTVSLITNSLL | 354 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 33624199 | 33628129 | + | ClCG02G018880.2 | Cla02g01847 | 267973 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla02g01847 | 354 | MobiDBLite | consensus disorder prediction | 295 | 310 | - | - | |
| Cla02g01847 | 354 | PANTHER | ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN | 24 | 143 | - | - | |
| Cla02g01847 | 354 | PANTHER | ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN | 225 | 353 | - | - | |
| Cla02g01847 | 354 | PANTHER | ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN | 24 | 143 | IPR003832 | - | |
| Cla02g01847 | 354 | PANTHER | ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN | 225 | 353 | IPR003832 | - | |
| Cla02g01847 | 354 | Pfam | Divergent PAP2 family | 226 | 346 | IPR003832 | - | |
| Cla02g01847 | 354 | Pfam | Divergent PAP2 family | 61 | 143 | IPR003832 | - | |
| Cla02g01847 | 354 | MobiDBLite | consensus disorder prediction | 295 | 319 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla02g01847 | Cla-Chr2:33624199 | Cla11g01360 | Cla-Chr11:27099022 | 1.42E-08 | dispersed | |
| Cla02g01847 | Cla-Chr2:33624199 | Cla05g00094 | Cla-Chr5:900845 | 1.56E-06 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla02g01847 | - | - | bhj:120088431 | 295.434 |