Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01848 | ATGATACTACACTCACAAGCGTCCTCTGTTTTCACAATTTCCTCTACAGTTACCGATAATCACACGTATAAGTATCACCGGCGGCAACTTCAGCTTCCTGTTTACGGCGGTGGAGCGAGTTTTCATGTTCGTGTTTCTAAAATTTTACTTCCGACGGCTGCGGTCACGGCCGGTTCCAGCGGCGGAAGTCTGACTAGAAGGAAATATAGGAATCGTGTTAACGACTTTAGGTCTTCTGCAAGTGCCTCCAATTTGTCCTCCTCGACTCAGCCACCGGATATTCCAACTCCAGGTTCAGGTCCAGATAAGAATGAGGAAGCTCAGAGGCCCGGACCTGATCTGAAAATGCTTCTGAAGAGGTTTTGGAAAGTTGCCGCACCTTATTGGTCCTCGGACGATAAAGTGCAAGCTCGATGGCAGCTGGCTGCTGTCTTCGCTCTGTCCTTGGGCACCACCGGCATCAGCGTTGGCTTCAATTTCCTTGGCCGTGACTTCTACAACGCTCTTGCTAACAAGGACCAAGAACAGTTCACTAAGCAACTCCTCTACTACCTAGGTGCCTTCGCTGGAGGTATTCCGGTTTTTGTATTGAGAGATTATGCAAAGGACATGCTTTCCCTTAGATGGAGGTCATGGATGACTAAACATTACATGGAGCGTTATCTAAAGGACCAGTCTTTCTATAAAATTCAGTCCCAGTCCATTATTGATAATCCAGACCAGCGGATCGTTGATGATCTCAGTTCTTTCACAGGGACAGCTCTTTCATTTTCTTTGGCACTTTTCAATTCTACCGTGGATTTAATTTCATTTAGTAACATCTTATATGGTATCTATCCACCGTTGTTTGTTGTTCTTCTTTTATATTCGATTGGAGGAACGGCAATCAGTGTTTTCCTCGGAAAGGGTTTGGTTAATCTGAACTTCTTGCAAGAAAAGAAAGAAGCAGATTTTCGCTATGGACTTGTCCGCATTCGTGAAAATGCTGAATCAATTGCTTTCTATGGTGGTGAAGAAAATGAGATGCAGCTTATTCTGCAACGGTTTAGAAGTGCTGTTGAGAATTTAACTAAATTACTAATAGCATCCAGAAATCTTGAGTTCTTTACCAATGGCTATCGCTACCTCATTCAGATTCTTCCAGCTGCTGTTGTTGCCCCAATGTACTTTTCAGGAAAAATTGAGTTTGGTGTTATTAATCAATCAGTATCTGCTTTCAATCACATCCTTGGGGATTTTTCCCTCATTGTATATCAGTTTCAGGCCATCAGTGCTTTTTCAGCAATTATTGATCGCCTAGGTGAATTTGATGACCTCTTGGATGGCAGTGCCCCTAATGTTCTCTCTAACACCTCAGAAGAGATACATCTCATGTACTCCCATGTGGAAAGTTCACCTCTACTAGAATCAAATGGGTCCATGGCCCTAGACAAACGCCTGAAATTATTGGAGATAGAGAATATGACTTTAGAGGCACCAAATGGAGCTACTTTGGTGAGAGACTTGGCGTTAATAGTTAAAGAAAAGGAGCATTTACTGGTAATGGGACCCAGTGGATGTGGCAAGACCTCATTGTTAAGAGTTTTGGCAGGTCTTTGGAATGTTGGAAAAGGAAAAATCACGTTTTATATAAAAGACTATCCGGAGCAGTTAGTTTCTCAAAATGGATTGCAAACCGAAGCACATACAGGAGAAGATGTATCCAAAGAAAATAGTAGACCACTCAACAAGAATTATCGAGGGATATTTTTCCTTCCTCAAAGACCATATATGGTTCTGGGTACACTACGTCAGCAGCTGCTTTATCCTACATGGGCTGAAGGTTCTGTCACATCAGCAGGTCATGCTGAACCAAATGTATTCCCTTCCTTTTTGACAGGTGCGTCGAATATCAACAAGGTTGGCGAAAATCCTGATAAGCCAACAACGGATGACCTAATCAAGGTTCTGGATAAAGTGGGTCTTGACTACCTATTGACTCGTTTCAGTAGTCTGGACACGACTTGTGAATGGTCCAGTGTTCTTTCTCTCGGTGAGCAACAACGTATTGCTTTTGCACGTCTATTACTTTCAAGGCCAAAGTTAGTCCTGCTGGATGAGTCTACTAGTGCGTTAGACGAAGCGAATGAGGCACGTTTATACAAGCAAATCGCAGGTGCTGGAATTACATATATTAGCATTGGCCATCGACGAACTTTACGTAATCACCATAACAGTATTTTGCACATATCCAAGTTGTCTGATGGCAATCAACGCAATTGGAACATTGAACCCATTATTCGGGATGATTTGTACGAATTATTAAAGCAGTAA | 2313 | 42.63 | MILHSQASSVFTISSTVTDNHTYKYHRRQLQLPVYGGGASFHVRVSKILLPTAAVTAGSSGGSLTRRKYRNRVNDFRSSASASNLSSSTQPPDIPTPGSGPDKNEEAQRPGPDLKMLLKRFWKVAAPYWSSDDKVQARWQLAAVFALSLGTTGISVGFNFLGRDFYNALANKDQEQFTKQLLYYLGAFAGGIPVFVLRDYAKDMLSLRWRSWMTKHYMERYLKDQSFYKIQSQSIIDNPDQRIVDDLSSFTGTALSFSLALFNSTVDLISFSNILYGIYPPLFVVLLLYSIGGTAISVFLGKGLVNLNFLQEKKEADFRYGLVRIRENAESIAFYGGEENEMQLILQRFRSAVENLTKLLIASRNLEFFTNGYRYLIQILPAAVVAPMYFSGKIEFGVINQSVSAFNHILGDFSLIVYQFQAISAFSAIIDRLGEFDDLLDGSAPNVLSNTSEEIHLMYSHVESSPLLESNGSMALDKRLKLLEIENMTLEAPNGATLVRDLALIVKEKEHLLVMGPSGCGKTSLLRVLAGLWNVGKGKITFYIKDYPEQLVSQNGLQTEAHTGEDVSKENSRPLNKNYRGIFFLPQRPYMVLGTLRQQLLYPTWAEGSVTSAGHAEPNVFPSFLTGASNINKVGENPDKPTTDDLIKVLDKVGLDYLLTRFSSLDTTCEWSSVLSLGEQQRIAFARLLLSRPKLVLLDESTSALDEANEARLYKQIAGAGITYISIGHRRTLRNHHNSILHISKLSDGNQRNWNIEPIIRDDLYELLKQ | 770 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 33629903 | 33637777 | + | ClCG02G018890.1 | Cla02g01848 | 267974 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01848 | 770 | SMART | AAA_5 | 508 | 747 | IPR003593 | - | |
Cla02g01848 | 770 | Pfam | ABC transporter transmembrane region 2 | 133 | 390 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Cla02g01848 | 770 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 483 | 768 | IPR003439 | GO:0005524 | |
Cla02g01848 | 770 | Pfam | ABC transporter | 500 | 703 | IPR003439 | GO:0005524 | |
Cla02g01848 | 770 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 142 | 425 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Cla02g01848 | 770 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY D MEMBER 3 | 103 | 759 | - | - | |
Cla02g01848 | 770 | Gene3D | ABC transporter type 1, transmembrane domain | 102 | 439 | IPR036640 | GO:0005524|GO:0016021 | |
Cla02g01848 | 770 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 482 | 744 | IPR027417 | - | |
Cla02g01848 | 770 | ProSitePatterns | ABC transporters family signature. | 675 | 689 | IPR017871 | GO:0005524 | |
Cla02g01848 | 770 | SUPERFAMILY | ABC transporter transmembrane region | 119 | 436 | IPR036640 | GO:0005524|GO:0016021 | |
Cla02g01848 | 770 | Gene3D | - | 475 | 753 | IPR027417 | - | |
Cla02g01848 | 770 | MobiDBLite | consensus disorder prediction | 80 | 110 | - | - | |
Cla02g01848 | 770 | CDD | ABCD_peroxisomal_ALDP | 483 | 751 | - | - | |
Cla02g01848 | 770 | PANTHER | ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER | 103 | 759 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01848 | Cla-Chr2:33629903 | Cla10g00838 | Cla-Chr10:19234100 | 5.65E-46 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01848 | - | - | bhj:120087605 | 1425.22 |