Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01859 ATGGATCTCCTCCTCCTGGAGAAGACTCTTATCGGCCTCTTCCTCGCCATCGTTCTCGCCATCGCCATTTCCAAGCTTCGCGGCAAGCGTTTCAAGCTTCCGCCAGGTCCTTTGCCGGTGCCGATCTTCGGAAACTGGCTCCAGGTCGGCGATGACTTGAACCACCGCAATCTCACAGATCTCGCCAAGAAATACGGCGATATTTTCTTGCTTCGTATGGGACAGAGGAACCTCGTCGTTGTTTCCTCGCCGGAATTAGCCAAGGAAGTGCTCCACACGCAGGGAGTCGAGTTCGGATCTCGAACCAGAAACGTCGTCTTCGATATCTTCACCGGTAAAGGTCAGGATATGGTTTTCACCGTCTATGGCGAACACTGGAGGAAAATGAGACGGATCATGACGGTTCCATTTTTCACCAACAAAGTAGTCCAGCAATACCGTCAGGGATGGGAGGACGAAGCTCAAAGTGTGGTGGATGATGTGAAGAAGAATCCAGAGTCGGCGACCACCGGAGTCGTTCTCCGACGGCGGTTGCAGCTTATGATGTACAATAACATGTACAGGATTATGTTCGATAGAAGATTCGAGAGTGAAGATGATCCTCTGTTTCTCAAACTTAGGGCTCTGAACGGAGAGAGAAGCCGATTGGCGCAAAGCTTCGATTATAACTATGGCGATTTCATCCCGATCTTAAGGCCGTTCTTGAGAGGATATCTCAAAATCTGCAAGGAAGTTAAGGAAACGAGGCTGAAACTCTTCAAGGATTACTTCGTCGAGGAGCGGAAGAAACTGGCGAACACGAAGAGCACGACCAACGAGGGATTGAAATGTGCGATTGATCATATATTGGATGCACAACAGAAGGGAGAAATCAACGAAGACAATGTACTTTACATTGTTGAGAATATCAATGTGGCAGCAATTGAAACAACATTATGGTCAATTGAATGGGGAATTGCCGAGCTAGTGAACCACCCAGAAATCCAAAGAAAGTTGAGGAATGAACTCGACACTGTCCTTGGACCTGGTGTTCCAATCACCGAGCCAGACACTCACAAGCTCCCTTACCTCCAAGCCGTGGTCAAGGAGACTCTCCGCCTTCGCATGGCCATCCCTTTACTCGTCCCCCACATGAACCTCCATGACGCCAAGCTCGGTGGCTACGACATTCCAGCCGAGAGCAAGATCCTCGTCAATGCCTGGTGGCTCGCCAACAACCCAGCCAACTGGAAGAACCCCGAAGAATTCCGCCCCGAGAGGTTCTTGGAAGAGGAATCCAAGGTTGAAGCCAATGGCAATGATTTCAGATACTTGCCTTTCGGCGTCGGCCGGAGGAGCTGTCCTGGGATCATCTTGGCTTTGCCTATCCTTGGCATTACAATTGGGCGTTTGGTTCAGAACTTTGAGCTGCTTCCTCCTCCTGGACAGTCTAAGTTGGATACTTCAGAGAAAGGTGGGCAATTCAGCTTGCATATTTTGAAGCACTCCACCATTGTTGCTAAGCCAAGAGTGTTCTAA 1518 49.67 MDLLLLEKTLIGLFLAIVLAIAISKLRGKRFKLPPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKYGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRQGWEDEAQSVVDDVKKNPESATTGVVLRRRLQLMMYNNMYRIMFDRRFESEDDPLFLKLRALNGERSRLAQSFDYNYGDFIPILRPFLRGYLKICKEVKETRLKLFKDYFVEERKKLANTKSTTNEGLKCAIDHILDAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQRKLRNELDTVLGPGVPITEPDTHKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPANWKNPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKLDTSEKGGQFSLHILKHSTIVAKPRVF 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33759526 33763418 + ClCG02G019010.1 Cla02g01859 267985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01859 505 Pfam Cytochrome P450 34 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g01859 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Cla02g01859 505 Gene3D Cytochrome P450 23 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g01859 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 505 - -
Cla02g01859 505 SUPERFAMILY Cytochrome P450 34 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g01859 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g01859 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g01859 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g01859 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g01859 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g01859 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g01859 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g01859 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g01859 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g01859 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g01859 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g01859 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla02g01859 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 505 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla02g01859 Cla03g00006 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01859 Cla-Chr2:33759526 Cla03g00006 Cla-Chr3:111206 0 dispersed
Cla02g01859 Cla-Chr2:33759526 Cla08g00822 Cla-Chr8:20641581 1.63E-72 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01859 K00487 - csv:101221846 976.852