Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01864 ATGTTAAAGAATACTCGAGATAGGAACCCCAGCAGCAACCTCCGTGATAGCAGCTCGGAATTTGGGTATGTTGAGACCGATCCGACATGTCGTTACGGCCGTTTTGACGAAGTCTTGGGAAAAGGGGCCATGAAGACAGTGTACAAAGCCATTGATGAGTTTCTTGGAATAGAGGTGGCGTGGAGTCAGGTGAAACTCAATGAGGTCCTCCGATCGCCCGAGGATTTGCAGCGGCTGTATTCAGAGGTTCATCTACTTAGCACACTTAAGCATGAATCGATCATGCGATTCTACACCTCTTGGATCGACGTTGATCGCAAAACCTTCAACTTCATTACTGAACTGTTTACTTCTGGAACGCTCAGAGAATACGGAAAGAAATATAGGCGAATCGATATCAGAGCCATTAAGAGCTGGGCACGCCAGATTCTGCAGGGGCTCATTTATTTGCACGAACACGATCCCCCAATAATACACAGAGATCTGAAGTGTGATAATATCTTTGTGAATGGCCATCTTGGGCAAGTCAAGATTGGTGACTTGGGGCTTGCAGCTATACTTCATGGTTCCAGATCTGCCCACAGTGTTATAGGCACACCGGAGTTTATGGCGCCGGAACTATACGAGGAGAATTACAACGAACTAGTTGATGTCTACTCGTTTGGCATGTGTGTTCTAGAGATGCTTACTTCTGAGTACCCATATAGCGAGTGTTCTAATCCTGCACAGATTTACAAGAAAGTCACGTCGGGAAAGCTGCCAGCAGCATTGTACAAGATTCAAGATATGGATGCGCAGAGATTTGTTAAGAAATGCTTGTTACCAGTTTCGATGAGGGCGTCTGCAAAGGAACTCTTGTCCGATCATTTTCTCAAAGTTGATGGAGATAAACCTTCTTCGAAGGAGAGGACTCCAAACCAGAAGCCATTTCTAAATGCCAAAGAGATGGAGAAATTGCACTTGGGTGAAGGTTTAAGCAGGACCAACATGACGATCACGGGGAAGCTGAACCCCGAAGACAATACCCTCTTTCTCAGAGTTCAGATTGCCGATAAAGAAGGCTCTCTTAGGAACATATACTTCCCCTTCGACATAGTTAACGACACAGCATTAGATGTGGCAATGGAGATGGTGAAAGAGTTGGAGATATCTGATTGGGAACCGTTCGAAATAGCGGACATGATTGAAGGAGAGATATCGGCTCTAGTTCCGAACTGGAATAGAAGTGAGTTATCCAACCATAACCTCAGCTTTAGCTATGCAGAAGAAGATGATAATTCATCTCATCATACTTTTCGCTCAGTCTCCTCATCGTCCCAAGCAACAACTTTGGGTCTTATCACCTCCCCTAGAACAAACCAAAACATTTCAAATGGTTTTAGTTGGTTCCCAGCATCAAACTCGTATAGTTTACCTTACATGATTGACACGACACCACAACCTCTATTTGCAGACGATGTGCTTGATGATAGCAGTTCACAGTGCTCATCGGCGTCGGGAAAATATTCCAACTTGAATTACATCAGCAGCGACGAGAACGAGACCAGTATGAGTTCGGTCCAGATAGATCAACATACCAACATCAATAAGATTCACAATTCCTCAAGATTTTGTCCTGTTGAGAACCGGAAGAGCAAGGATTTCTTGGGTGGACTTCTATACAAGCAGAGCCAATGTGCAATAGCAGGGTTGTCTCAAGGAGTTGCCTCGAGGGGAAGGGATGGTTGTAAATTAACAAGGAACAGATCACTAGTAGATGTACATAGCCAATTGCTGCATCGTTCGTTGGTGGAGGAGGTGAATAGAAGACGATTATTCAAGACGGTTGGAGCAGTGGAAAGCATCGGATTTCAAGCACCTTGTGAGGTTTCTTCCAGCAAAAGAGGCTCGAGTAGGCAACCGATCGGGAACCGAAGTAGCGATGTAGTGAGAACAAGGAGAAACAGCGATATTAGGTGGCAAGATGTTGGAAGGAGAACATGA 1983 44.93 MLKNTRDRNPSSNLRDSSSEFGYVETDPTCRYGRFDEVLGKGAMKTVYKAIDEFLGIEVAWSQVKLNEVLRSPEDLQRLYSEVHLLSTLKHESIMRFYTSWIDVDRKTFNFITELFTSGTLREYGKKYRRIDIRAIKSWARQILQGLIYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSRSAHSVIGTPEFMAPELYEENYNELVDVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPAALYKIQDMDAQRFVKKCLLPVSMRASAKELLSDHFLKVDGDKPSSKERTPNQKPFLNAKEMEKLHLGEGLSRTNMTITGKLNPEDNTLFLRVQIADKEGSLRNIYFPFDIVNDTALDVAMEMVKELEISDWEPFEIADMIEGEISALVPNWNRSELSNHNLSFSYAEEDDNSSHHTFRSVSSSSQATTLGLITSPRTNQNISNGFSWFPASNSYSLPYMIDTTPQPLFADDVLDDSSSQCSSASGKYSNLNYISSDENETSMSSVQIDQHTNINKIHNSSRFCPVENRKSKDFLGGLLYKQSQCAIAGLSQGVASRGRDGCKLTRNRSLVDVHSQLLHRSLVEEVNRRRLFKTVGAVESIGFQAPCEVSSSKRGSSRQPIGNRSSDVVRTRRNSDIRWQDVGRRT 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33833122 33837011 + ClCG02G019090.2 Cla02g01864 267990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01864 660 Pfam Protein kinase domain 36 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01864 660 ProSiteProfiles Protein kinase domain profile. 33 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01864 660 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 643 - -
Cla02g01864 660 MobiDBLite consensus disorder prediction 623 646 - -
Cla02g01864 660 MobiDBLite consensus disorder prediction 1 20 - -
Cla02g01864 660 SMART serkin_6 33 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01864 660 CDD STKc_WNK 31 291 - -
Cla02g01864 660 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK4-RELATED 13 643 - -
Cla02g01864 660 Gene3D Phosphorylase Kinase; domain 1 17 114 - -
Cla02g01864 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Cla02g01864 660 SUPERFAMILY Protein kinase-like (PK-like) 35 455 IPR011009 -
Cla02g01864 660 Gene3D Transferase(Phosphotransferase) domain 1 116 296 - -
Cla02g01864 660 MobiDBLite consensus disorder prediction 623 642 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01615 Cla-Chr2:30873725 Cla02g01864 Cla-Chr2:33833122 9.36E-157 dispersed
Cla02g01864 Cla-Chr2:33833122 Cla04g00650 Cla-Chr4:20944269 0 dispersed
Cla02g01864 Cla-Chr2:33833122 Cla06g00582 Cla-Chr6:7111152 1.71E-164 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80368 PF00069 Pkinase 3.50E-46 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01864 K08867 - csv:101203757 1160.59