Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01867 ATGCCGGAGATCGAACCATCTTCCCCCGACAACAACGCCCTTTTCGGCAAATATGAGCTCGGCAAGCTCCTCGGCTGCGGCGCCTTTGCCAAGGTCTACCATGCCCGCGACCTTCGCTCCGGCCAAAGCGTCGCCGTCAAGGTTATCAACAAGAAGAAAATCTACGGCACAACCTTAATGTTCAACATCAAGCGGGAAATCGCCATTATGCGACGTCTCCGCCATCCAAACATCGTTAAACTCCACGAGGTTCTCGCTACCAAATCGAAGATCTACTTCGTCATGGAGTTCGTCAAAGGCGGCGAGCTTTTCGCTAAGATCGCCAAGGGCAGATTCAGTGAGGATCTCAGCCGGAAATTCTTCCAGCAGTTGATCTCCGCCGTTGGATTCTGTCACACGCGTGGAATCTACCATCGCGATCTGAAGCCGGAGAATCTTCTCGTCGATGAGAATGGAAATCTGAAGGTCTCTGACTTTGGTCTCAGTGCCGTAACGGAACAGATCCGCGCCGATGGCCTTTTACACACTCTTTGTGGAACTCCGGCGTATGTCGCGCCGGAGATTTTGTCGAAAAAGGGCTACGACGGTGCGAAAGTTGATGTGTGGTCATGTGGTGTGATTCTTTTCGTGTTGAACGCCGGTTACCTTCCGTTCAACGATCCGAATCTCATGGCGATGTATAAGAAGATTTACAAGGGGGAATACCGGTGCCCTAAATGGATGTCGCCGGATCTCAAGAGATTTCTGTCGCGACTTCTCGATACGAATCCCGAAACGAGGATAACCATTGAAGAGATTCTAAGTGATCCATGGTTCAGAAAGGGGGGAAATACAGAGATCAATTTCTACGATGATTACGAGATGAAATCGGAAGAGAAGGACGAATCATCGTCGACGAATTTGAACGCATTCGACATTATATCTTTCTCCTCAGGATTGGATCTCTCTGGTTTATTCGACAATTCACATAACGCAGTGGACGACAGTGAGCGATTCATATCGGCAGAATCGCCGGAGAAGATCGTGGAAAAACTTGAGGAATTTGCTAGGGCTGAGAATCTGAAGGTGAAGAAACATAAAGAGTTTGGAGTTGAATTGGATGCGCAGAGTCGTAATTTGGTCGTCGGAATTGAAATTTTCGGATTAACCGATGGATTGGTGGTGGTGGAGGTGCGAAGAAAATGCGGAGATTCAGAATCGTTTAAGCAAATGTTGAAGAAGAAGCTGAAAGGTCATCTCACCGGCAATGAAGCGTCGACGTCGACGTCCCGATAA 1275 48.55 MPEIEPSSPDNNALFGKYELGKLLGCGAFAKVYHARDLRSGQSVAVKVINKKKIYGTTLMFNIKREIAIMRRLRHPNIVKLHEVLATKSKIYFVMEFVKGGELFAKIAKGRFSEDLSRKFFQQLISAVGFCHTRGIYHRDLKPENLLVDENGNLKVSDFGLSAVTEQIRADGLLHTLCGTPAYVAPEILSKKGYDGAKVDVWSCGVILFVLNAGYLPFNDPNLMAMYKKIYKGEYRCPKWMSPDLKRFLSRLLDTNPETRITIEEILSDPWFRKGGNTEINFYDDYEMKSEEKDESSSTNLNAFDIISFSSGLDLSGLFDNSHNAVDDSERFISAESPEKIVEKLEEFARAENLKVKKHKEFGVELDAQSRNLVVGIEIFGLTDGLVVVEVRRKCGDSESFKQMLKKKLKGHLTGNEASTSTSR 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33855379 33856653 + ClCG02G019120.1 Cla02g01867 267993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01867 424 Gene3D Kinase associated domain 1, KA1 297 415 - -
Cla02g01867 424 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01867 424 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01867 424 Pfam NAF domain 299 358 IPR004041 GO:0007165
Cla02g01867 424 Gene3D Transferase(Phosphotransferase) domain 1 100 278 - -
Cla02g01867 424 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01867 424 CDD CIPK_C 302 413 - -
Cla02g01867 424 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Cla02g01867 424 ProSiteProfiles NAF domain profile. 296 320 IPR018451 GO:0007165
Cla02g01867 424 Gene3D Phosphorylase Kinase; domain 1 5 99 - -
Cla02g01867 424 SUPERFAMILY Protein kinase-like (PK-like) 15 280 IPR011009 -
Cla02g01867 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Cla02g01867 424 PANTHER - 7 419 - -
Cla02g01867 424 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 7 419 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01867 Cla-Chr2:33855379 Cla04g00654 Cla-Chr4:21052121 0 dispersed
Cla05g00494 Cla-Chr5:4499662 Cla02g01867 Cla-Chr2:33855379 7.61E-125 dispersed
Cla06g00622 Cla-Chr6:7606407 Cla02g01867 Cla-Chr2:33855379 1.10E-132 dispersed
Cla02g01867 Cla-Chr2:33855379 Cla02g01868 Cla-Chr2:33859354 7.38E-142 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80369 PF00069 Pkinase 1.70E-72 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01867 - K12761 csv:101204001 753.436