Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01868 | ATTTTTGAAATTAAAGCCAAACCTTCAATCTTAATCCTCTCCATTAATCCTCGATCCCGAGATTTTTCCGATTCTAAGCCAACTGATTTTCTCATTCTGAGAGCCGACTTTTCGCTTAACCAAAACGCCAGGGGGCTGAAGGCTGGGCTGTGGTGGTTGATCTCCATTAAAGAGAAACCAGGTGGTGCTCCAAATCTCTGTGTCATAAATCAGGAATCCCCACCTTCTCTCTGCTTTAAAACGCTCGATTTACCTGCAAGTTATTGTGGAATTGGGATGGAGAATAAGGCAAGTGTGATGGTTCAACGATATGAATTAGGGAGATTGCTTGGCCAAGGAACCTTCGCAAAGGTGTATTATGCGAGGAATACAGGAAACAATCAAAGTGTGGCCATTAAGGTGATTGATAAAGAAAAGATTACGAAGGCTTCGCTAATCGATCAGATTAAGCGTGAAATATCGATTATGAGACTAGTTAGACATCCTAATATTCTACGTCTGTATGAGGTTATGGCCACCAAGACTAAGATCTACTTTGTTTTGGAATATGCTAAAGGTGGTGAGCTCTTTGACAAAGTTGCTAAAGGGAGGCTGCAGGAGGACATTGCTTGGAAATACTTTTATCAGTTAATTAATGCTGTTGATTTTTGTCACAGCAGGGGAGTGTATCACCGTGATATAAAGCCGGAGAACCTACTGCTTGATGAAAATGAGAATCTTAAGGTATCTGATTTTGGTTTAAGTGCTTTAGCTGAGTCCAAGCGTCAAGACGGGTTGCTTCACACGACTTGTGGTACACCAGCTTATGTTGCCCCTGAAGTCATCAATAGGAAGGGCTATGATGGTGCAAAAGCTGATATCTGGTCTTGTGGAGTAGTTTTGTTTGTCCTATTGGCAGGTTATCTCCCATTCCACAATTCGAATTTGATGGAGATGTATCGGAAGATTGGAAAAGCAGAGTATAAATGCCCTAGTTGGTTCCCTCGTGAAGTGCGGCGGTTGCTAAGCAGGATGCTTGATCCAGACCCCATTGCTAGGACTTCAATAGCAATGATAAGACAAAGTTCTTGGTTCAAAAAGGGATTGAGGTCTAAGAATCTAAGAAGTGGAATAGAAAGCAATGCTGTAGCGTCTGAAGATGCAGCAGCTGTTTCTGGACCGTCCGAGAGAAGTGTGCCAGCAGAAGGAAATCAAGAGCCAGATAGACCTCCAACTTTGAATGCTTTCGATATCATCTCCCTTTCCGCGGGGTTCAATTTATCCAGTTTATTTGAAGACAATTCAAAGAAGAAAGAAACATTGTTTACTTGTAGAAAACCAGCCTCTGTTATTCTCTCAAAACTAGAAGAAATGGCTAAACTTCTTAGGTTTCGAGTACAGAAGAAAGAAGCAGGCCTATTGAAATTTGAGGCACTAACAGAGGGAAGAAAGGGGGTATTATCCATTGATACAGAGATCTTCGAGGTTACTCCATCTTTTTATTTGGTGGAAATGAAAAAATCAAACGGAGACACATTGGAATATCAGAAAATATTGAAAGAGGACATAAGGCCAGCTCTACAGGATATTGTATGGGTTTGGCGAGGAGAGCAGGAGCAGCAGCAACAAAATCCTCAGCCTCAGCCTCAGCCTCTTCAACCGCAGGATCGGGTTCGAGATCCTTATACAGAGCAAGAGGGTGCATCACAACCGCAGTAG | 1698 | 42.4 | IFEIKAKPSILILSINPRSRDFSDSKPTDFLILRADFSLNQNARGLKAGLWWLISIKEKPGGAPNLCVINQESPPSLCFKTLDLPASYCGIGMENKASVMVQRYELGRLLGQGTFAKVYYARNTGNNQSVAIKVIDKEKITKASLIDQIKREISIMRLVRHPNILRLYEVMATKTKIYFVLEYAKGGELFDKVAKGRLQEDIAWKYFYQLINAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVVLFVLLAGYLPFHNSNLMEMYRKIGKAEYKCPSWFPREVRRLLSRMLDPDPIARTSIAMIRQSSWFKKGLRSKNLRSGIESNAVASEDAAAVSGPSERSVPAEGNQEPDRPPTLNAFDIISLSAGFNLSSLFEDNSKKKETLFTCRKPASVILSKLEEMAKLLRFRVQKKEAGLLKFEALTEGRKGVLSIDTEIFEVTPSFYLVEMKKSNGDTLEYQKILKEDIRPALQDIVWVWRGEQEQQQQNPQPQPQPLQPQDRVRDPYTEQEGASQPQ | 565 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 33859354 | 33861699 | - | ClCG02G019130.1 | Cla02g01868 | 267994 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01868 | 565 | PANTHER | - | 94 | 540 | - | - | |
Cla02g01868 | 565 | MobiDBLite | consensus disorder prediction | 530 | 565 | - | - | |
Cla02g01868 | 565 | Pfam | Protein kinase domain | 104 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01868 | 565 | Pfam | NAF domain | 403 | 461 | IPR004041 | GO:0007165 | |
Cla02g01868 | 565 | ProSiteProfiles | Protein kinase domain profile. | 104 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01868 | 565 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 | 94 | 540 | - | - | |
Cla02g01868 | 565 | CDD | CIPK_C | 407 | 521 | - | - | |
Cla02g01868 | 565 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 222 | 234 | IPR008271 | GO:0004672|GO:0006468 | |
Cla02g01868 | 565 | ProSiteProfiles | NAF domain profile. | 401 | 425 | IPR018451 | GO:0007165 | |
Cla02g01868 | 565 | SMART | serkin_6 | 104 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g01868 | 565 | CDD | STKc_SnRK3 | 103 | 357 | - | - | |
Cla02g01868 | 565 | SUPERFAMILY | Protein kinase-like (PK-like) | 101 | 359 | IPR011009 | - | |
Cla02g01868 | 565 | Gene3D | Kinase associated domain 1, KA1 | 401 | 526 | - | - | |
Cla02g01868 | 565 | MobiDBLite | consensus disorder prediction | 378 | 403 | - | - | |
Cla02g01868 | 565 | ProSitePatterns | Protein kinases ATP-binding region signature. | 110 | 133 | IPR017441 | GO:0005524 | |
Cla02g01868 | 565 | Gene3D | Transferase(Phosphotransferase) domain 1 | 94 | 394 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01868 | Cla-Chr2:33859354 | Cla04g00656 | Cla-Chr4:21159123 | 0 | dispersed | |
Cla08g01182 | Cla-Chr8:24692033 | Cla02g01868 | Cla-Chr2:33859354 | 5.48E-147 | dispersed | |
Cla02g01867 | Cla-Chr2:33855379 | Cla02g01868 | Cla-Chr2:33859354 | 7.38E-142 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80370 | PF00069 | Pkinase | 1.60E-74 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01868 | - | - | csv:101206404 | 856.67 |