Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01868 ATTTTTGAAATTAAAGCCAAACCTTCAATCTTAATCCTCTCCATTAATCCTCGATCCCGAGATTTTTCCGATTCTAAGCCAACTGATTTTCTCATTCTGAGAGCCGACTTTTCGCTTAACCAAAACGCCAGGGGGCTGAAGGCTGGGCTGTGGTGGTTGATCTCCATTAAAGAGAAACCAGGTGGTGCTCCAAATCTCTGTGTCATAAATCAGGAATCCCCACCTTCTCTCTGCTTTAAAACGCTCGATTTACCTGCAAGTTATTGTGGAATTGGGATGGAGAATAAGGCAAGTGTGATGGTTCAACGATATGAATTAGGGAGATTGCTTGGCCAAGGAACCTTCGCAAAGGTGTATTATGCGAGGAATACAGGAAACAATCAAAGTGTGGCCATTAAGGTGATTGATAAAGAAAAGATTACGAAGGCTTCGCTAATCGATCAGATTAAGCGTGAAATATCGATTATGAGACTAGTTAGACATCCTAATATTCTACGTCTGTATGAGGTTATGGCCACCAAGACTAAGATCTACTTTGTTTTGGAATATGCTAAAGGTGGTGAGCTCTTTGACAAAGTTGCTAAAGGGAGGCTGCAGGAGGACATTGCTTGGAAATACTTTTATCAGTTAATTAATGCTGTTGATTTTTGTCACAGCAGGGGAGTGTATCACCGTGATATAAAGCCGGAGAACCTACTGCTTGATGAAAATGAGAATCTTAAGGTATCTGATTTTGGTTTAAGTGCTTTAGCTGAGTCCAAGCGTCAAGACGGGTTGCTTCACACGACTTGTGGTACACCAGCTTATGTTGCCCCTGAAGTCATCAATAGGAAGGGCTATGATGGTGCAAAAGCTGATATCTGGTCTTGTGGAGTAGTTTTGTTTGTCCTATTGGCAGGTTATCTCCCATTCCACAATTCGAATTTGATGGAGATGTATCGGAAGATTGGAAAAGCAGAGTATAAATGCCCTAGTTGGTTCCCTCGTGAAGTGCGGCGGTTGCTAAGCAGGATGCTTGATCCAGACCCCATTGCTAGGACTTCAATAGCAATGATAAGACAAAGTTCTTGGTTCAAAAAGGGATTGAGGTCTAAGAATCTAAGAAGTGGAATAGAAAGCAATGCTGTAGCGTCTGAAGATGCAGCAGCTGTTTCTGGACCGTCCGAGAGAAGTGTGCCAGCAGAAGGAAATCAAGAGCCAGATAGACCTCCAACTTTGAATGCTTTCGATATCATCTCCCTTTCCGCGGGGTTCAATTTATCCAGTTTATTTGAAGACAATTCAAAGAAGAAAGAAACATTGTTTACTTGTAGAAAACCAGCCTCTGTTATTCTCTCAAAACTAGAAGAAATGGCTAAACTTCTTAGGTTTCGAGTACAGAAGAAAGAAGCAGGCCTATTGAAATTTGAGGCACTAACAGAGGGAAGAAAGGGGGTATTATCCATTGATACAGAGATCTTCGAGGTTACTCCATCTTTTTATTTGGTGGAAATGAAAAAATCAAACGGAGACACATTGGAATATCAGAAAATATTGAAAGAGGACATAAGGCCAGCTCTACAGGATATTGTATGGGTTTGGCGAGGAGAGCAGGAGCAGCAGCAACAAAATCCTCAGCCTCAGCCTCAGCCTCTTCAACCGCAGGATCGGGTTCGAGATCCTTATACAGAGCAAGAGGGTGCATCACAACCGCAGTAG 1698 42.4 IFEIKAKPSILILSINPRSRDFSDSKPTDFLILRADFSLNQNARGLKAGLWWLISIKEKPGGAPNLCVINQESPPSLCFKTLDLPASYCGIGMENKASVMVQRYELGRLLGQGTFAKVYYARNTGNNQSVAIKVIDKEKITKASLIDQIKREISIMRLVRHPNILRLYEVMATKTKIYFVLEYAKGGELFDKVAKGRLQEDIAWKYFYQLINAVDFCHSRGVYHRDIKPENLLLDENENLKVSDFGLSALAESKRQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVVLFVLLAGYLPFHNSNLMEMYRKIGKAEYKCPSWFPREVRRLLSRMLDPDPIARTSIAMIRQSSWFKKGLRSKNLRSGIESNAVASEDAAAVSGPSERSVPAEGNQEPDRPPTLNAFDIISLSAGFNLSSLFEDNSKKKETLFTCRKPASVILSKLEEMAKLLRFRVQKKEAGLLKFEALTEGRKGVLSIDTEIFEVTPSFYLVEMKKSNGDTLEYQKILKEDIRPALQDIVWVWRGEQEQQQQNPQPQPQPLQPQDRVRDPYTEQEGASQPQ 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33859354 33861699 - ClCG02G019130.1 Cla02g01868 267994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01868 565 PANTHER - 94 540 - -
Cla02g01868 565 MobiDBLite consensus disorder prediction 530 565 - -
Cla02g01868 565 Pfam Protein kinase domain 104 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01868 565 Pfam NAF domain 403 461 IPR004041 GO:0007165
Cla02g01868 565 ProSiteProfiles Protein kinase domain profile. 104 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01868 565 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 94 540 - -
Cla02g01868 565 CDD CIPK_C 407 521 - -
Cla02g01868 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Cla02g01868 565 ProSiteProfiles NAF domain profile. 401 425 IPR018451 GO:0007165
Cla02g01868 565 SMART serkin_6 104 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g01868 565 CDD STKc_SnRK3 103 357 - -
Cla02g01868 565 SUPERFAMILY Protein kinase-like (PK-like) 101 359 IPR011009 -
Cla02g01868 565 Gene3D Kinase associated domain 1, KA1 401 526 - -
Cla02g01868 565 MobiDBLite consensus disorder prediction 378 403 - -
Cla02g01868 565 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Cla02g01868 565 Gene3D Transferase(Phosphotransferase) domain 1 94 394 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01868 Cla-Chr2:33859354 Cla04g00656 Cla-Chr4:21159123 0 dispersed
Cla08g01182 Cla-Chr8:24692033 Cla02g01868 Cla-Chr2:33859354 5.48E-147 dispersed
Cla02g01867 Cla-Chr2:33855379 Cla02g01868 Cla-Chr2:33859354 7.38E-142 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80370 PF00069 Pkinase 1.60E-74 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01868 - - csv:101206404 856.67