Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01870 ATGGCTTTTACTACTTCTCACACTCCAAAACATGTGGTGGTTTCTGTTTTAGCTTTGCAGGTAACCTTCCTTCTCATGCCCACCTCTTCTGCTCAACTCTCCACTTCTTTCTACTCCAAGACTTGCCCTAAACTTCTCTTTATAGTTCGCTGCGGCGTTCAATCTGCCATTGCTAAGGAAACTCGTATAGGCGCTTCCCTCCTTCGTCTTCACTTCCATGACTGTTTTGTTAACGGATGTGATGGGTCAATTCTTTTAGATGATACTGCAACTTTTAGAGGGGAGCAAACTGCGCCTCCGAATAATAGGTCTGTTAGAGGCTTTGATGTAATAAAAGCCATCAAGAGTAACGTAGAAAAATTTTGTCCTGGTGTGGTTTCTTGCGCTGATATTTTGACTCTTACTGCACGTGACTCTGTTAACATTTTGGGAGGACCAACTTGGGACGTGAAATTAGGAAGAAGAGATTCAAAAACAGCCAGCTTCTCCGCTGCCAGTAGTGGCGTCATCCCTCCACCCACTTCAACCCTTGCCAACCTCATTAATCGATTCAGTGCTGTAGGCCTCTCCGCCAAAGACATGGTTGCCTTGTCTGGTGCGCACACGATAGGTCTAGCAAGGTGTATATCCTTTAGGAATCGTATATACAATGAGAGCAACATAGACGCTTCATTCGCAAAGCTAAGACAGAGGAATTGCCCAAGAAGTGGAGGAGATGACAATCTTACCCCTCTAGACGTTGCTACCCCAAAGCTTTTCGACAACCATTACTACAAGAATCTTTTGAACAAAAAGGGGTTGCTCCACTCCGATCAAATCCTCCACAACGGCGGATCCACTGATTCCTTAGTCAAACAGTATAGTCAAAATGATAAGACTTTCGACGCCGATTTCGTGGCAGCAATGATTAAAATGGGAGACATCCGACCACTCACCGGATCACAAGGCGAGATCAGAAAGGTCTGCAGCAGACCCAACTAA 981 45.26 MAFTTSHTPKHVVVSVLALQVTFLLMPTSSAQLSTSFYSKTCPKLLFIVRCGVQSAIAKETRIGASLLRLHFHDCFVNGCDGSILLDDTATFRGEQTAPPNNRSVRGFDVIKAIKSNVEKFCPGVVSCADILTLTARDSVNILGGPTWDVKLGRRDSKTASFSAASSGVIPPPTSTLANLINRFSAVGLSAKDMVALSGAHTIGLARCISFRNRIYNESNIDASFAKLRQRNCPRSGGDDNLTPLDVATPKLFDNHYYKNLLNKKGLLHSDQILHNGGSTDSLVKQYSQNDKTFDADFVAAMIKMGDIRPLTGSQGEIRKVCSRPN 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33869612 33871076 - ClCG02G019150.2 Cla02g01870 267996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01870 326 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Cla02g01870 326 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 PANTHER PEROXIDASE 72-RELATED 12 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 SUPERFAMILY Heme-dependent peroxidases 32 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 Gene3D - 37 323 - -
Cla02g01870 326 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 ProSiteProfiles Plant heme peroxidase family profile. 32 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 CDD secretory_peroxidase 32 324 IPR033905 GO:0004601|GO:0042744
Cla02g01870 326 PANTHER PEROXIDASE 12 323 - -
Cla02g01870 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Cla02g01870 326 Pfam Peroxidase 52 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla02g01870 326 Gene3D Peroxidase, domain 2 171 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01870 Cla-Chr2:33869612 Cla11g00557 Cla-Chr11:6305572 4.90E-137 dispersed
Cla02g01870 Cla-Chr2:33869612 Cla02g01871 Cla-Chr2:33876633 9.21E-19 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01870 K00430 - csv:101207371 575.089