Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01873 | ATGGCATCCCTTGGCCCTCTTTTGCTATGTTTTATTGTTTTATCAGCTGCCCTAAGCCATAGCCATGCACAGCTAACTCCAAACTTTTACAATAAAGTCTGTCCTAAGGCTTTGTCCACCATCAAATCCGTGGTCAAGAACGCCATTAGACGTGAGCCTCGAATGGGAGCTTCCCTCTTACGTCTCCATTTCCATGATTGCTTTGTCAATGGGTGTGACGGATCCGTATTGTTGGATGATACTGCTACTTTTATGGGAGAAAAGACTGCATTTCCTAATGTTAACTCGATTAGAGGATTTGAAGTTGTTGACAAGATTAAGACACAAGTGAATAAAGTTTGCAAAGGAAATGTCGTGTCTTGTGCTGATATTTTAGCAGTTGCAGCTCGTGACTCCGTTGCTATTCTTGGAGGACCAAACTACAAAGTATTAGTAGGAAGAAGAGACGCAAGAAGAGCGAGTGCAGAAGATGCCAATAGAAATCTCCCTCCGCCATTTTTCAGCTTCACACAACTTCTATCCAACTTCCAATCTCATGGCCTAAACCTTAAGGACCTCGTCGTCTTGTCAGCCGGCCACACTCTCGGGTATGCTCGGTGCACCAATTTTCGAACTAGGATATACAACGACACCAACATCAACCCGAAATTCGCAGGGGTATTGAAGGGAAAGTGCCCACAGAGTGGGGGCGATGACAATCTGAAGGGGCTTGACATGACTCCAAATTTCTTTGACAATGCTTACTTCAAGGCTTTGTTGACAAACAATGGCCTTCTACATTCTGACCAGGAACTGTTCGGTGGCGGCAACAACGACAGCGATGGTTTGGTGAAGTATTATAGCAGATATCCAATTGCCTTTAGAAATGATTTTGGTTCTTCCATGATCAAAATGGGGAATATGAACCCACTTACAGGAACTGCCCTAAGCCATAGCCATGCACAGCTGACTCCAAACTTTTACAACAATGTCTGCCCCATGGCCTTGCCCACCATCAAATCCGTCGTCTCGAGCGCCATCAAACGTGAGCCTCGAATGGGAGCTTCCCTCTTACGTCTCCATTTCCATGATTGTTTTGTCAATGGGTGTGACGGATCCGTGTTGTTGGATGATACTGCTATTTTCACGGGAGAAAAGACTGCATTTCCTAATGTTAACTCGATTAGAGGATTTGAAGTTGTTGACAAGATTAAGACACAAGTGAATAAAGTTTGCAAAGGAAATGTCGTGTCTTGTGCTGACATTTTAGCAGTTGCTGCTCGTGACTCCGTTGCTATTCTCGGAGGGCCAAACTACAAAGTATTAGTAGGAAGAAGAGACGCAAAAAGCGCGAGTGCAGACGATGCCAATGGAAATCTCCCTCCACCATTTTTCAACTTCACACAACTTCTATCCAACTTCCAATCTCATGGCCTCAACCTCAAGGACCTCGTCGTCTTGTCAGCCGGCCACACTCTCGGGTACTCCCGATGCACCAATTTTCGAACCAGGATATATAACGACACCAACATTGACCCGAAATTTGCAGCAGCATTACAAGGCAACTGCCCACAGAGCGGGGGCGATGACAATCTGAGGAGCCTTGATATGACTCCAAATTTCTTTGACAATGCTTACTTCAAGGCTTTGTTGACAAACAAGGGCCTTTTACATTCCGACCAGGAACTGTTCGGTGGCGGCAACAGCGACAGCGATGGTTTGGTGAAGTATTATAGCAGATATCCAATTGCCTTTAGAAATGATTTTGGTTCTTCCATGATCAAAATGGGGAATATGAACCCACTTACAGGAAGTAATGGAGAAATCAGAGCCAATTGCAGGCTTTTTTTGTAA | 1833 | 44.84 | MASLGPLLLCFIVLSAALSHSHAQLTPNFYNKVCPKALSTIKSVVKNAIRREPRMGASLLRLHFHDCFVNGCDGSVLLDDTATFMGEKTAFPNVNSIRGFEVVDKIKTQVNKVCKGNVVSCADILAVAARDSVAILGGPNYKVLVGRRDARRASAEDANRNLPPPFFSFTQLLSNFQSHGLNLKDLVVLSAGHTLGYARCTNFRTRIYNDTNINPKFAGVLKGKCPQSGGDDNLKGLDMTPNFFDNAYFKALLTNNGLLHSDQELFGGGNNDSDGLVKYYSRYPIAFRNDFGSSMIKMGNMNPLTGTALSHSHAQLTPNFYNNVCPMALPTIKSVVSSAIKREPRMGASLLRLHFHDCFVNGCDGSVLLDDTAIFTGEKTAFPNVNSIRGFEVVDKIKTQVNKVCKGNVVSCADILAVAARDSVAILGGPNYKVLVGRRDAKSASADDANGNLPPPFFNFTQLLSNFQSHGLNLKDLVVLSAGHTLGYSRCTNFRTRIYNDTNIDPKFAAALQGNCPQSGGDDNLRSLDMTPNFFDNAYFKALLTNKGLLHSDQELFGGGNSDSDGLVKYYSRYPIAFRNDFGSSMIKMGNMNPLTGSNGEIRANCRLFL | 610 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 33903015 | 33915093 | + | ClCG02G019180.1 | Cla02g01873 | 267999 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01873 | 610 | Pfam | Peroxidase | 333 | 572 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | Pfam | Peroxidase | 42 | 281 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PRINTS | Plant peroxidase signature | 409 | 419 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PRINTS | Plant peroxidase signature | 584 | 597 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PRINTS | Plant peroxidase signature | 526 | 541 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PRINTS | Plant peroxidase signature | 428 | 443 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PRINTS | Plant peroxidase signature | 389 | 402 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PRINTS | Plant peroxidase signature | 349 | 369 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PRINTS | Plant peroxidase signature | 475 | 487 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PRINTS | Plant peroxidase signature | 542 | 559 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PRINTS | Plant peroxidase signature | 325 | 344 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | CDD | secretory_peroxidase | 24 | 308 | IPR033905 | GO:0004601|GO:0042744 | |
Cla02g01873 | 610 | Gene3D | - | 28 | 307 | - | - | |
Cla02g01873 | 610 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 476 | 486 | IPR019793 | - | |
Cla02g01873 | 610 | SUPERFAMILY | Heme-dependent peroxidases | 24 | 307 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PRINTS | Haem peroxidase superfamily signature | 185 | 200 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PRINTS | Haem peroxidase superfamily signature | 237 | 252 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PRINTS | Haem peroxidase superfamily signature | 119 | 136 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PRINTS | Haem peroxidase superfamily signature | 137 | 149 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 322 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PANTHER | CATIONIC PEROXIDASE | 11 | 307 | - | - | |
Cla02g01873 | 610 | PANTHER | CATIONIC PEROXIDASE | 309 | 607 | - | - | |
Cla02g01873 | 610 | Gene3D | Peroxidase, domain 2 | 454 | 589 | - | - | |
Cla02g01873 | 610 | Gene3D | Peroxidase, domain 2 | 163 | 298 | - | - | |
Cla02g01873 | 610 | CDD | secretory_peroxidase | 315 | 609 | IPR033905 | GO:0004601|GO:0042744 | |
Cla02g01873 | 610 | Gene3D | - | 319 | 607 | - | - | |
Cla02g01873 | 610 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 185 | 195 | IPR019793 | - | |
Cla02g01873 | 610 | ProSitePatterns | Peroxidases active site signature. | 56 | 67 | IPR019794 | GO:0004601 | |
Cla02g01873 | 610 | ProSitePatterns | Peroxidases active site signature. | 347 | 358 | IPR019794 | GO:0004601 | |
Cla02g01873 | 610 | ProSiteProfiles | Plant heme peroxidase family profile. | 315 | 610 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | SUPERFAMILY | Heme-dependent peroxidases | 315 | 608 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PANTHER | PEROXIDASE 72-RELATED | 11 | 307 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cla02g01873 | 610 | PANTHER | PEROXIDASE 72-RELATED | 309 | 607 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01873 | Cla-Chr2:33903015 | Cla09g00439 | Cla-Chr9:4162682 | 1.43E-126 | dispersed | |
Cla02g01871 | Cla-Chr2:33876633 | Cla02g01873 | Cla-Chr2:33903015 | 1.42E-13 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01873 | K00430 | - | csv:101204979 | 540.421 |