Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g01883 | ATGGCTACCGAGGCGACCGAAGCCACGACCAAGTTCCAGAGTCCGGATTTTCGTCCGGTACCGTCGCCTCCAGATTTCCATCCCGAGATTATGGTCTCAGCTCATGATGGTCTTCGGTTCTGGCAGTTCATGATTGCCGGTTCAATCGCAGGGTCTGTTGAGCATATGGGTATGTTTCCGGTTGATACTGTCAAGACCCATATGCAAGCACTTGGTTCATGTCCAATTAAATCTGTTGGAGTTCGACAAGCCCTTAGGTCAATTTTGAAATCAGAGGGACCGGCTGGGTTTTATCGTGGTATTGGTGCCATGGGTCTTGGAGCTGGACCTGCACATGCCGTATATTTTACTGTCTACGAGAATTGTAAGAAGTTTTTCTCCGGTGGGGATCCTAATAATTCTATTGCTCACGCTGCTTCTGGCGTCTGTGCAACGGTGGCGAGTGACGCTGTGTTTACACCGATGGATATGGTTAAACAGAGGCTGCAGCTGAGTAATAATTCCTACAAGGGAGTTTTGGATTGTATCAAAAGGGTCCTTAGAGAGGAGGGTGTTAAAGCATTTTACGCATCATATAGAACTACAGTGTTGATGAATGCTCCATTTACTGCTGTGCATTTTGCTACTTATGAAGCTGCAAAGAGAGGTTTGATGGAGGTTTCGCCAGAGAGTGTAAATGATGAACAGTGGATTGTTCATGCGACGGCAGGAGCTGCTGCTGGAGCCTCAGCTGCACTTGTTACAACGCCGCTTGATGTGGTTAAGACTCAATTACAATGTCAGGGTGTATGTGGATGCGATAGATTCAAAAGCGGGTCAATCAGGGACGTAATTCGGACAATACTCAAGAAGGATGGATATAGAGGGCTTATGAGAGGGTGGGTTCCAAGGATGCTCTTTCATGCTCCGGCTGCAGCTATATGCTGGTCGACATATGAAGCGTTAAAGTCTTTCTTCCACGAGCTCAATGGCAGTGGCAGCGACAACTTGACATGA | 996 | 47.39 | MATEATEATTKFQSPDFRPVPSPPDFHPEIMVSAHDGLRFWQFMIAGSIAGSVEHMGMFPVDTVKTHMQALGSCPIKSVGVRQALRSILKSEGPAGFYRGIGAMGLGAGPAHAVYFTVYENCKKFFSGGDPNNSIAHAASGVCATVASDAVFTPMDMVKQRLQLSNNSYKGVLDCIKRVLREEGVKAFYASYRTTVLMNAPFTAVHFATYEAAKRGLMEVSPESVNDEQWIVHATAGAAAGASAALVTTPLDVVKTQLQCQGVCGCDRFKSGSIRDVIRTILKKDGYRGLMRGWVPRMLFHAPAAAICWSTYEALKSFFHELNGSGSDNLT | 331 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 34027113 | 34031010 | - | ClCG02G019290.1 | Cla02g01883 | 268009 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g01883 | 331 | PRINTS | Mitochondrial carrier protein signature | 43 | 56 | IPR002067 | GO:0055085 | |
Cla02g01883 | 331 | PRINTS | Mitochondrial carrier protein signature | 56 | 70 | IPR002067 | GO:0055085 | |
Cla02g01883 | 331 | PRINTS | Mitochondrial carrier protein signature | 147 | 165 | IPR002067 | GO:0055085 | |
Cla02g01883 | 331 | PRINTS | Mitochondrial carrier protein signature | 189 | 207 | IPR002067 | GO:0055085 | |
Cla02g01883 | 331 | PRINTS | Mitochondrial carrier protein signature | 237 | 259 | IPR002067 | GO:0055085 | |
Cla02g01883 | 331 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 228 | 318 | IPR018108 | - | |
Cla02g01883 | 331 | PANTHER | MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED | 5 | 325 | - | - | |
Cla02g01883 | 331 | Pfam | Mitochondrial carrier protein | 133 | 219 | IPR018108 | - | |
Cla02g01883 | 331 | Pfam | Mitochondrial carrier protein | 38 | 127 | IPR018108 | - | |
Cla02g01883 | 331 | Pfam | Mitochondrial carrier protein | 229 | 320 | IPR018108 | - | |
Cla02g01883 | 331 | Gene3D | Mitochondrial carrier domain | 167 | 331 | IPR023395 | - | |
Cla02g01883 | 331 | PANTHER | MITOFERRIN-1-RELATED | 5 | 325 | - | - | |
Cla02g01883 | 331 | Gene3D | Mitochondrial carrier domain | 24 | 166 | IPR023395 | - | |
Cla02g01883 | 331 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 38 | 125 | IPR018108 | - | |
Cla02g01883 | 331 | SUPERFAMILY | Mitochondrial carrier | 36 | 314 | IPR023395 | - | |
Cla02g01883 | 331 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 132 | 216 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01883 | Cla-Chr2:34027113 | Cla04g00684 | Cla-Chr4:21617124 | 9.60E-151 | dispersed | |
Cla05g02192 | Cla-Chr5:33550162 | Cla02g01883 | Cla-Chr2:34027113 | 9.42E-08 | dispersed | |
Cla02g01883 | Cla-Chr2:34027113 | Cla08g00747 | Cla-Chr8:19756856 | 2.73E-06 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g01883 | K15113 | - | csv:101215924 | 637.876 |