Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g01897 ATGGCCGCCTGTCCCACCGACTTCACTCGCGACTCCGCCTGTCGCGACGGACTCGCCGCCGCCCACCTCAAACTCATCTCCATCTTCCTCATCTTCATCACCAGCGTCATCGGCGTCTCCTCGCCGGTCCTCCTCACTCGCTTCTTCCACGGCAAACCTGTCTACGACAAAGCCATTCTCATCATCAAATGCTTCGCCGCCGGCGTTATTCTCTCCACCTCCCTCGTCCACGTCCTCCCCGACGCCTTCGACGCCCTCTCCGACTGCCGCGTCGCCTCCCACCATCCCTGGCGGGACTTTCCCTTTTCCGGCCTCATCACCATGGTCGGCGCTCTCGTCGCCCTCCTCGTGGACGTCACAGCCACGTCACACGTCGAACACGGGCAGTATAATCCGGTGGAGGATTCCGGCGGGGAAATTGGGCTTCTGGTGGCGGGGGATTTGAAATCGGAGATGGTGGGAGGCGAGGGAGGAAGGGAAGAGGAATTAGTGAAGATGAAACAGAAATTAGTATCGAAAGTACTGGAAATTGGGATAATATTTCATTCGGTCATAATTGGAGTAACCATGGGAATGTCTCAGAATCAGTGTACGATTAGGCCGCTTGTTGCTGCTCTTGCTTTTCATCAAATCTTCGAAGGAATGGGTCTTGGCGGATGTATTGCTCAGGCAGGATTTAGCTTCACAACGACGTCGTATATGTGTTTTATGTTCTCAGTGACAACGCCGATGGGTATAGTATTAGGGATGGTACTATTTTCAATAACAGGTTATGACGATAACAATCCCAAAGCTTTGATAATGGAAGGTTTATTGGGTTCATTTTCATCTGGGATTCTCATATACATGGCTTTAGTAGATTTAATAGCCGTTGATTTTTTTCACAACAAGATGATGAGCTCAAATCAATGGCTGAAAAAGACTTGTTTTATTGCCTTGTTGCTTGGCTCTGCTTCCATGTCTGTTTTGGCTTTGTGGGCTTGA 984 50.3 MAACPTDFTRDSACRDGLAAAHLKLISIFLIFITSVIGVSSPVLLTRFFHGKPVYDKAILIIKCFAAGVILSTSLVHVLPDAFDALSDCRVASHHPWRDFPFSGLITMVGALVALLVDVTATSHVEHGQYNPVEDSGGEIGLLVAGDLKSEMVGGEGGREEELVKMKQKLVSKVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLGGCIAQAGFSFTTTSYMCFMFSVTTPMGIVLGMVLFSITGYDDNNPKALIMEGLLGSFSSGILIYMALVDLIAVDFFHNKMMSSNQWLKKTCFIALLLGSASMSVLALWA 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34145621 34147155 + ClCG02G019430.1 Cla02g01897 268023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g01897 327 PANTHER ZINC/IRON TRANSPORTER 3 327 - -
Cla02g01897 327 Pfam ZIP Zinc transporter 159 324 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cla02g01897 327 Pfam ZIP Zinc transporter 22 127 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cla02g01897 327 PANTHER ZINC TRANSPORTER 6, CHLOROPLASTIC 3 327 - -
Cla02g01897 327 TIGRFAM zip: ZIP zinc/iron transport family 11 327 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01897 Cla-Chr2:34145621 Cla11g01645 Cla-Chr11:30141037 4.90E-79 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g01897 K14709 - csv:101214729 562.762