Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02009 ATGGATTGTGGAAGAAGATTTGGATTGCTGTTCTGGGTTTTGTTTATTTCCTTGCTGCCTTTCATTTCTTGTTTGTTTAAGCCGGTAGATAAGTATCTTATTGACTGTGGATCGGCTTCTAATGTCTCTGTGGGTAATCGTGTTTTCATGGCCGATAATTTGGCTTCACAGCTGCTTTCAACCCCACAACCCATTCTGGCTGATTCTAATACGTCTTCAGTACCCGCTAGTTCTTCTAATGATTCCTTGCTGTTCCAAACGGCTAGAATTTTCACTGGAACATCAAAATACAAGTTTCCAATTAAGGCTGGAAGGCACTGGATCCGTCTCTATTTCTATCCATTTGTGTTTTCTAGCTTCAATATGAGTGCTGCAAATTTTAGTGTTTCGACCCAAGATTTTGTTCTGCTGCGGGATTTAGTTGTAGGGAAGAATCCTATAGTCAAAGAATTCTCTGTGAACATAACGTCAGATACTCTTGAAGTTATCTTTGTTCCTGTTAATGGCTCCATTGCATATGTGAATGCCATAGATGTTACTTCTGTTCCTGACATTGTCATTCTTGATGAAGCCAATTTGTTAGAACCATCTGGTAAATTTCAAGGGCTGTCTAACCAGGCATATGAGACGGTTGCTAGGGTTAATATGGGTGGGCCGAGTGTCGCTCCTGATAATGATCCTCTTACACGAAGTTGGGTCTCTGATGAAGGCTTTCTAGTTAATAAGAATTCTGCAACAAGTTTCTCTAACATTGCAGCTGTTACATACAGTGCTGATGGGGCAGCGCCAGAGATTGCTCCAAATGTTGTCTACGGTACCCTCACTGAGATGAACTCGAAAGATGATCCAAACAGCAATTTCAATGTGACATGGCGGTTTAAAGTGGATCCTGAGTTTCAGTATCTTGTTCGGTTTCACTTCTGTGACATTGTGAGCAAATCTCTACACCAACTTTATTTCAGTGTTTACATTGATACGTGGCTGGTTGTTCAGGATCTAGATCTCAGTATTCCTCTTAACAACGCTCTGAGCACTCCATACTATATGGACTATGTTACAGGGGTGATCAAGAATGACATACTTCTTGTGAGTATTGGCCCATCGACTATAGCCAATGTGTATCCAAATGCCATTCTAAATGGTCTGGAAATCATGAAAATGAACAATTCAGTTGGCAGTCTGAGTGGGGAAGATGCTGTAATTAGTTTTCCAAATACGAATTCTTCAAGTAAGCACATTGGCGTCATTGTGGGTGTGAGTGTTGGGGCATTTGTTGCAGCTATATTGGTTGGGATTCTGTTTATGCTACACAGACGAAAAAGGAAGGGAATGCATCAAGCTCCATCAAAAACGTGGATTTCAATATCCACTGCTGGAGGAATGTCACACACTATGGGAAGTAAATACTCAAATGGCACGATCACAAGTGCTGCTTCCAACTTTGGATATCGCATACCTTTTGCAACAGTTCAAGAGGCTACGAATAACTTTGATGAGAGTTGGGTTATTGGTATTGGTGGGTTTGGGAAAGTATACAAAGGAGTTTTAAATGATGGCACCAAAGTTGCTGTGAAGAGGGGTAATCCACGTTCCCAACAAGGACTGGCAGAGTTTCAAACTGAAATCGAGATGCTGTCTCAGTTCCGTCATCGTCATCTTGTTTCATTGATTGGGTACTGTGATGAGAGGAATGAGATGATATTGATTTATGAGTACATGGAACAGGGGACCCTGAAGAGTCATCTATATGGTTCTGATTTCCCTAGTTTGAGCTGGAAGGAGAGATTAGAGGTCTGCATCGGAGCTGCTAGAGGACTTCATTACCTCCACACTGGTTATGCTAAACCGGTTATTCATCGTGATGTGAAGTCTGCGAATATTTTGCTCGATGAAACTCTCATGGCAAAGGTTGCTGACTTTGGGCTTTCAAAGACTGGACCTGAGATTGACCAAACCCATGTCAGTACAGCTGTGAAAGGAAGTTTTGGGTACCTTGATCCTGAATATTTCAGGAGGCAACAACTGACTGAGAAATCAGATGTTTATTCTTTTGGGGTCGTTTTGTTTGAAGTACTTTGTGCAAGACCTGTCATAGATCCAACCCTTCCCAGAGAAATGGTAAACTTAGCTGAATGGGCAATGAAATGGCAGAAGAAAGGGCAGTTGGACCAAATCATTGATCCTACTTTAGTAGGAAAAATTAGACCAACTTCTCTTAGAAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTATGGAGTTGACAGGCCATCTATGGGAGACGTGTTATGGAATTTGGAGTATGCACTTCAGCTACAAGAAGCTGTCATTGAAGTTGATCCTGAAGATAACAGTACGAATATGATTGGCGAGCTCTCTCCACAAATTAACAATTTCAATGACATCGAGGCAGGTGTTTCTGCCACACGGTTTGACATTCCGGGTGCGGATGATCTCTCTGGAGTCTCCATGAGTAGGGTGTTCTCTCAGCTGGTGAAATCTGAGGAGGAGCCAAAATCAAACCAAAATTTCAGGATTTCTTCAATGTCAAACAACTACATGTAA 2568 41.78 MDCGRRFGLLFWVLFISLLPFISCLFKPVDKYLIDCGSASNVSVGNRVFMADNLASQLLSTPQPILADSNTSSVPASSSNDSLLFQTARIFTGTSKYKFPIKAGRHWIRLYFYPFVFSSFNMSAANFSVSTQDFVLLRDLVVGKNPIVKEFSVNITSDTLEVIFVPVNGSIAYVNAIDVTSVPDIVILDEANLLEPSGKFQGLSNQAYETVARVNMGGPSVAPDNDPLTRSWVSDEGFLVNKNSATSFSNIAAVTYSADGAAPEIAPNVVYGTLTEMNSKDDPNSNFNVTWRFKVDPEFQYLVRFHFCDIVSKSLHQLYFSVYIDTWLVVQDLDLSIPLNNALSTPYYMDYVTGVIKNDILLVSIGPSTIANVYPNAILNGLEIMKMNNSVGSLSGEDAVISFPNTNSSSKHIGVIVGVSVGAFVAAILVGILFMLHRRKRKGMHQAPSKTWISISTAGGMSHTMGSKYSNGTITSAASNFGYRIPFATVQEATNNFDESWVIGIGGFGKVYKGVLNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMEQGTLKSHLYGSDFPSLSWKERLEVCIGAARGLHYLHTGYAKPVIHRDVKSANILLDETLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKKGQLDQIIDPTLVGKIRPTSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAVIEVDPEDNSTNMIGELSPQINNFNDIEAGVSATRFDIPGADDLSGVSMSRVFSQLVKSEEEPKSNQNFRISSMSNNYM 855
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35069904 35073686 - ClCG02G020600.2 Cla02g02009 268135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02009 855 Pfam Protein tyrosine and serine/threonine kinase 502 694 IPR001245 GO:0004672|GO:0006468
Cla02g02009 855 Gene3D - 206 389 - -
Cla02g02009 855 Gene3D - 31 183 - -
Cla02g02009 855 Gene3D Phosphorylase Kinase; domain 1 460 572 - -
Cla02g02009 855 ProSiteProfiles Protein kinase domain profile. 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g02009 855 PANTHER OS07G0166700 PROTEIN 19 830 IPR045272 GO:0004714|GO:0006468
Cla02g02009 855 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Cla02g02009 855 SUPERFAMILY Protein kinase-like (PK-like) 474 768 IPR011009 -
Cla02g02009 855 CDD STKc_IRAK 503 768 - -
Cla02g02009 855 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 19 830 - -
Cla02g02009 855 Pfam Malectin-like domain 34 387 IPR024788 -
Cla02g02009 855 SMART serkin_6 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g02009 855 Gene3D Transferase(Phosphotransferase) domain 1 573 790 - -
Cla02g02009 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01342 Cla-Chr2:27675668 Cla02g02009 Cla-Chr2:35069904 0 dispersed
Cla02g02009 Cla-Chr2:35069904 Cla06g01573 Cla-Chr6:29289936 0 dispersed
Cla02g02009 Cla-Chr2:35069904 Cla11g01796 Cla-Chr11:31629607 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80379 PF12819 Malectin_like 5.30E-31 CL0202 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02009 - - csv:101218488 1518.06