Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g02062 | ATGTTTAGGGAGAAGGAGGGAGGGGACCATTTTCCAAATTCTGTCAAACAAAAAACAAAACACACAATAACTCCATCAAGAGCCGTTGGAGGCGGAAGAGTGGAGCAAGGCGAATTCCAAAGCAAAGACTACCAAGACCCACCTCCCGCTCCTCTCATCGACCCTGAAGAACTAACCAAATGGTCTCTTTACAGAGCCGCCATCGCCGAGTTCATCGCCACTCTCCTCTTCCTCTATGTCACCGTTTTGACCGTCATCGGTTACTCCCACCAAAGCGACCCTTCCGTTTCCACCGACCCCTGTAACGGCGTTGGCATCCTCGGTATCGCTTGGGCCTTCGGCGGTATGATTTTCATCCTTGTTTACTGCACCGCTGGTATCTCCGGTGGCCACATTAACCCCGCCGTCACTTTCGGCCTCTTCTTAGCTCGCAAAGTCTCTCTGGTTCGTGCTCTGTTGTACATCATTGCTCAGTGCGCCGGTGCTATTTGCGGCTGTGGCTTGGTTAGAGCCTTCCAATCTGCTTATTATGTTAGATACAACGGCGGTGCTAATATGCTCAGTAATGGGTATAACAAAGGAACTGGATTAGGCGCTGAAATCATCGGTACTTTTGTTCTTGTTTACACTGTTTTCTCTGCTACTGATCCCAAGAGAAACGCCAGAGATTCTCATGTTCCTGTTTTGGCTCCACTCCCAATTGGGTTTGCTGTGTTCATGGTTCATTTGGCTACAATCCCCATCACTGGAACTGGAATTAACCCTGCAAGAAGTTTTGGAGCTGCTGTCATCTTCAACAAAGAGAAAGCCTGGGATGACCAATGGATTTTCTGGGTTGGACCATTTATTGGAGCTGCAATTGCTGCAATTTACCATCAGTATGTGCTCAGAGCTGGAGCTATTAAAGCTCTTGGATCTTTCAGGAGCAATGCTTGA | 936 | 48.29 | MFREKEGGDHFPNSVKQKTKHTITPSRAVGGGRVEQGEFQSKDYQDPPPAPLIDPEELTKWSLYRAAIAEFIATLLFLYVTVLTVIGYSHQSDPSVSTDPCNGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCAGAICGCGLVRAFQSAYYVRYNGGANMLSNGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKEKAWDDQWIFWVGPFIGAAIAAIYHQYVLRAGAIKALGSFRSNA | 311 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 35637260 | 35640062 | - | ClCG02G021150.2 | Cla02g02062 | 268188 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g02062 | 311 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 35 | 311 | IPR034294 | - | |
Cla02g02062 | 311 | SUPERFAMILY | Aquaporin-like | 56 | 297 | IPR023271 | - | |
Cla02g02062 | 311 | TIGRFAM | MIP: MIP family channel proteins | 69 | 291 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g02062 | 311 | CDD | MIP | 65 | 295 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g02062 | 311 | ProSitePatterns | MIP family signature. | 131 | 139 | IPR022357 | - | |
Cla02g02062 | 311 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Cla02g02062 | 311 | PANTHER | AQUAPORIN PIP2-4-RELATED | 35 | 311 | - | - | |
Cla02g02062 | 311 | Pfam | Major intrinsic protein | 57 | 292 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g02062 | 311 | PRINTS | Major intrinsic protein family signature | 150 | 169 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g02062 | 311 | PRINTS | Major intrinsic protein family signature | 199 | 217 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g02062 | 311 | PRINTS | Major intrinsic protein family signature | 65 | 84 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g02062 | 311 | PRINTS | Major intrinsic protein family signature | 235 | 257 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g02062 | 311 | PRINTS | Major intrinsic protein family signature | 275 | 295 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g02062 | 311 | PRINTS | Major intrinsic protein family signature | 113 | 137 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla02g02062 | 311 | Gene3D | Glycerol uptake facilitator protein. | 50 | 311 | IPR023271 | - | |
Cla02g02062 | 311 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g01174 | Cla-Chr2:25220123 | Cla02g02062 | Cla-Chr2:35637260 | 4.62E-140 | dispersed | |
Cla02g02062 | Cla-Chr2:35637260 | Cla04g00884 | Cla-Chr4:23832679 | 4.73E-136 | dispersed | |
Cla10g01892 | Cla-Chr10:34818950 | Cla02g02062 | Cla-Chr2:35637260 | 1.31E-34 | dispersed | |
Cla04g00532 | Cla-Chr4:18897371 | Cla02g02062 | Cla-Chr2:35637260 | 1.39E-13 | transposed | |
Cla06g00512 | Cla-Chr6:6189219 | Cla02g02062 | Cla-Chr2:35637260 | 4.22E-19 | transposed | |
Cla10g01933 | Cla-Chr10:35173230 | Cla02g02062 | Cla-Chr2:35637260 | 5.73E-131 | wgd | |
Cla02g02062 | Cla-Chr2:35637260 | Cla04g00881 | Cla-Chr4:23808256 | 3.53E-139 | wgd | |
Cla02g02062 | Cla-Chr2:35637260 | Cla05g02143 | Cla-Chr5:33021643 | 6.97E-165 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g02062 | K09872 | - | csv:101215300 | 532.717 |