Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02070 ATGTCTATTTCATTGAACATTTCAAAGCCCATTTCCCCATTTCATTCAAATTCTGAGTTTCAACTCCTCATTTCGGCTACAACAACAACAAGCCCTTCTCTTCATGCGTTGAAACAGGCATGGAAAACCTTCCTCTTTAGTTTATGTGGCCTTGAATTCATGCCTTGTCATTTTCAGTTAACTCCATTAGAACTGCAGCCAAAGTTTTCATTTGGGAAGATCTTTATGGCTTATGGTAGTTCTAGATCCGTAAGGTTCCAAGACGATCTTGAATCATCTGCCCTGCCTACTATCAATGGTGGTGGTGTGACAAAGATCATATACAACATTGATGGCACACAAATACCGGAATCGAGCGGCAAGAGAACTTCGGCTTCTAGGAAGTCTGGAAGATCCCTGAGAGCTAAAGTTTTGTCTAGAGTTTTTTCAGAGGATTATGAGAGAGTACAAAGAAAAATATTGGATCCTAGGGGACAAGTCATAAGGCGATGGAATAAGATATTTTTAGTTGCTTGTTTAGTCTCTTTGTTTGTAGACCCTCTTTTCTTTTACTTGCCTGTGGTCAGGGATGAGGTGTGCATCGATATAGGAGTAGGTCTTGAAGTCGTCCTCACAACTATAAGATCAATAGCTGATGTTTTCTACACAATTCAGATTTTCATTAAGTTTCGTACAGCTTATGTTGCGCCCTCTTCTCGTGTATTTGGGAGAGGAGAGCTTGTGATAGATCCTTTTAAGATAGCAATAAGGTATCTACGTTATGGTTTCTGGATTGATCTCATTGCAGCCGTGCCAGTTCCCCAGGTACTGATCTGGATTGTAATCCCCAACCTTAGTGGTTCAACAATGACAAACACTAAGAACTTCCTAAGGTTCTTTCTCATATTCCAGTACCTCCCAAGGCTTTTTCTCATATTTCCTCTCTCAACACAAATTGTTAAGGCCACTGGACTTGTGACACAAACAGCATGGGCTGGAGCTGCTTATAACCTGATTCTTTATATGTTGGCAAGCCATGTTTTAGGAGCCTGCTGGTACCTTCTTTCAATTGAGCGACAAGAAGCATGCTGGAGAAGACTTTGTATGTTTGACAAATCTTGTAAAGATGGATTCTTCGACTGTCATAAGGTCGATGACCCTCAAAGGGACTCATGGTTTAATATGAGCAACATTAAAAGCTCATGCAATCCAAGTGGTTCCTTTTATCAATTTGGTATATATGGTGATGCAATAACTTTCCATGTCACAACCTCACCATTTTTCAACAAGTACTTCTACTGTCTTTGGTGGGGCCTGAAAAATCTTAGTTCCTTGGGACAAAATCTTGCCACAAGCACTTTTGTTGGGGAAATAATTTTTGCCATTATTGTGGCAACTCTTGGACTGGTTCTGTTTGCATTGCTCATTGGTAATATGCAGAAATACCTCCAATCAACGACTGTTCGATTAGAAGAGTGGAGAATAAGGAGAACTGATACAGAACAATGGATGCATCACAGGCAACTACCTCCAGAGCTCAGACAATCTGTCCGCAGATATGATCAGTATAAGTGGGTAGCAACTCGAGGAGTCGATGAAGAAGTGCTGCTTAGAAGCCTTCCCTTGGATCTCCGAAGAGACATAAAACGTCACCTTTGCCTTGACCTCGTTCGAAGGGTTCCATTGTTTGATCAAATGGATGAAAGAATGCTAGATGCAATATGCGAGAGACTTAAACCTGCCTTGAGCACAGAAGGCACATATCTCGTGCGAGAAGGCGACCCAGTCAATGAAATGTTATTCATAATTAGAGGTCATCTCGACTCGTACACTACTAATGGTGGTAGAACTGGGTTTTTCAACTCTTGTCGTATTGGCCCCGGTGATTTCTGTGGTGAGGAGCTGCTGACTTGGGCTCTCGACCCTCGTCCAAGTGTTGTACTTCCTTCTTCCACTCGAACGGTCAAAGCCATCTCTGAGGTAGAAGCATTTGCTCTCATAGCAGAGGACTTGAAATTTGTATCCTCCCAGTTCAGAAGACTCCACAGCAAACAACTGAGACACAAGTTCCGATTCTACTCGCATCAATGGCGAACGTGGGCTGCATGCTTTGTTCAAGCAGCATGGCGGAGATATAAGAGACGAAAAGAGCGAGCTGAGCTCAGAGCTAGAGAGAACTATCCGGCTACCAAAGTTGAGTCCCCACTTTCACCACCACCGACATCGAACTTGGATTCACGTTCAGGAAATGCTAGAAGGGGATTGAATAAGCGTTGTGTGTCAGATGCTGGGGTCGTAAGCTCGTTGCAGAAGCCAGAAGAGCCTGACTTCTCTATTGTCGAGGAATAA 2328 42.96 MSISLNISKPISPFHSNSEFQLLISATTTTSPSLHALKQAWKTFLFSLCGLEFMPCHFQLTPLELQPKFSFGKIFMAYGSSRSVRFQDDLESSALPTINGGGVTKIIYNIDGTQIPESSGKRTSASRKSGRSLRAKVLSRVFSEDYERVQRKILDPRGQVIRRWNKIFLVACLVSLFVDPLFFYLPVVRDEVCIDIGVGLEVVLTTIRSIADVFYTIQIFIKFRTAYVAPSSRVFGRGELVIDPFKIAIRYLRYGFWIDLIAAVPVPQVLIWIVIPNLSGSTMTNTKNFLRFFLIFQYLPRLFLIFPLSTQIVKATGLVTQTAWAGAAYNLILYMLASHVLGACWYLLSIERQEACWRRLCMFDKSCKDGFFDCHKVDDPQRDSWFNMSNIKSSCNPSGSFYQFGIYGDAITFHVTTSPFFNKYFYCLWWGLKNLSSLGQNLATSTFVGEIIFAIIVATLGLVLFALLIGNMQKYLQSTTVRLEEWRIRRTDTEQWMHHRQLPPELRQSVRRYDQYKWVATRGVDEEVLLRSLPLDLRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPALSTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVVLPSSTRTVKAISEVEAFALIAEDLKFVSSQFRRLHSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKRRKERAELRARENYPATKVESPLSPPPTSNLDSRSGNARRGLNKRCVSDAGVVSSLQKPEEPDFSIVEE 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35777075 35781552 - ClCG02G021250.2 Cla02g02070 268196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02070 775 Pfam Cyclic nucleotide-binding domain 578 664 IPR000595 -
Cla02g02070 775 Pfam Ion transport protein 164 482 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cla02g02070 775 ProSiteProfiles cAMP/cGMP binding motif profile. 555 652 IPR000595 -
Cla02g02070 775 Gene3D - 163 479 - -
Cla02g02070 775 CDD CAP_ED 555 686 IPR000595 -
Cla02g02070 775 MobiDBLite consensus disorder prediction 729 743 - -
Cla02g02070 775 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 81 774 - -
Cla02g02070 775 PANTHER - 81 774 - -
Cla02g02070 775 MobiDBLite consensus disorder prediction 716 747 - -
Cla02g02070 775 SUPERFAMILY Voltage-gated potassium channels 155 477 - -
Cla02g02070 775 Gene3D Jelly Rolls 553 673 IPR014710 -
Cla02g02070 775 Gene3D Helix hairpin bin 482 546 - -
Cla02g02070 775 PRINTS EAG/ELK/ERG potassium channel family signature 518 525 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cla02g02070 775 PRINTS EAG/ELK/ERG potassium channel family signature 468 477 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cla02g02070 775 PRINTS EAG/ELK/ERG potassium channel family signature 219 228 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cla02g02070 775 PRINTS EAG/ELK/ERG potassium channel family signature 336 346 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cla02g02070 775 PRINTS EAG/ELK/ERG potassium channel family signature 450 461 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cla02g02070 775 PRINTS EAG/ELK/ERG potassium channel family signature 424 441 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cla02g02070 775 SMART cnmp_10 555 686 IPR000595 -
Cla02g02070 775 SUPERFAMILY cAMP-binding domain-like 485 680 IPR018490 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00052 Cla-Chr1:416897 Cla02g02070 Cla-Chr2:35777075 0 dispersed
Cla02g02070 Cla-Chr2:35777075 Cla06g01285 Cla-Chr6:26208231 0 dispersed
Cla02g02070 Cla-Chr2:35777075 Cla10g01367 Cla-Chr10:28734213 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02070 K05391 - csv:101210775 1365.13