Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02074 ATGAAACCCAACACTTGCAATACCAATGGCCACGTCTCCGCCGTGGATGGTCTCTGCTTGAACGATCCATTGTACTGGGGCACCGCCGCCGAGGGGCTCAAGGGAAGCCACCTCGACGAGGTGAAGAAAATGGTGGGGGAGTACCGGCGAGGGGTGGTGCGGCTCGGTGGAGAGAGCTTGACGATTGGGCAGGTGGCGGCGGTGGCGTTGCACGACGGCGGAGTGAAGGTGGAACTGAATGAGGCGGCGAGAGAGGGAGTGAAGGCGAGTAGTGATTGGGTAATGGAGAGTATGAACAAAGGGACGGATAGTTATGGAGTCACCACTGGATTTGGTGCTACCTCCCATAGGAGAACCAATCAAGGAGCTGCTCTGCAGAAGGAGCTTATTCGGTTCTTGAACGCTGGAATATTTGGAAATGGAACAGAGTCTAATCACACGCTGCCTCACACTGCCACAAGAGCAGCCATGTTGGTCAGAATCAACACTCTTCTCCAAGGTTACTCTGGCATTAGATTTGAGATTTTGGAGTCAATTACGAAGCTTCTTAACCACAATGTCACACCTTGCCTTCCTTTACGAGGCACCATTACGGCTTCTGGTGATTTGGTTCCCTTTTCCTATATTGCTGGCTTTTTGACTGGTCGTCCCAATGCCAAGGCTGTCGGCCCAACTGGTAATCTCCTCGATGCTGGAGCAGCTTTTAAACTCGCTGGCATTGATGGTGGATTCTTCGAACTACAACCTAAAGAGGGTCTTGCACTTGTCAATGGGACGGGTGTTGGATCTGGTTTGGCATCTATTGTTTTGTTTGAGGCCAATATATTGGCTCTTTTGTCTGAGGTCATTTCGGCAATTTTTGCTGAAGTAATGCAAGGAAAACCTGAGTTTACTGATCACTTGACTCATAAATTGAAACATCATCCGGGTCAAATCGAGGCAGCAGCCATAATGGAGCATCTTTTGGATGGGAGTGCTTTCATAAAAGATGCTAAGAAGTTACACGAGTTGGATCCTCTTCAAAAGCCGAAACAAGACCGTTATGCTCTTCGGACTTCACCTCAATGGCTAGGCCCTCAAATTGAAGTGATTCGGCATTCGACGAAATCAATTGAGAGAGAGATCAACTCGGTGAATGACAATCCATTGATTGATGTTTCGAGGAATAAAGCTCTACATGGAGGGAATTTTCAAGGAACTCCGATTGGGGTGTCCATGGATAATACTAGATTGGCGCTTGCCTCCATTGGAAAGCTTTTGTTTGCTCAATTCTCTGAACTTGTGAATGATTTCTATAACAATGGATTGCCCTCAAACCTCTCAGGAGGAAGTAATCCAAGCTTGGATTATGGATTTAAAGGGGCTGAAATTGCCATGGCTTCTTATTGTTCAGAACTTCAATACCTGGCGAACCCGGTCACCAATCACGTCCAAAGCGCCGAGCAACACAACCAAGATGTGAACTCATTGGGTTTAATCTCTTCCCGAAAAACAGCTGAGGCAATAGATATCTTGAAGCTGATGAGCACAACTTTCCTAGTTGCTCTCTGCCAAGCCATAGATTTGAGACACATAGAGGAGAATCTGAGGAGCACTGTGAAGAACACAGTGAGTCAAGTGGCCAAGAAGGTTTTAACTATTGGAGTTAATGGGGAGCTTCATCCTTCAAGATTCTGTGAGAAAGATTTGCTGAAAGTCATTGATAGAGAATATGTTTTTGCTTACATTGACGATCCTTGCAGCATGACATATCCTTTAATGCAGAAGCTAAGGCAAGTTCTTGTGGAACATGCATTGAACAACAATGACGATTTGAAGAATTCAAACTCCTCAATCTTTCTAAAGATTGGAGCTTTTGAAGAGGAACTAAAAACCCTTTTGCCCAAAGAAGTAGAAAGTGGAAGACAAGCCATTGCAAAAGGCAAACCAACAATTCCCAACAAGATCAAGGATTGCAGATCATACCCACTTTACAGATTTGTTAGAGAAGAATTGGGAACTGCTATCTTGACAGGTGAAAAAGTGAAATCTCCTGGTGAAGAATTTGACAAAGTTTTTACTGCAATTTGTGAGGGGAAAATCATTGATCCTTTGCTTGAATGTCTTGAGAGTTGGAATGGGACTCCTCTTCCTATAAATTAA 2142 44.96 MKPNTCNTNGHVSAVDGLCLNDPLYWGTAAEGLKGSHLDEVKKMVGEYRRGVVRLGGESLTIGQVAAVALHDGGVKVELNEAAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTNQGAALQKELIRFLNAGIFGNGTESNHTLPHTATRAAMLVRINTLLQGYSGIRFEILESITKLLNHNVTPCLPLRGTITASGDLVPFSYIAGFLTGRPNAKAVGPTGNLLDAGAAFKLAGIDGGFFELQPKEGLALVNGTGVGSGLASIVLFEANILALLSEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHLLDGSAFIKDAKKLHELDPLQKPKQDRYALRTSPQWLGPQIEVIRHSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLLFAQFSELVNDFYNNGLPSNLSGGSNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSTTFLVALCQAIDLRHIEENLRSTVKNTVSQVAKKVLTIGVNGELHPSRFCEKDLLKVIDREYVFAYIDDPCSMTYPLMQKLRQVLVEHALNNNDDLKNSNSSIFLKIGAFEEELKTLLPKEVESGRQAIAKGKPTIPNKIKDCRSYPLYRFVREELGTAILTGEKVKSPGEEFDKVFTAICEGKIIDPLLECLESWNGTPLPIN 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35835235 35839500 + ClCG02G021285.1 Cla02g02074 268200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02074 713 CDD PAL-HAL 58 523 IPR001106 -
Cla02g02074 713 PANTHER HISTIDINE AMMONIA-LYASE 7 713 IPR001106 -
Cla02g02074 713 PANTHER AMMONIA-LYASE, PUTATIVE-RELATED 7 713 - -
Cla02g02074 713 Gene3D Fumarase/aspartase (Central domain) 261 707 - -
Cla02g02074 713 Gene3D - 14 259 IPR024083 -
Cla02g02074 713 Pfam Aromatic amino acid lyase 60 532 IPR001106 -
Cla02g02074 713 Gene3D - 526 647 IPR023144 -
Cla02g02074 713 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 22 703 IPR005922 GO:0005737|GO:0006559|GO:0016841
Cla02g02074 713 SUPERFAMILY L-aspartase-like 22 712 IPR008948 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g02074 Cla-Chr2:35835235 Cla04g00897 Cla-Chr4:23990787 0 dispersed
Cla02g02074 Cla-Chr2:35835235 Cla04g00895 Cla-Chr4:23967227 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02074 K10775 - csv:101218156 1359.74