Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02112 ATGGGTCAGATTCAGTACTCTGAGAAGTACTTCGACGACATTTACGAGTACAGGCATGTGGTTCTTCCACCCGAAGTGGCAAAGTTGCTTCCTAAGAATCGCCTGCTCTCGGAAAATGAGTGGCGTGCAATTGGAGTTCAGCAGAGTCGTGGGTGGGTGCACTATGCTATTCATCGGCCTGAGCCGCATATCATGCTATTCAGGAGGCCTCTGAACTACCAACAGCAGCAGGAGAATCTCGCTCAACAAAACGTGCTTGCTGCTAAATGA 270 49.63 MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLAAK 89
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36135319 36136858 - ClCG02G021690.1 Cla02g02112 268238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02112 89 SMART CKS_2 3 72 IPR000789 GO:0016538
Cla02g02112 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Cla02g02112 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Cla02g02112 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Cla02g02112 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Cla02g02112 89 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 86 - -
Cla02g02112 89 SUPERFAMILY Cell cycle regulatory proteins 1 83 IPR036858 GO:0016538
Cla02g02112 89 Gene3D - 1 83 IPR036858 GO:0016538
Cla02g02112 89 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Cla02g02112 89 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Cla02g02112 89 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 86 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01374 Cla-Chr1:27830889 Cla02g02112 Cla-Chr2:36135319 1.47E-51 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02112 K02219 - zju:107410685 171.014