Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g02112 | ATGGGTCAGATTCAGTACTCTGAGAAGTACTTCGACGACATTTACGAGTACAGGCATGTGGTTCTTCCACCCGAAGTGGCAAAGTTGCTTCCTAAGAATCGCCTGCTCTCGGAAAATGAGTGGCGTGCAATTGGAGTTCAGCAGAGTCGTGGGTGGGTGCACTATGCTATTCATCGGCCTGAGCCGCATATCATGCTATTCAGGAGGCCTCTGAACTACCAACAGCAGCAGGAGAATCTCGCTCAACAAAACGTGCTTGCTGCTAAATGA | 270 | 49.63 | MGQIQYSEKYFDDIYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLAAK | 89 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 36135319 | 36136858 | - | ClCG02G021690.1 | Cla02g02112 | 268238 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g02112 | 89 | SMART | CKS_2 | 3 | 72 | IPR000789 | GO:0016538 | |
Cla02g02112 | 89 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 3 | 17 | IPR000789 | GO:0016538 | |
Cla02g02112 | 89 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 18 | 32 | IPR000789 | GO:0016538 | |
Cla02g02112 | 89 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 40 | 54 | IPR000789 | GO:0016538 | |
Cla02g02112 | 89 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 55 | 69 | IPR000789 | GO:0016538 | |
Cla02g02112 | 89 | PANTHER | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 | 1 | 86 | - | - | |
Cla02g02112 | 89 | SUPERFAMILY | Cell cycle regulatory proteins | 1 | 83 | IPR036858 | GO:0016538 | |
Cla02g02112 | 89 | Gene3D | - | 1 | 83 | IPR036858 | GO:0016538 | |
Cla02g02112 | 89 | Pfam | Cyclin-dependent kinase regulatory subunit | 4 | 70 | IPR000789 | GO:0016538 | |
Cla02g02112 | 89 | ProSitePatterns | Cyclin-dependent kinases regulatory subunits signature 1. | 6 | 24 | IPR000789 | GO:0016538 | |
Cla02g02112 | 89 | PANTHER | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT | 1 | 86 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01374 | Cla-Chr1:27830889 | Cla02g02112 | Cla-Chr2:36135319 | 1.47E-51 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g02112 | K02219 | - | zju:107410685 | 171.014 |