Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla02g02140 | ATGACTACATTAGCCAGTACTTCTGAAATTGTTGAATCAACAGAAGAATTTGATTCTGAGAAAGCTGGGACGAGTTATGCGCTAGATGTAGGAAAAAGGTTTTCTATAGAGGATGACATTAATCGTCTGTTTCAAGCAATTGATATCAGAACCTTACGTAAGAGGTCAAGTCAGCAACGTGAAGTTGATAAAGATGCTCTGCGGAAGAGTGCGATGAAAAGACCAGTTAGAGTAGGTTCATCTCACATGGCAGGGATTGGAATTTCTGAACCTGCAAGTTTAAAGCAGGCGTTGAGGGGCTTATGCATATCCCAGGCTGCAGAAATGGCTGCTTCAAAGAGGTTAACAAGGTCTGTAGGTTCACCCAGAATCTCTGAAGCAGGAATTATCAAAAGATTGTATAGGGCGGTGGTGGTTGAGGCCAGTGGATCTGGTGTGCCTGTAAATGAAAGCAAAGCAAATTTGGTAGAAATTTCCATCGTTTCAGAAAGAATTATGTCAACTTTTCAAAATAAGATGCCCGAATTGTCGCATAAAACTGAGGCTGATATACCAAACCAAGGAGCTGAGTCTTCTTCTTCCAAGGATACTGGGGTATCAGAAAAGGCAGGTGTGGATAGATTGATGTCAAAGGATCTTGTTTTTAATACGGCTACTGAGGTGACAAGTATAAAGCCACCTGGTGAGGTGGGAAAACTTAAATCTCCTTCCCTTACTCCTTCTGGTGAGAAGGATCCGGCTGTGAACGGTATGGCTATTTCCTCAACTGAAGATTTGACAAAAAATTCAGTGCCAGAGAAGGAGAGAGGTACAATGGATTGTTTATCTTCTCTATCAAGCTCTGCATCTGTTGTCAGGCCGAACAAATCAGCTTTCAATAATACACGCTTCATCAAACCTATTTTCAGGACCAAGAATTTTGTCAAGAAGAAAGCAAAACTTGAACCAAATTCCTCCCGTAGTATGTCCGATGTCTGCACAGTAACGTTTGACACTGATTTGGCTACCATAGCAGAAAAGTCTGAGAACCAGATGCCAGATAATGCACAGCTTCATGAGATTAAAGAAGAAGATAAATGTTCTTCTGTCTCTAGTAACATAACTTTAGGTGTTGAAGTAAGTGGAAATGTAGGAAACACAGAATCTAGTAGACCTGGTACGTCTCTCAGCTGCTGTAACAGGAACAGACCAACTATTATGCTATCTGATGAGAGATCCAGATCAAGAGAGAAAGGGATGTTCTCTCAGAGCTCTAAAAGTAGTGTTGGTGAATGTAGCAGTAGCCCAAGCATCAGTGGGGAAAGCATTCTCAGTGGATCAAGTCGCAGTGGAGTTCGGCCTCACATGTCAAAAGACTTGAAATGGGAGGCTATCCACCACCTCAAGGATCAACATAAATGCCTAGGTCTGAGAAACTTCAAGCTGCTAAAGAGACTTGGTCTCGGGGACATTGGGACTGTCTATCTCTCTGAGCTTTGCGATTCAAGCTGTCTTTTTGCTATGAAAGTGATGGACAAGGAGTTCTTGGCAAGTAGGAAAAAAATAATTCGGGCACAAACTGAGAGAGAGATACTACAAATGCTTGACCATCCATTTCTCCCTACATTATATGCCCATTTCGAGACGGATAAGCACTCATGCCTTGTCATGGACTACTGTCCTGGTGGAGATCTCCACGTACTGCGACAGAAGCAACCATGCAAGAGTTTCTCTGAGCGTGCAGTCAGGTTCTATGTCGCTGAAGTTCTTCTTGCACTGGAGTACTTGCACATGCTAGGAGTTGTTTATCGCGACCTGAAACCCGAAAACGTCCTGGTCCGAGAAGATGGGCACATCATGCTCACGGACTTTGATTTGTCCCTTAGATGTGCTGTTAACCCAACGCTGCTTCAATCATCATCTCCAGTTGTGGAACCCACTAAGAGGACGTTGAATCCCTGTGATGAATCTAGTTGCATTGACCCTTTCTGCCTCCATCCATCCTGGCAGGTCTCATGCTTCACTCCCAAAGTTCTATCTTCTCCATACAAATCCCGGAGAACGAAAACAGATCATCAGGCTAGTCTATTACCACAGCTTATAGTTGAACCAACAGGTGCACGGTCCAATTCGTTTGTAGGAACCCATGAATACCTCGCTCCTGAGATTGTCAAGGGTGACGGCCATGGGAGCGCTGTTGATTGGTGGACTTATGGGATTTTCCTGTTTGAGCTACTATATGGTAAGACTCCCTTCAAGGGTTCAGGAAATGAGGACACATTAGCGAACATAGTATCCCAAACTCTCAAGTTCCCCGATTGCCCCATAGTTAGTTTTCATGCAAGAGACCTGATCAGATGTCTGCTGACGAAGGAGCCCGAGAACCGATTAGGCTCGACAAAAGGAGCTATCGAGATTAAGCAGCATCCGTTTTTTGAAGGCCTCAATTGGGCTCTAATACGTTGTGCAACACCACCCGAGCTTCCCAAGTTTTTCGACGGTGGAACTAGTGCAATGCCAGTGGATTCTGGGGAGAATACAAAGCGTAGAGATCTCGAAAATATGGAAGCGGATGCAGCAATGTTTGACCTGTTTTAG | 2577 | 44.16 | MTTLASTSEIVESTEEFDSEKAGTSYALDVGKRFSIEDDINRLFQAIDIRTLRKRSSQQREVDKDALRKSAMKRPVRVGSSHMAGIGISEPASLKQALRGLCISQAAEMAASKRLTRSVGSPRISEAGIIKRLYRAVVVEASGSGVPVNESKANLVEISIVSERIMSTFQNKMPELSHKTEADIPNQGAESSSSKDTGVSEKAGVDRLMSKDLVFNTATEVTSIKPPGEVGKLKSPSLTPSGEKDPAVNGMAISSTEDLTKNSVPEKERGTMDCLSSLSSSASVVRPNKSAFNNTRFIKPIFRTKNFVKKKAKLEPNSSRSMSDVCTVTFDTDLATIAEKSENQMPDNAQLHEIKEEDKCSSVSSNITLGVEVSGNVGNTESSRPGTSLSCCNRNRPTIMLSDERSRSREKGMFSQSSKSSVGECSSSPSISGESILSGSSRSGVRPHMSKDLKWEAIHHLKDQHKCLGLRNFKLLKRLGLGDIGTVYLSELCDSSCLFAMKVMDKEFLASRKKIIRAQTEREILQMLDHPFLPTLYAHFETDKHSCLVMDYCPGGDLHVLRQKQPCKSFSERAVRFYVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLTDFDLSLRCAVNPTLLQSSSPVVEPTKRTLNPCDESSCIDPFCLHPSWQVSCFTPKVLSSPYKSRRTKTDHQASLLPQLIVEPTGARSNSFVGTHEYLAPEIVKGDGHGSAVDWWTYGIFLFELLYGKTPFKGSGNEDTLANIVSQTLKFPDCPIVSFHARDLIRCLLTKEPENRLGSTKGAIEIKQHPFFEGLNWALIRCATPPELPKFFDGGTSAMPVDSGENTKRRDLENMEADAAMFDLF | 858 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 36457569 | 36461964 | - | ClCG02G022020.1 | Cla02g02140 | 268266 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla02g02140 | 858 | Gene3D | Phosphorylase Kinase; domain 1 | 471 | 552 | - | - | |
Cla02g02140 | 858 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cla02g02140 | 858 | Gene3D | Transferase(Phosphotransferase) domain 1 | 553 | 621 | - | - | |
Cla02g02140 | 858 | MobiDBLite | consensus disorder prediction | 404 | 446 | - | - | |
Cla02g02140 | 858 | SUPERFAMILY | Protein kinase-like (PK-like) | 448 | 824 | IPR011009 | - | |
Cla02g02140 | 858 | Gene3D | Transferase(Phosphotransferase) domain 1 | 700 | 822 | - | - | |
Cla02g02140 | 858 | MobiDBLite | consensus disorder prediction | 226 | 249 | - | - | |
Cla02g02140 | 858 | MobiDBLite | consensus disorder prediction | 413 | 445 | - | - | |
Cla02g02140 | 858 | ProSiteProfiles | Protein kinase domain profile. | 473 | 805 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g02140 | 858 | CDD | STKc_phototropin_like | 473 | 823 | - | - | |
Cla02g02140 | 858 | PANTHER | FLIPPASE KINASE 1-RELATED | 1 | 838 | - | - | |
Cla02g02140 | 858 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 594 | 606 | IPR008271 | GO:0004672|GO:0006468 | |
Cla02g02140 | 858 | MobiDBLite | consensus disorder prediction | 184 | 199 | - | - | |
Cla02g02140 | 858 | SMART | serkin_6 | 473 | 805 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g02140 | 858 | MobiDBLite | consensus disorder prediction | 179 | 203 | - | - | |
Cla02g02140 | 858 | Pfam | Protein kinase domain | 702 | 805 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g02140 | 858 | Pfam | Protein kinase domain | 474 | 623 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla02g02140 | 858 | PANTHER | SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 | 1 | 838 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g02020 | Cla-Chr2:35196819 | Cla02g02140 | Cla-Chr2:36457569 | 8.59E-114 | dispersed | |
Cla02g02140 | Cla-Chr2:36457569 | Cla05g00012 | Cla-Chr5:159566 | 0 | dispersed | |
Cla02g02140 | Cla-Chr2:36457569 | Cla02g02141 | Cla-Chr2:36474301 | 6.95E-35 | tandem | |
Cla02g02265 | Cla-Chr2:37770052 | Cla02g02140 | Cla-Chr2:36457569 | 6.22E-72 | transposed | |
Cla07g01009 | Cla-Chr7:26461792 | Cla02g02140 | Cla-Chr2:36457569 | 8.14E-110 | transposed | |
Cla09g00796 | Cla-Chr9:8126349 | Cla02g02140 | Cla-Chr2:36457569 | 4.47E-72 | transposed | |
Cla02g02140 | Cla-Chr2:36457569 | Cla04g00971 | Cla-Chr4:24841948 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80386 | PF00069 | Pkinase | 1.20E-36 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla02g02140 | - | - | csv:101206786 | 1507.27 |