Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla02g02141 ATGGAGTCATCTCCCGACGACATCGCCGACGACCTACAAAGCCTCAGCTTCAACTCTACCAACACCAACCGCAGCACAAGCTCCGGCTCCGAGACCACTCTCACCGCCTCCTCCTCCTCCTTTAACATCCCTTCCATTCTCAGCAAGCCCCACGCGCCTTCCTCCGACCCTTGCTGGTCCGCTGTTAACCGGATCCGATCCGAATCTTCGTCTCGTCAACTCGTCTTCTCCGACCTTAAGTTCTTCCACCGTCTTGGCTCTGGCGACATTGGCTCCGTCTACCTCTCCGGCCTCAAGTCCGCTGGAACCGACGGATGTTTGTTTGCAGCGAAGGTAATGGATAAGAAGGAACTAGCGAGTAGGAGTAAAGAAGGCAGAGCAAGGACTGAGAGAGAGATTTTGGAGTCTTTGGACCATCCGTTTCTACCGACGCTCTATGCTAGTATCGACTCGCCGAAGTGGCTCTGTCTCTTGACGGAGTTCTGTCCCGGCGGCGACCTACACGTTCTCCGGCAACGGCAACCTAACAAACGCTTCGATGAACTCGCCATGTGGGCGAGTGTAGACGAAGAGGGGAAAATGCATGCTCTGGGAAAGCGACGATACATGAGAGTGGGCCCACATTCTGACATGACCGGTATGAGGGTCAGAGGTGGGGACCAGCAGGTTGGTCATTGTCGCTTGATGGATTTGAGAGGAATAGGATGTTACTGTGGAACTGCTTGCACTGGATTAACTTTAGCTCTGGTCAGATGCGGCAAAGCCCACGTGAGCTCGAGAGTCGATGTTGTGAGCTCTCCAATAGGGATCCAAATTAGAAGATTCTATGCATCGGAGATAGTGGTTGCTATCGAGTACCTTCACATGATGGGGATTGTTTACCGTGATCTGAAGCCGGAAAATGTACTGGTACGATCGGACGGCCATATCATGCTCACTGATTTTGATCTCTCCTTGAAGTGTGAGGATTCGACGGCGACCCCACAGGTTATCAATGCTAAATATCTGACAAACGGCACCGCCCCGCTAAAGGACTACCAAATTGATGCCCCTCCTTTCACATCATCCTCCTGCATTCTTCCAAACTGTATAGTCCCGGCCGTGTCATGTTTCAACCCAAAACGCAAACGCAAGAAGAAGTCTGGTCACCGTAACGGACCCGAGTTTGTCGCTGAACCGGTTGACGTCCGGTCAATGTCATTTGTTGGCACCCACGAGTACTTGGCCCCGGAGATCGTCTCTGGTGAGGGCCATGGAAGCGCGGTGGACTGGTGGACTCTAGGGGTGTTTGTGTTTGAGTTGTTTTATGGAGTGACACCTTTTAGAGGCATGGACAATGAGCTCACCTTGGCCAACATAGTGGCTAGAGCTCTTGAGTTCCCTAAAGAACCAGCGGTGCCAACGGCAGCGAAGGACCTCATCTCTCAGTTATTGATCAAAGACCCGGCGAGACGGTTGGGATCGACGACAGGGTCGTCGGCAATCAAGCACCATTCATTTTTTCAAGGAGTAAATTGGGCATTATTGAGATGTACGTCGCCACCATTTATTCCACCACCTTTTAGTAGAGAAAAAATTGCATCGGATGAAAGCTGCACAGAGGCTCCAAAGCCGCCTCTTTCCTGTACTTCCCATGGTACACTGTCATCCGTTCCCTGCCTTGGTGTCATCAGAGATGCAGGACAGTCACCAGTTAGTGATAAGGAGTCGATGAACTACAGGGAGGAATTTCTCTGA 1737 51.7 MESSPDDIADDLQSLSFNSTNTNRSTSSGSETTLTASSSSFNIPSILSKPHAPSSDPCWSAVNRIRSESSSRQLVFSDLKFFHRLGSGDIGSVYLSGLKSAGTDGCLFAAKVMDKKELASRSKEGRARTEREILESLDHPFLPTLYASIDSPKWLCLLTEFCPGGDLHVLRQRQPNKRFDELAMWASVDEEGKMHALGKRRYMRVGPHSDMTGMRVRGGDQQVGHCRLMDLRGIGCYCGTACTGLTLALVRCGKAHVSSRVDVVSSPIGIQIRRFYASEIVVAIEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEDSTATPQVINAKYLTNGTAPLKDYQIDAPPFTSSSCILPNCIVPAVSCFNPKRKRKKKSGHRNGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGMDNELTLANIVARALEFPKEPAVPTAAKDLISQLLIKDPARRLGSTTGSSAIKHHSFFQGVNWALLRCTSPPFIPPPFSREKIASDESCTEAPKPPLSCTSHGTLSSVPCLGVIRDAGQSPVSDKESMNYREEFL 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36474301 36479971 + ClCG02G022030.2 Cla02g02141 268267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla02g02141 578 MobiDBLite consensus disorder prediction 9 34 - -
Cla02g02141 578 Gene3D Phosphorylase Kinase; domain 1 71 204 - -
Cla02g02141 578 PANTHER FLIPPASE KINASE 1-RELATED 272 536 - -
Cla02g02141 578 PANTHER FLIPPASE KINASE 1-RELATED 3 184 - -
Cla02g02141 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Cla02g02141 578 Pfam Protein kinase domain 398 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g02141 578 Gene3D Transferase(Phosphotransferase) domain 1 397 519 - -
Cla02g02141 578 Gene3D Transferase(Phosphotransferase) domain 1 273 324 - -
Cla02g02141 578 SMART serkin_6 79 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g02141 578 Pfam Protein tyrosine and serine/threonine kinase 79 325 IPR001245 GO:0004672|GO:0006468
Cla02g02141 578 ProSiteProfiles Protein kinase domain profile. 79 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla02g02141 578 PANTHER OS11G0150700 PROTEIN 3 184 - -
Cla02g02141 578 PANTHER OS11G0150700 PROTEIN 272 536 - -
Cla02g02141 578 SUPERFAMILY Protein kinase-like (PK-like) 57 532 IPR011009 -
Cla02g02141 578 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g02141 Cla-Chr2:36474301 Cla01g01115 Cla-Chr1:18346000 1.76E-36 dispersed
Cla02g02140 Cla-Chr2:36457569 Cla02g02141 Cla-Chr2:36474301 6.95E-35 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80387 PF07714 PK_Tyr_Ser-Thr 4.10E-17 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla02g02141 K08286 - csv:101207262 529.635